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Lipopeptides from Cyanobacteria: Structure and Role in a Trophic Cascade
Lipopeptides from Cyanobacteria : structure and role in a trophic cascade Louis Bornancin To cite this version: Louis Bornancin. Lipopeptides from Cyanobacteria : structure and role in a trophic cascade. Other. Université Montpellier, 2016. English. NNT : 2016MONTT202. tel-02478948 HAL Id: tel-02478948 https://tel.archives-ouvertes.fr/tel-02478948 Submitted on 14 Feb 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Délivré par Université de Montpellier Préparée au sein de l’école doctorale Sciences Chimiques Balard Et de l’unité de recherche Centre de Recherche Insulaire et Observatoire de l’Environnement (USR CNRS-EPHE-UPVD 3278) Spécialité : Ingénierie des Biomolécules Présentée par Louis BORNANCIN Lipopeptides from Cyanobacteria : Structure and Role in a Trophic Cascade Soutenue le 11 octobre 2016 devant le jury composé de Monsieur Ali AL-MOURABIT, DR CNRS, Rapporteur Institut de Chimie des Substances Naturelles Monsieur Gérald CULIOLI, MCF, Rapporteur Université de Toulon Madame Martine HOSSAERT-MCKEY, DR CNRS, Examinatrice, Centre d’Écologie -
JJ Vermeulen
BASTERIA, 71: 209-220, 2007 Bukit Sarang (Sarawak, Malaysia), an isolatedlimestone hill with an extraordinary snail fauna J.J. Vermeulen Nationaal Herbarium, Leiden Branch, P.O. Box 9514, NL 2300 RA Leiden, The Netherlands & D.J. Junau Grand Perfect Sdn Bhd, Lot 3469 & 3470, Parkcity Commerce Square, Jin Tun Ahmad Zaidin, 97008 Bintulu,Sarawak, Malaysia Bukit Sarang is an isolated limestone hill in the Tatau River basin, Sarawak, Malaysia (on the 83 26 island of Borneo). Out of the land snail species found, are assumed to be endemic to the hill. of these described this Nine are as new in paper; they belong tothe Assimineidae (Acmella: 3 species), Cyclophoridae (Japonia: 2 species; Opisthoporus: 1 species), Hydrocenidae (Georissa: 1 species), Camaenidae (Amphidromus: 1 species), Charopidae(Teracharopa: 1 species). Key words; Gastropoda, Caenogastropoda, Pulmonata, Assimineidae, Cyclophoridae, Hydrocenidae, Camaenidae, Charopidae, taxonomy, Malaysia, Borneo. INTRODUCTION hills Sarawak of the island of Limestone (karst) are widespread in (Malaysia, part Borneo), but not equally distributed over the state. Extensive karst is found in the West, between and Serian. the scattered such those Mulu Bau In East, areas occur, as in Gunung NationalPark, Niah Caves National Park, and in the Baram River headwaters. In between East and West Sarawak karst areas are few and far apart. They are restricted to the Tatau River basin: Bukit Sarang downstream, the Ulu Kakus range upstream. Both limestone isolated: the distance between the is about60 the outcrops are extremely two outcrops km, nearest limestone ranges to the SW., NE. and SSE. (in adjacent Kalimantan, Indonesia) of Bukit Sarang are about 325 km, 150 km and 210 km away, respectively. -
Constraints on the Timescale of Animal Evolutionary History
Palaeontologia Electronica palaeo-electronica.org Constraints on the timescale of animal evolutionary history Michael J. Benton, Philip C.J. Donoghue, Robert J. Asher, Matt Friedman, Thomas J. Near, and Jakob Vinther ABSTRACT Dating the tree of life is a core endeavor in evolutionary biology. Rates of evolution are fundamental to nearly every evolutionary model and process. Rates need dates. There is much debate on the most appropriate and reasonable ways in which to date the tree of life, and recent work has highlighted some confusions and complexities that can be avoided. Whether phylogenetic trees are dated after they have been estab- lished, or as part of the process of tree finding, practitioners need to know which cali- brations to use. We emphasize the importance of identifying crown (not stem) fossils, levels of confidence in their attribution to the crown, current chronostratigraphic preci- sion, the primacy of the host geological formation and asymmetric confidence intervals. Here we present calibrations for 88 key nodes across the phylogeny of animals, rang- ing from the root of Metazoa to the last common ancestor of Homo sapiens. Close attention to detail is constantly required: for example, the classic bird-mammal date (base of crown Amniota) has often been given as 310-315 Ma; the 2014 international time scale indicates a minimum age of 318 Ma. Michael J. Benton. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Philip C.J. Donoghue. School of Earth Sciences, University of Bristol, Bristol, BS8 1RJ, U.K. [email protected] Robert J. -
MOLLUSCA Nudibranchs, Pteropods, Gastropods, Bivalves, Chitons, Octopus
UNDERWATER FIELD GUIDE TO ROSS ISLAND & MCMURDO SOUND, ANTARCTICA: MOLLUSCA nudibranchs, pteropods, gastropods, bivalves, chitons, octopus Peter Brueggeman Photographs: Steve Alexander, Rod Budd/Antarctica New Zealand, Peter Brueggeman, Kirsten Carlson/National Science Foundation, Canadian Museum of Nature (Kathleen Conlan), Shawn Harper, Luke Hunt, Henry Kaiser, Mike Lucibella/National Science Foundation, Adam G Marsh, Jim Mastro, Bruce A Miller, Eva Philipp, Rob Robbins, Steve Rupp/National Science Foundation, Dirk Schories, M Dale Stokes, and Norbert Wu The National Science Foundation's Office of Polar Programs sponsored Norbert Wu on an Artist's and Writer's Grant project, in which Peter Brueggeman participated. One outcome from Wu's endeavor is this Field Guide, which builds upon principal photography by Norbert Wu, with photos from other photographers, who are credited on their photographs and above. This Field Guide is intended to facilitate underwater/topside field identification from visual characters. Organisms were identified from photographs with no specimen collection, and there can be some uncertainty in identifications solely from photographs. © 1998+; text © Peter Brueggeman; photographs © Steve Alexander, Rod Budd/Antarctica New Zealand Pictorial Collection 159687 & 159713, 2001-2002, Peter Brueggeman, Kirsten Carlson/National Science Foundation, Canadian Museum of Nature (Kathleen Conlan), Shawn Harper, Luke Hunt, Henry Kaiser, Mike Lucibella/National Science Foundation, Adam G Marsh, Jim Mastro, Bruce A Miller, Eva -
Biography of Augustus Addison Gould
BIOGRAPHICAL MEMOIR AUGUSTUS ADDISON GOULD. 1805-1866. JEFFRIES WYMAN. WITH ADDITIONS BY WILLIAM HEALEY DALL. READ BBFORE THE NATIONAL ACADEMY OF SCIENCES, A PHIL 22, 1903. (8) 91 BIOGRAPHICAL MEMOIR OF AUGUSTUS ADDISON GOULD. The subject of this memoir descended from true pioneer stock and since heredity, especially of men of eminence, has a scien- tific as well as a personal interest, it is well to include here a brief notice of his lineage, derived from family documents. The earliest ancestors noted are Zaccheus Gould, of Boving- don, Herts, England, who emigrated to America about 1638 and died, aged 81, in 1670; and John Durant, or Duren, supposed French Huguenot, who emigrated in November, 1659, and in 1670 married Susannah Dalton. One of the Durens, grandfather of our late associate, was a builder of note and designed a truss bridge which he erected over Pawtucket Falls, near Lowell, Mass., one of the earliest self-supporting bridges built in this country. His son, Nathaniel Gould Duren, was born in Bedford, Mass., in 1781, and when eleven years of age went to live with a maternal uncle at New Ipswich, N. H. This uncle, Nathaniel Gould, adopted his nephew, whose name was changed by legal process to Nathaniel Duren Gould. Young Gould, November 15, 1801, married Sally Andrews Prichard, of Welsh extraction, whose ancestors were among the earliest settlers of Old Rowley, now Boxford, Mass. This marriage was blessed with eight children, three of whom died in infancy. The second child and first survivor, born at New Ipswich, April 23, 1805, was AUGUSTUS ADDTSON GOULD, the subject of this memoir. -
The Role of Body Size in Complex Food Webs: a Cold Case
Provided for non-commercial research and educational use only. Not for reproduction, distribution or commercial use. This chapter was originally published in the book Advances in Ecological Research, Vol. 45 published by Elsevier, and the attached copy is provided by Elsevier for the author's benefit and for the benefit of the author's institution, for non-commercial research and educational use including without limitation use in instruction at your institution, sending it to specific colleagues who know you, and providing a copy to your institution’s administrator. All other uses, reproduction and distribution, including without limitation commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution’s website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier's permissions site at: http://www.elsevier.com/locate/permissionusematerial From: Ute Jacob, Aaron Thierry, Ulrich Brose, Wolf E. Arntz, Sofia Berg, Thomas Brey, Ingo Fetzer, Tomas Jonsson, Katja Mintenbeck, Christian Möllmann, Owen Petchey, Jens O. Riede and Jennifer A. Dunne, The Role of Body Size in Complex Food Webs: A Cold Case. In Andrea Belgrano and Julia Reiss, editors: Advances in Ecological Research, Vol. 45, Amsterdam, The Netherlands, 2011, pp. 181-223. ISBN: 978-0-12-386475-8 © Copyright 2011 Elsevier Ltd. Academic press. Author's personal copy The Role of Body Size in Complex Food Webs: A Cold Case UTE JACOB,1,* AARON THIERRY,2,3 ULRICH BROSE,4 WOLF E. ARNTZ,5 SOFIA BERG,6 THOMAS BREY,5 INGO FETZER,7 TOMAS JONSSON,6 KATJA MINTENBECK,5 CHRISTIAN MO¨ LLMANN,1 OWEN L. -
Download Full Article 1.6MB .Pdf File
Memoirs of the National Museum of Victoria https://doi.org/10.24199/j.mmv.1962.25.10 ADDITIONS TO MARINE MOLLUSCA 177 1 May 1962 ADDITIONS TO THE MARINE MOLLUSCAN FAUNA OF SOUTH EASTERN AUSTRALIA INCLUDING DESCRIPTIONS OF NEW GENUS PILLARGINELLA, SIX NEW SPECIES AND TWO SUBSPECIES. Charles J. Gabriel, Honorary Associate in Gonchology, National Museum of Victoria. Introduction. It has always been my conviction that the spasmodic and haphazard collecting so far undertaken has not exhausted the molluscan species to be found in the deeper waters of South- eastern Australia. Only two large single collections have been made; first by the vessel " Challenger " in 1874 at Station 162 off East Moncoeur Island in 38 fathoms. These collections were described in the " Challenger " reports by Rev. Boog. Watson (Gastropoda) and E. A. Smith (Pelecypoda). In the latter was included a description of a shell Thracia watsoni not since taken in Victoria though dredged by Mr. David Howlett off St. Francis Island, South Australia. In 1910 the F. I. S. " Endeavour " made a number of hauls both north and south of Gabo Island and off Cape Everard. The u results of this collecting can be found in the Endeavour " reports. T. Iredale, 1924, published the results of shore and dredging collections made by Roy Bell. Since this time continued haphazard collecting has been carried out mostly as a hobby by trawler fishermen either for their own interest or on behalf of interested friends. Although some of this material has reached the hands of competent workers, over the years the recording of new species has probably been delayed. -
Phylogeny of the Sea Hares in the Aplysia Clade Based on Mitochondrial DNA Sequence Data
Lawrence Berkeley National Laboratory Lawrence Berkeley National Laboratory Title Phylogeny of the sea hares in the aplysia clade based on mitochondrial DNA sequence data Permalink https://escholarship.org/uc/item/0fv9g804 Authors Medina, Monica Collins, Timothy Walsh, Patrick J. Publication Date 2004-02-20 Peer reviewed eScholarship.org Powered by the California Digital Library University of California PHYLOGENY OF THE SEA HARES IN THE APLYSIA CLADE BASED ON 1,2 MITOCHONDRIAL DNA SEQUENCE DATA MÓNICA MEDINA , TIMOTHY 3 1 COLLINS , AND PATRICK J. WALSH 1 Rosenstiel School of Marine and Atmospheric Science, Division of Marine Biology and Fisheries, University of Miami, 4600 Rickenbacker Causeway, Miami, FL 33149 USA. RUNNING HEAD: Aplysia mitochondrial phylogeny 2 present address: Joint Genome Institute, 2800 Mitchell Drive B400, Walnut Creek, CA 94598 e-mail: [email protected] phone: (925)296-5633 fax: (925)296-5666 3 Department of Biological Sciences, Florida International University, University Park, Miami, FL 33199 USA ABSTRACT Sea hare species within the Aplysia clade are distributed worldwide. Their phylogenetic and biogeographic relationships are, however, still poorly known. New molecular evidence is presented from a portion of the mitochondrial cytochrome oxidase c subunit 1 gene (cox1) that improves our understanding of the phylogeny of the group. Based on these data a preliminary discussion of the present distribution of sea hares in a biogeographic context is put forward. Our findings are consistent with only some aspects of the current taxonomy and nomenclatural changes are proposed. The first, is the use of a rank free classification for the different Aplysia clades and subclades as opposed to previously used genus and subgenus affiliations. -
Faunal Change and Bathymetric Diversity Gradient in Deep-Sea Prosobranchs from Northeastern Atlantic
Biodiversity and Conservation (2006) Ó Springer 2006 DOI 10.1007/s10531-005-1344-9 -1 Faunal change and bathymetric diversity gradient in deep-sea prosobranchs from Northeastern Atlantic CELIA OLABARRIA1,2 1Southampton Oceanography Centre, DEEPSEAS Benthic Biology Group, Empress Dock, South- ampton SO14 3ZH, United Kingdom; 2Present address: Departamento de Ecoloxı´a e Bioloxı´a Animal, Area Ecoloxı´a, Universidad de Vigo, Campus Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain (e-mail: [email protected]; phone: +34-986-812587; fax: +34-986-812556) Received 6 January 2005; accepted in revised form 11 July 2005 Key words: Deep sea, Diversity, Faunal turnover, Northeastern Atlantic, Porcupine Abyssal Plain, Porcupine Seabight, Prosobranchs Abstract. Despite the plethora of studies, geographic patterns of diversity in deep sea remain subject of speculation. This study considers a large dataset to examine the faunal change and depth-diversity gradient of prosobranch molluscs in the Porcupine Seabight and adjacent Abyssal Plain (NE Atlantic). Rates of species succession (addition and loss) increased rapidly with increasing depth and indicated four possible areas of faunal turnover at about 700, 1600, 2800 and 4100 m. Depth was a significant predictor of diversity, explaining nearly a quarter the variance. There was a pattern of decreasing diversity downslope from 250 m to 1500–1600 m, followed by an increase to high values at about 4000 m and then again, a fall to 4915 m. Processes causing diversity patterns of prosobranchs in the Porcupine Seabight and adjacent Abyssal Plain are likely to differ in magnitude or type, from those operating in other Atlantic areas. Introduction An increasing focus for biodiversity research in the deep sea has been to test for the existence of large-scale gradients in the diversity of marine soft- sediment fauna in deep sea (e.g. -
TREATISE ONLINE Number 48
TREATISE ONLINE Number 48 Part N, Revised, Volume 1, Chapter 31: Illustrated Glossary of the Bivalvia Joseph G. Carter, Peter J. Harries, Nikolaus Malchus, André F. Sartori, Laurie C. Anderson, Rüdiger Bieler, Arthur E. Bogan, Eugene V. Coan, John C. W. Cope, Simon M. Cragg, José R. García-March, Jørgen Hylleberg, Patricia Kelley, Karl Kleemann, Jiří Kříž, Christopher McRoberts, Paula M. Mikkelsen, John Pojeta, Jr., Peter W. Skelton, Ilya Tëmkin, Thomas Yancey, and Alexandra Zieritz 2012 Lawrence, Kansas, USA ISSN 2153-4012 (online) paleo.ku.edu/treatiseonline PART N, REVISED, VOLUME 1, CHAPTER 31: ILLUSTRATED GLOSSARY OF THE BIVALVIA JOSEPH G. CARTER,1 PETER J. HARRIES,2 NIKOLAUS MALCHUS,3 ANDRÉ F. SARTORI,4 LAURIE C. ANDERSON,5 RÜDIGER BIELER,6 ARTHUR E. BOGAN,7 EUGENE V. COAN,8 JOHN C. W. COPE,9 SIMON M. CRAgg,10 JOSÉ R. GARCÍA-MARCH,11 JØRGEN HYLLEBERG,12 PATRICIA KELLEY,13 KARL KLEEMAnn,14 JIřÍ KřÍž,15 CHRISTOPHER MCROBERTS,16 PAULA M. MIKKELSEN,17 JOHN POJETA, JR.,18 PETER W. SKELTON,19 ILYA TËMKIN,20 THOMAS YAncEY,21 and ALEXANDRA ZIERITZ22 [1University of North Carolina, Chapel Hill, USA, [email protected]; 2University of South Florida, Tampa, USA, [email protected], [email protected]; 3Institut Català de Paleontologia (ICP), Catalunya, Spain, [email protected], [email protected]; 4Field Museum of Natural History, Chicago, USA, [email protected]; 5South Dakota School of Mines and Technology, Rapid City, [email protected]; 6Field Museum of Natural History, Chicago, USA, [email protected]; 7North -
Mollusca, Bivalvia): Protocardiinae, Laevicardiinae, Lahilliinae, Tulongocardiinae Subfam
Zoologica Scripta, Vol. 24, No. 4, pp. 321-346, 1995 Pergamon Elsevier Science Ltd The Norwegian Academy of Science and Letters Printed in Great Britain 0300-3256(95)00011-9 Phytogeny of the Cardiidae (Mollusca, Bivalvia): Protocardiinae, Laevicardiinae, Lahilliinae, Tulongocardiinae subfam. n. and Pleuriocardiinae subfam. n. JAY A. SCHNEIDER Accepted 7 June 1995 Schneider, J.A. 1995. Phytogeny of the Cardiidae (Mollusca, Bivalvia): Protocardiinae, Laevicar- diinae, Lahilliinae, Tulongocardiinae subfam.n. and Pleuriocardiinae subfam.n.—Zool. Scr. 24: 321-346. In a preliminary cladistic analysis of the bivalve family Cardiidae (Schneider 1992), members of the subfamilies Protocardiinae, Lahilliinae, and Laevicardiinae, plus the genus Nemocardium, were found to be the least derived taxa of cardiids. A cladistic analysis is undertaken of the genera and subgenera of these cardiid taxa, plus several Mesozoic taxa which have never been assigned to any subfamily. The Late Triassic Tulongocardium, which is placed in Tulongocardiinae subfam. n., is the sister taxon to all other cardiids. Protocardiinae is restricted to the genus Protocardia. Most other Mesozoic taxa which have been placed in the Protocardiinae are found to be members of the Lahilliinae. Nemocardium is placed in the Laevicardiinae. Incacardium, Pleuriocardia, and Dochmocardia form a monophyletic group, Pleuriocardiinae subfam. n. Pleuriocardiinae, Laevi- cardiinae, and the remaining members of the Cardiidae (herein informally termed "cucardiids") form a monophyletic group. Jay A. Schneider, Smithsonian Tropical Research Institute, Box2072, Balboa, Republic of Panama. Present address: Department of Geology, Youngstown State University, Youngstown, OH 44555- 3672, C/.S./l. re7..2;6-742-77JJ;Fa%.276-742-/7J4 Introduction Bivalves of the family Cardiidae (cockles and giant clams) Outgroup Palaeocardita originated in the Late Triassic and have a present-day Septocardia diversity of nearly 200 species (Rosewater 1965; Fischer- Protocardia | PROTOCARDIINAE Integricardium I Piette 1977). -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department.