Meruliaceae of Russia. I. Bjerkandera
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Cabalodontia (Meruliaceae), a Novel Genus for Five Fungi Previously Placed in Phlebia
Polish Botanical Journal 49(1): 1–3, 2004 CABALODONTIA (MERULIACEAE), A NOVEL GENUS FOR FIVE FUNGI PREVIOUSLY PLACED IN PHLEBIA MARCIN PIĄTEK Abstract: The new genus Cabalodontia M. Piątek with the type Odontia queletii Bourdot & Galzin is described, and new com- binations C. bresadolae (Parmasto) M. Piątek, C. cretacea (Romell ex Bourdot & Galzin) M. Piątek, C. livida (Burt) M. Piątek, C. queletii (Bourdot & Galzin) M. Piątek and C. subcretacea (Litsch.) M. Piątek are proposed. The new genus belongs to Meruliaceae P. Karst. and is closely related to Phlebia Fr. Key words: Cabalodontia, Phlebia, Steccherinum, Irpex, Meruliaceae, new genus, corticoid fungi, taxonomy Marcin Piątek, Department of Mycology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512 Kraków, Poland; e-mail: [email protected] The generic placement of Odontia queletii Bourdot genera should be accepted as subgenera or sections & Galzin has been much debated, and the spe- within Irpex. In addition to Flavodon, Flaviporus cies has had a very unstable taxonomic position. and Junghuhnia, Kotiranta and Saarenoksa (2002) Christiansen (1960) combined it into Phlebia Fr. as transferred to Irpex species of Steccherinum that Phlebia queletii (Bourdot & Galzin) M. P. Christ., possess a dimitic hyphal system, including Parmasto (1968) transferred the species to the genus Hydnum ochraceum Pers., the generitype of Stec- Metulodontia Parmasto as Metulodontia queletii cherinum (Maas Geesteranus 1974). Irpex is now (Bourdot & Galzin) Parmasto, and fi nally Hal- defi ned as a genus possessing a dimitic hyphal lenberg and Hjortstam (1988) reallocated Odontia system, with simple septate or clamped generative queletii to Steccherinum Gray as Steccherinum hyphae, relatively small spores, large encrusted queletii (Bourdot & Galzin) Hallenb. -
Molecular Phylogeny of Laetiporus and Other Brown Rot Polypore Genera in North America
Mycologia, 100(3), 2008, pp. 417–430. DOI: 10.3852/07-124R2 # 2008 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular phylogeny of Laetiporus and other brown rot polypore genera in North America Daniel L. Lindner1 Key words: evolution, Fungi, Macrohyporia, Mark T. Banik Polyporaceae, Poria, root rot, sulfur shelf, Wolfiporia U.S.D.A. Forest Service, Madison Field Office of the extensa Northern Research Station, Center for Forest Mycology Research, One Gifford Pinchot Drive, Madison, Wisconsin 53726 INTRODUCTION The genera Laetiporus Murrill, Leptoporus Que´l., Phaeolus (Pat.) Pat., Pycnoporellus Murrill and Wolfi- Abstract: Phylogenetic relationships were investigat- poria Ryvarden & Gilb. contain species that possess ed among North American species of Laetiporus, simple septate hyphae, cause brown rots and produce Leptoporus, Phaeolus, Pycnoporellus and Wolfiporia annual, polyporoid fruiting bodies with hyaline using ITS, nuclear large subunit and mitochondrial spores. These shared morphological and physiologi- small subunit rDNA sequences. Members of these cal characters have been considered important in genera have poroid hymenophores, simple septate traditional polypore taxonomy (e.g. Gilbertson and hyphae and cause brown rots in a variety of substrates. Ryvarden 1986, Gilbertson and Ryvarden 1987, Analyses indicate that Laetiporus and Wolfiporia are Ryvarden 1991). However recent molecular work not monophyletic. All North American Laetiporus indicates that Laetiporus, Phaeolus and Pycnoporellus species formed a well supported monophyletic group fall within the ‘‘Antrodia clade’’ of true polypores (the ‘‘core Laetiporus clade’’ or Laetiporus s.s.) with identified by Hibbett and Donoghue (2001) while the exception of L. persicinus, which showed little Leptoporus and Wolfiporia fall respectively within the affinity for any genus for which sequence data are ‘‘phlebioid’’ and ‘‘core polyporoid’’ clades of true available. -
The Use of Algae and Fungi for Removal of Pharmaceuticals by Bioremediation and Biosorption Processes: a Review
Review The Use of Algae and Fungi for Removal of Pharmaceuticals by Bioremediation and Biosorption Processes: A Review Andreia Silva, Cristina Delerue-Matos, Sónia A. Figueiredo and Olga M. Freitas * REQUIMTE/LAQV, Instituto Superior de Engenharia do Porto, Rua Dr. António Bernardino de Almeida 431, 4200-072 Porto, Portugal * Correspondence: [email protected] Received: 3 July 2019; Accepted: 25 July 2019; Published: 27 July 2019 Abstract: The occurrence and fate of pharmaceuticals in the aquatic environment is recognized as one of the emerging issues in environmental chemistry. Conventional wastewater treatment plants (WWTPs) are not designed to remove pharmaceuticals (and their metabolites) from domestic wastewaters. The treatability of pharmaceutical compounds in WWTPs varies considerably depending on the type of compound since their biodegradability can differ significantly. As a consequence, they may reach the aquatic environment, directly or by leaching of the sludge produced by these facilities. Currently, the technologies under research for the removal of pharmaceuticals, namely membrane technologies and advanced oxidation processes, have high operation costs related to energy and chemical consumption. When chemical reactions are involved, other aspects to consider include the formation of harmful reaction by-products and the management of the toxic sludge produced. Research is needed in order to develop economic and sustainable treatment processes, such as bioremediation and biosorption. The use of low-cost materials, such as biological matrices (e.g., algae and fungi), has advantages such as low capital investment, easy operation, low operation costs, and the non-formation of degradation by-products. An extensive review of existing research on this subject is presented. -
Oxalic Acid Degradation by a Novel Fungal Oxalate Oxidase from Abortiporus Biennis Marcin Grąz1*, Kamila Rachwał2, Radosław Zan2 and Anna Jarosz-Wilkołazka1
Vol. 63, No 3/2016 595–600 http://dx.doi.org/10.18388/abp.2016_1282 Regular paper Oxalic acid degradation by a novel fungal oxalate oxidase from Abortiporus biennis Marcin Grąz1*, Kamila Rachwał2, Radosław Zan2 and Anna Jarosz-Wilkołazka1 1Department of Biochemistry, Maria Curie-Skłodowska University, Lublin, Poland; 2Department of Genetics and Microbiology, Maria Curie-Skłodowska University, Lublin, Poland Oxalate oxidase was identified in mycelial extracts of a to formic acid and carbon dioxide (Mäkelä et al., 2002). basidiomycete Abortiporus biennis strain. Intracellular The degradation of oxalate via action of oxalate oxidase enzyme activity was detected only after prior lowering (EC 1.2.3.4), described in our study, is atypical for fun- of the pH value of the fungal cultures by using oxalic or gi and was found predominantly in higher plants. The hydrochloric acids. This enzyme was purified using size best characterised oxalate oxidase originates from cereal exclusion chromatography (Sephadex G-25) and ion-ex- plants (Dunwell, 2000). Currently, only three oxalate oxi- change chromatography (DEAE-Sepharose). This enzyme dases of basidiomycete fungi have been described - an exhibited optimum activity at pH 2 when incubated at enzyme from Tilletia contraversa (Vaisey et al., 1961), the 40°C, and the optimum temperature was established at best characterised so far enzyme from Ceriporiopsis subver- 60°C. Among the tested organic acids, this enzyme ex- mispora (Aguilar et al., 1999), and an enzyme produced by hibited specificity only towards oxalic acid. Molecular Abortiporus biennis (Grąz et al., 2009). The enzyme from mass was calculated as 58 kDa. The values of Km for oxa- C. -
Wood Decay by Inonotus Rickii and Bjerkandera Adusta: a Micro- and Ultra-Structural Approach
IAWARobles Journal et al.35 – (1), Wood 2014: decay 51–60 51 WOOD DECAY BY INONOTUS RICKII AND BJERKANDERA ADUSTA: A MICRO- AND ULTRA-STRUCTURAL APPROACH Carolina Analía Robles1,*, María Agueda Castro2 and Silvia Edith Lopez1 1PROPLAME-PRHIDEB-CONICET & 2Laboratorio de Anatomía Vegetal Aplicada, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, PB II, 4to piso, CP 1428EHA Ciudad Autónoma de Buenos Aires, Argentina *Corresponding author; e-mail: [email protected] ABSTRACT Bjerkandera adusta (Willd.) P. Karst. and Inonotus rickii (Pat.) D.A. Reid. are important xylophagous fungi affecting street trees in Buenos Aires City, Ar- gentina. The objective of this paper is to describe the decay patterns produced by these species in London plane wood (Platanus acerifolia (Ait.) Willd.), which is one of the most abundant tree species in the city, through light microscopy (LM), scanning electron microscopy (SEM) and transmission electron microscopy (TEM). A better knowledge of the decay patterns of these fungi at early stages would provide useful information for optimizing tree management programs. Microscopic observations showed that B. adusta, having caused an important loss of dry weight, showed more extensive degradation of wood after three months than I. rickii, affecting mainly fiber walls with potential consequences in tree strength and stiffness. Inonotus rickii, on the other hand, selectively af- fected vessel walls and middle lamellae between fibers. Rays remained virtually unaltered in all decayed wood. Keywords: Wood-rotting fungi, white rot, delignification, Platanus acerifolia. INTRODUCTION White-rot fungi remove lignin, cellulose and hemicelluloses from wood. -
Hori Et Al 2013.Pdf
Mycologia, 105(6), 2013, pp. 1412–1427. DOI: 10.3852/13-072 # 2013 by The Mycological Society of America, Lawrence, KS 66044-8897 Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay Chiaki Hori cellulases belonging to families GH6, GH7, GH9 Department of Biomaterials Sciences, Graduate School of and carbohydrate-binding module family CBM1 are Agricultural and Life Sciences, University of Tokyo, l-l-l, lacking in genomes of brown-rot polyporales. In Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan, and Institute for Microbial and Biochemical Technology, addition, the presence of CDH and the expansion Forest Products Laboratory, 1 Gifford Pinchot Drive, of LPMO were observed only in white-rot genomes. Madison, Wisconsin 53726 Indeed, GH6, GH7, CDH and LPMO peptides were identified only in white-rot polypores. Genes encod- Jill Gaskell ing aldose 1-epimerase (ALE), previously detected Institute for Microbial and Biochemical Technology, Forest Products Laboratory, 1 Gifford Pinchot Drive, with CDH and cellulases in the culture filtrates, also Madison, Wisconsin 53726 were identified in white-rot genomes, suggesting a physiological connection between ALE, CDH, cellu- Kiyohiko Igarashi lase and possibly LPMO. For hemicellulose degrada- Masahiro Samejima tion, genes and peptides corresponding to GH74 Department of Biomaterials Sciences, Graduate School of Agricultural and Life Sciences, University of Tokyo, l-l-l, xyloglucanase, GH10 endo-xylanase, GH79 b-glucu- Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan ronidase, CE1 acetyl xylan esterase and CE15 glucur- onoyl methylesterase were significantly increased in David Hibbett white-rot genomes compared to brown-rot genomes. -
Three Species of Wood-Decaying Fungi in <I>Polyporales</I> New to China
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 Mycotaxon, Ltd. ©2017 January–March 2017—Volume 132, pp. 29–42 http://dx.doi.org/10.5248/132.29 Three species of wood-decaying fungi in Polyporales new to China Chang-lin Zhaoa, Shi-liang Liua, Guang-juan Ren, Xiao-hong Ji & Shuanghui He* Institute of Microbiology, Beijing Forestry University, No. 35 Qinghuadong Road, Haidian District, Beijing 100083, P.R. China * Correspondence to: [email protected] Abstract—Three wood-decaying fungi, Ceriporiopsis lagerheimii, Sebipora aquosa, and Tyromyces xuchilensis, are newly recorded in China. The identifications were based on morphological and molecular evidence. The phylogenetic tree inferred from ITS+nLSU sequences of 49 species of Polyporales nests C. lagerheimii within the phlebioid clade, S. aquosa within the gelatoporia clade, and T. xuchilensis within the residual polyporoid clade. The three species are described and illustrated based on Chinese material. Key words—Basidiomycota, polypore, taxonomy, white rot fungus Introduction Wood-decaying fungi play a key role in recycling nutrients of forest ecosystems by decomposing cellulose, hemicellulose, and lignin of the plant cell walls (Floudas et al. 2015). Polyporales, a large order in Basidiomycota, includes many important genera of wood-decaying fungi. Recent molecular studies employing multi-gene datasets have helped to provide a phylogenetic overview of Polyporales, in which thirty-four valid families are now recognized (Binder et al. 2013). The diversity of wood-decaying fungi is very high in China because of the large landscape ranging from boreal to tropical zones. More than 1200 species of wood-decaying fungi have been found in China (Dai 2011, 2012), and some a Chang-lin Zhao and Shi-liang Liu contributed equally to this work and share first-author status 30 .. -
Inonotus Obliquus) Mushroom: a Review
Journal of International Society for Food Bioactives Nutraceuticals and Functional Foods Review J. Food Bioact. 2020;12:9–75 Bioactive compounds and bioactive properties of chaga (Inonotus obliquus) mushroom: a review Han Peng and Fereidoon Shahidi* Department of Biochemistry, Memorial University of Newfoundland, St. John’s, NL, Canada A1B 3X9 *Corresponding author: Fereidoon Shahidi Department of Biochemistry, Memorial University of Newfoundland, St. John’s, NL, Canada A1B 3X9. Tel: (709)864-8552; E-mail: [email protected] DOI: 10.31665/JFB.2020.12245 Received: December 04, 2020; Revised received & accepted: December 24, 2020 Citation: Peng, H., and Shahidi, F. (2020). Bioactive compounds and bioactive properties of chaga (Inonotus obliquus) mushroom: a review. J. Food Bioact. 12: 9–75. Abstract Chaga (Inonotus obliquus) is an edible herbal mushroom extensively distributed in the temperate to frigid regions of the Northern hemisphere, especially the Baltic and Siberian areas. Chaga parasites itself on the trunk of various angiosperms, especially birch tree, for decades and grows to be a shapeless black mass. The medicinal/nutraceuti- cal use of chaga mushroom has been recorded in different ancient cultures of Ainu, Khanty, First Nations, and other Indigenous populations. To date, due to its prevalent use as folk medicine/functional food, a plethora of studies on bioactive compounds and corresponding compositional analysis has been conducted in the past 20 years. In this con- tribution, various nutraceutical and pharmaceutical potential, including antioxidant, anti-inflammatory, anti-tumor, immunomodulatory, antimutagenic activity, anti-virus, analgesic, antibacterial, antifungal, anti-hyperglycemic, and anti-hyperuricemia activities/effects, as well as main bioactive compounds including phenolics, terpenoids, polysac- charides, fatty acids, and alkaloids of chaga mushroom have been thoroughly reviewed, and tabulated using a total 171 original articles. -
Identification and Tracking Activity of Fungus from the Antarctic Pole on Antagonistic of Aquatic Pathogenic Bacteria
INTERNATIONAL JOURNAL OF AGRICULTURE & BIOLOGY ISSN Print: 1560–8530; ISSN Online: 1814–9596 19F–079/2019/22–6–1311–1319 DOI: 10.17957/IJAB/15.1203 http://www.fspublishers.org Full Length Article Identification and Tracking Activity of Fungus from the Antarctic Pole on Antagonistic of Aquatic Pathogenic Bacteria Chuner Cai1,2,3, Haobing Yu1, Huibin Zhao2, Xiaoyu Liu1*, Binghua Jiao1 and Bo Chen4 1Department of Biochemistry and Molecular Biology, College of Basic Medicine, Naval Medical University, Shanghai, 200433, China 2College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China 3Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Lianyungang, Jiangsu, 222005, China 4Polar Research Institute of China, Shanghai, 200136, China *For correspondence: [email protected] Abstract To seek the lead compound with the activity of antagonistic aquatic pathogenic bacteria in Antarctica fungi, the work identified species of a previously collected fungus with high sensitivity to Aeromonas hydrophila ATCC7966 and Streptococcus agalactiae. Potential active compounds were separated from fermentation broth by activity tracking and identified in structure by spectrum. The results showed that this fungus had common characteristics as Basidiomycota in morphology. According to 18S rDNA and internal transcribed space (ITS) DNA sequencing, this fungus was identified as Bjerkandera adusta in family Meruliaceae. Two active compounds viz., veratric acid and erythro-1-(3, 5-dichlone-4- methoxyphenyl)-1, 2-propylene glycol were identified by nuclear magnetic resonance spectrum and mass spectrum. Veratric acid was separated for the first time from any fungus, while erythro-1-(3, 5-dichlone-4-methoxyphenyl)-1, 2-propylene glycol was once reported in Bjerkandera. -
Basidiomycetes Inhabiting the Ornamental Tree Catalpa (Bignoniaceae)
©Österreichische Mykologische Gesellschaft, Austria, download unter www.biologiezentrum.at Österr. Z. Pilzk. 19(2010) Basidiomycetes inhabiting the ornamental tree Catalpa (Bignoniaceae) JURAJ PACLT Nam Benku, Martina 24/4083 81107 Bratislava 1, Slovakia Accepted 11. 1.2010 Key words: Basidiomycetes. - Fungus-host associations, Catalpa. Abstract: Attention is paid to all basidiomycetous species hitherto known to occur on Catalpa as host plant. During 1955-1997 more than 20 new fungus-host associations from diverse species of Catalpa grown in Europe could be found by the author. Zusammenfassung: Basidiomyzeten, die bisher von Catalpa als Wirtspflanze bekannt sind, werden aufgeführt. Dem Autor gelang es, 1955-1997 mehr als zwanzig neue Pilz-Wirt-Assoziationen von ver- schiedenen in Europa angepflanzten Catalpa-Artcn zu finden. Catalpa SCOP. (Bignoniaceae), called cigar-tree in the USA, a genus native to the United States of America [Southern Catalpa = C. hignonioides WALTER, Hardy Ca- talpa = C. speciosa (WARDER ex BARNEY) ENGELM.], West Indies and/or China. Common species of the genus are favoured as ornamental trees due to their showy panicles of flowers and long cigar-like pendent capsular fruits as well. In Europe, spe- cies of Catalpa are often cultivated as park- and street-trees. OUDEMANS (1923) mentioned only four species of Basidiomycetes for Catalpa, i.e., Polyponts distortus (= Abortipoms biennis). Pistil/aha mucedina. Pistil/aria mucoroides, and Polyponis distinctus (nomen dubium). Six further basidiomycetous species collected on Catalpa were listed in the next host index by SEYMOUR (1929): Exidia saccharina, Polyponis adustus (= Bjerkandera adusta), Schizophyllum commune, Stereum albobadium (= Dendrophora alhobadia), Stereum versicolor, and Trametes sepium (= Antrodia al- bida). -
Bibliotheksliste-Aarau-Dezember 2016
Bibliotheksverzeichnis VSVP + Nur im Leesesaal verfügbar, * Dissert. Signatur Autor Titel Jahrgang AKB Myc 1 Ricken Vademecum für Pilzfreunde. 2. Auflage 1920 2 Gramberg Pilze der Heimat 2 Bände 1921 3 Michael Führer für Pilzfreunde, Ausgabe B, 3 Bände 1917 3 b Michael / Schulz Führer für Pilzfreunde. 3 Bände 1927 3 Michael Führer für Pilzfreunde. 3 Bände 1918-1919 4 Dumée Nouvel atlas de poche des champignons. 2 Bände 1921 5 Maublanc Les champignons comestibles et vénéneux. 2 Bände 1926-1927 6 Negri Atlante dei principali funghi comestibili e velenosi 1908 7 Jacottet Les champignons dans la nature 1925 8 Hahn Der Pilzsammler 1903 9 Rolland Atlas des champignons de France, Suisse et Belgique 1910 10 Crawshay The spore ornamentation of the Russulas 1930 11 Cooke Handbook of British fungi. Vol. 1,2. 1871 12/ 1,1 Winter Die Pilze Deutschlands, Oesterreichs und der Schweiz.1. 1884 12/ 1,5 Fischer, E. Die Pilze Deutschlands, Oesterreichs und der Schweiz. Abt. 5 1897 13 Migula Kryptogamenflora von Deutschland, Oesterreich und der Schweiz 1913 14 Secretan Mycographie suisse. 3 vol. 1833 15 Bourdot / Galzin Hymenomycètes de France (doppelt) 1927 16 Bigeard / Guillemin Flore des champignons supérieurs de France. 2 Bände. 1913 17 Wuensche Die Pilze. Anleitung zur Kenntnis derselben 1877 18 Lenz Die nützlichen und schädlichen Schwämme 1840 19 Constantin / Dufour Nouvelle flore des champignons de France 1921 20 Ricken Die Blätterpilze Deutschlands und der angr. Länder. 2 Bände 1915 21 Constantin / Dufour Petite flore des champignons comestibles et vénéneux 1895 22 Quélet Les champignons du Jura et des Vosges. P.1-3+Suppl.