Long-Term Effects of Competition on Coral Growth and Sweeper Tentacle Development
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Genetic Variation in Heat Tolerance of the Coral Platygyra Daedalea Offers the Potential for 2 Adaptation to Ocean Warming
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.13.337089; this version posted October 17, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Title: Genetic variation in heat tolerance of the coral Platygyra daedalea offers the potential for 2 adaptation to ocean warming. 3 4 Running head: Genetics of corals’ heat tolerance 5 6 Holland Elder1* 7 Virginia Weis1 8 Jose Montalvo-Proano2,3 9 Veronique J.L Mocellin2 10 Andrew H. Baird3 11 Eli Meyer1, 4 12 Line K. Bay2, 4 13 14 1. Oregon State University, Corvallis, OR, USA. 97331 15 2. Australian Institute of Marine Science, 1526 Cape Cleveland Road, Cape Cleveland 16 4810, Queensland, Australia 17 AIMS@JCU 18 3. ARC Centre of Excellence for Coral Reef Studies, James Cook University, 1 James Cook 19 Dr, Douglas QLD 4814, Australia 20 4. These authors contributed equally 21 22 *corresponding author 23 760-622-9116 24 [email protected] 25 26 Keywords: coral reefs; resilience, heritability, genomic markers, allele frequency change 27 28 Paper type: Primary research article. 29 Global Change Biology 30 bioRxiv preprint doi: https://doi.org/10.1101/2020.10.13.337089; this version posted October 17, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 31 Abstract 32 Reef-building corals are foundational species in coral reef ecosystems and are threatened 33 by many stressors including rising ocean temperatures. -
(Symbiodinium) in Scleractinian Corals from Tropical Reefs in Southern Hainan
Journal of Systematics and Evolution 49 (6): 598–605 (2011) doi: 10.1111/j.1759-6831.2011.00161.x Research Article Low genetic diversity of symbiotic dinoflagellates (Symbiodinium) in scleractinian corals from tropical reefs in southern Hainan Island, China 1,2Guo-Wei ZHOU 1,2Hui HUANG∗ 1(Key Laboratory of Marine Bio-resources Sustainable Utilization, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China) 2(Tropical Marine Biological Research Station in Hainan, Chinese Academy of Sciences, Sanya 572000, China) Abstract Endosymbiotic dinoflagellates in the genus Symbiodinium are among the most abundant and important group of photosynthetic protists found in coral reef ecosystems. In order to further characterize this diversity and compare with other regions of the Pacific, samples from 44 species of scleractinian corals representing 20 genera and 9 families, were collected from tropical reefs in southern Hainan Island, China. Denaturing gradient gel electrophoresis fingerprinting of the ribosomal internal transcribed spacer 2 identified 11 genetically distinct Symbiodinium types that have been reported previously. The majority of reef-building coral species (88.6%) harbored only one subcladal type of symbiont, dominated by host-generalist C1 and C3, and was influenced little by the host’s apparent mode of symbiont acquisition. Some species harbored more than one clade of Symbiodinium (clades C, D) concurrently. Although geographically isolated from the rest of the Pacific, the symbiont diversity in southern Hainan Island was relatively low and similar to both the Great Barrier Reef and Hawaii symbiont assemblages (dominated by clade C Symbiodinium). These results indicate that a specialist symbiont is not a prerequisite for existence in remote and isolated areas, but additional work in other geographic regions is necessary to test this idea. -
Checklist of Fish and Invertebrates Listed in the CITES Appendices
JOINTS NATURE \=^ CONSERVATION COMMITTEE Checklist of fish and mvertebrates Usted in the CITES appendices JNCC REPORT (SSN0963-«OStl JOINT NATURE CONSERVATION COMMITTEE Report distribution Report Number: No. 238 Contract Number/JNCC project number: F7 1-12-332 Date received: 9 June 1995 Report tide: Checklist of fish and invertebrates listed in the CITES appendices Contract tide: Revised Checklists of CITES species database Contractor: World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 ODL Comments: A further fish and invertebrate edition in the Checklist series begun by NCC in 1979, revised and brought up to date with current CITES listings Restrictions: Distribution: JNCC report collection 2 copies Nature Conservancy Council for England, HQ, Library 1 copy Scottish Natural Heritage, HQ, Library 1 copy Countryside Council for Wales, HQ, Library 1 copy A T Smail, Copyright Libraries Agent, 100 Euston Road, London, NWl 2HQ 5 copies British Library, Legal Deposit Office, Boston Spa, Wetherby, West Yorkshire, LS23 7BQ 1 copy Chadwick-Healey Ltd, Cambridge Place, Cambridge, CB2 INR 1 copy BIOSIS UK, Garforth House, 54 Michlegate, York, YOl ILF 1 copy CITES Management and Scientific Authorities of EC Member States total 30 copies CITES Authorities, UK Dependencies total 13 copies CITES Secretariat 5 copies CITES Animals Committee chairman 1 copy European Commission DG Xl/D/2 1 copy World Conservation Monitoring Centre 20 copies TRAFFIC International 5 copies Animal Quarantine Station, Heathrow 1 copy Department of the Environment (GWD) 5 copies Foreign & Commonwealth Office (ESED) 1 copy HM Customs & Excise 3 copies M Bradley Taylor (ACPO) 1 copy ^\(\\ Joint Nature Conservation Committee Report No. -
Volume 2. Animals
AC20 Doc. 8.5 Annex (English only/Seulement en anglais/Únicamente en inglés) REVIEW OF SIGNIFICANT TRADE ANALYSIS OF TRADE TRENDS WITH NOTES ON THE CONSERVATION STATUS OF SELECTED SPECIES Volume 2. Animals Prepared for the CITES Animals Committee, CITES Secretariat by the United Nations Environment Programme World Conservation Monitoring Centre JANUARY 2004 AC20 Doc. 8.5 – p. 3 Prepared and produced by: UNEP World Conservation Monitoring Centre, Cambridge, UK UNEP WORLD CONSERVATION MONITORING CENTRE (UNEP-WCMC) www.unep-wcmc.org The UNEP World Conservation Monitoring Centre is the biodiversity assessment and policy implementation arm of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organisation. UNEP-WCMC aims to help decision-makers recognise the value of biodiversity to people everywhere, and to apply this knowledge to all that they do. The Centre’s challenge is to transform complex data into policy-relevant information, to build tools and systems for analysis and integration, and to support the needs of nations and the international community as they engage in joint programmes of action. UNEP-WCMC provides objective, scientifically rigorous products and services that include ecosystem assessments, support for implementation of environmental agreements, regional and global biodiversity information, research on threats and impacts, and development of future scenarios for the living world. Prepared for: The CITES Secretariat, Geneva A contribution to UNEP - The United Nations Environment Programme Printed by: UNEP World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge CB3 0DL, UK © Copyright: UNEP World Conservation Monitoring Centre/CITES Secretariat The contents of this report do not necessarily reflect the views or policies of UNEP or contributory organisations. -
Universiti Putra Malaysia Ecology of Scleractinian
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Universiti Putra Malaysia Institutional Repository UNIVERSITI PUTRA MALAYSIA ECOLOGY OF SCLERACTINIAN CORALS IN THE WATERS OF PORT DICKSON AND THEIR TOLERANCE TO SEDIMENTATION LEE YOKE LEE FSAS 2005 1 ECOLOGY OF SCLERACTINIAN CORALS IN THE WATERS OF PORT DICKSON AND THEIR TOLERANCE TO SEDIMENTATION By LEE YOKE LEE Thesis Submitted to the School of Graduate Studies, Universiti Putra Malaysia, in Fulfillment of the Requirements for the Degree of Master of Science January 2005 This thesis is dedicated to my beloved parents and brothers I love you Mom, Dad, Sherman and Sherwin. ii Abstract of thesis presented to the Senate of Universiti Putra Malaysia in fulfillment of the requirement for the degree of Master of Science ECOLOGY OF SCLERACTINIAN CORALS IN THE WATERS OF PORT DICKSON AND THEIR TOLERANCE TO SEDIMENTATION By LEE YOKE LEE January 2005 Chairman: Professor Mohd. Ibrahim Haji Mohamed, Ph.D Faculty: Environmental Studies This study was conducted in two parts, field data collection and laboratory experiments. Coral reef surveys were done using Line Intercept Transect and Random Sampling Method while an 8-month sedimentation rate monitoring programme was conducted along the coast of Port Dickson at Batu 7, 8, 9 and Tanjung Tuan using sediment traps. Laboratory experiments were conducted on 12 specimens of Porites lutea and Favites abdita respectively using the Buoyant Weighing Technique to monitor coral growth rates during Suspended Sediment Experiments (SSEs). The corals were also subjected to burial experiments to estimate their sediment tolerance and sediment rejection abilities. -
Molecular Phylogeny of Scleractinian Corals From
Huang et al. BMC Evolutionary Biology 2011, 11:37 http://www.biomedcentral.com/1471-2148/11/37 RESEARCH ARTICLE Open Access Cleaning up the ‘Bigmessidae’: Molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae and Trachyphylliidae Danwei Huang1,2*, Wilfredo Y Licuanan3, Andrew H Baird4, Hironobu Fukami5 Abstract Background: Molecular phylogenetic studies on scleractinian corals have shown that most taxa are not reflective of their evolutionary histories. Based principally on gross morphology, traditional taxonomy suffers from the lack of well-defined and homologous characters that can sufficiently describe scleractinian diversity. One of the most challenging clades recovered by recent analyses is ‘Bigmessidae’, an informal grouping that comprises four conventional coral families, Faviidae, Merulinidae, Pectiniidae and Trachyphylliidae, interspersed among one another with no apparent systematic pattern. There is an urgent need for taxonomic revisions in this clade, but it is vital to first establish phylogenetic relationships within the group. In this study, we reconstruct the evolutionary history of ‘Bigmessidae’ based on five DNA sequence markers gathered from 76 of the 132 currently recognized species collected from five reef regions in the central Indo-Pacific and the Atlantic. Results: We present a robust molecular phylogeny of ‘Bigmessidae’ based on the combined five-gene data, achieving a higher degree of resolution compared to previous analyses. Two Pacific species presumed to be in ‘Bigmessidae’ are more closely related to outgroup clades, suggesting that other unsampled taxa have unforeseen affinities. As expected, nested within ‘Bigmessidae’ are four conventional families as listed above, and relationships among them generally corroborate previous molecular analyses. Our more resolved phylogeny supports a close association of Hydnophora (Merulinidae) with Favites + Montastraea (Faviidae), rather than with the rest of Merulinidae, i.e., Merulina and Scapophyllia. -
On the Current Status of Coastal Marine Biodiversity in Malaysia
Indian Journal of Marine Sciences Vol. 34(1), March 2005, pp. 76-87 On the current status of coastal marine biodiversity in Malaysia *A G Mazlan, C C Zaidi, W M Wan-Lotfi & B H R Othman School of Environmental and Natural Resource Science, National University of Malaysia, 43600 Bangi, Selangor, Malaysia *[E-mail: [email protected]] Received 1 April 2004; revised 13 July 2004 The seas surrounding Malaysia is one of the largest continental shelf areas in the world contain very productive and diverse habitat and should therefore be the centre for marine biological research and data collection. Though there have been some studies on marine biodiversity dated back to mid 30's, the data collection and information gathered are however far from satisfaction. The process of data collection is in progress by time and though the process of mega-biodiversity recording is somehow jeopardized by inadequacy of taxonomists in the country. Nevertheless, the status of marine biodiversity studies around Malaysian waters is examined towards a better approach for future prospects in research and management of this valuable yet fragile ecosystem. [Key words: Marine flora, fauna, coastal diversity, Malaysia] 1.0 Introduction to rainforest in species richness. This mega diversity Malaysia (1-8oN; 100-119oE), comprising Peninsular is a result of careful sharing of a reef by all its Malaysia, Sabah and Sarawak, is located in the Indo- inhabitants. They provide the fish, mollusks and Pacific region that is also includes sea areas crustaceans on which many coastal communities surrounding Indonesia and the Philippines. Peninsular depend on and, with other coastal habitats, provide Malaysia is bounded by seas on all sides except in the nutrients and breeding grounds for many commercial north where it is connected to the Asian mainland via species3. -
The Earliest Diverging Extant Scleractinian Corals Recovered by Mitochondrial Genomes Isabela G
www.nature.com/scientificreports OPEN The earliest diverging extant scleractinian corals recovered by mitochondrial genomes Isabela G. L. Seiblitz1,2*, Kátia C. C. Capel2, Jarosław Stolarski3, Zheng Bin Randolph Quek4, Danwei Huang4,5 & Marcelo V. Kitahara1,2 Evolutionary reconstructions of scleractinian corals have a discrepant proportion of zooxanthellate reef-building species in relation to their azooxanthellate deep-sea counterparts. In particular, the earliest diverging “Basal” lineage remains poorly studied compared to “Robust” and “Complex” corals. The lack of data from corals other than reef-building species impairs a broader understanding of scleractinian evolution. Here, based on complete mitogenomes, the early onset of azooxanthellate corals is explored focusing on one of the most morphologically distinct families, Micrabaciidae. Sequenced on both Illumina and Sanger platforms, mitogenomes of four micrabaciids range from 19,048 to 19,542 bp and have gene content and order similar to the majority of scleractinians. Phylogenies containing all mitochondrial genes confrm the monophyly of Micrabaciidae as a sister group to the rest of Scleractinia. This topology not only corroborates the hypothesis of a solitary and azooxanthellate ancestor for the order, but also agrees with the unique skeletal microstructure previously found in the family. Moreover, the early-diverging position of micrabaciids followed by gardineriids reinforces the previously observed macromorphological similarities between micrabaciids and Corallimorpharia as -
Using DNA Barcoding Technique to Identify Some Scleractinian Coral Species Along the Egyptian Coast of the Red Sea and Southern of Arabian Gulf
Journal of Environmental Science and Public Health doi: 10.26502/jesph.96120028 Volume 2, Issue 1 Research Article Using DNA Barcoding Technique to Identify Some Scleractinian Coral Species along the Egyptian Coast of the Red Sea and Southern of Arabian Gulf Mohammed Ahmed Sadek1*, Mohammed Ismail Ahmed2, Fedekar Fadel Madkour1 and Mahmoud Hasan Hanafy2 1Department of Marine Science, Faculty of Science, Port Said University, Port Said, Egypt 2Department Marine Science, Faculty of Science, Suez Canal University, Ismailia, Egypt *Corresponding Author: Mohammed Ahmed Sadek, Department of Marine Science, Faculty of Science, Port Said University, Port Said, Egypt, Tel: 00971501092572; E-mail: [email protected] Received: 05 February 2018; Accepted: 22 February 2018; Published: 28 February 2018 Abstract Scleractinian corals Phylogenetic studies have been shown that most taxa are not matched with their evolutionary histories. Using gross morphology as principal base, traditional taxonomy cannot solve the lack of well-defined and homologous characters that can describe scleractinian diversity sufficient. Scleractinian Coral species are hard to identify because of their morphological plasticity. DNA barcoding techniques were used to build molecular phylogenetic analysis to some common scleractinian species in Red Sea and Arabian Gulf. The phylogenetic analysis showed that Porites harrisoni, was clustered separate from other Porites sp collected from gene bank. While for Acropora digitefra genetic divergences were recorded between samples collected from the Red Sea and Gulf of Aqaba. Platygyra daeleda sample from Fanous (Red Sea) were distinct from other Platygyra daeleda samples same case were recorded with Pocillopora verrucosa samples. The DNA barcoding technique proves to be very useful in not only differentiating between species but also finding genetic diversity within species. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
The Touch of Nature Has Made the Whole World Kin: Interspecies Kin Selection in the Convention on International Trade in Endangered Species of Wild Fauna and Flora
SUNY College of Environmental Science and Forestry Digital Commons @ ESF Honors Theses 2015 The Touch of Nature Has Made the Whole World Kin: Interspecies Kin Selection in the Convention on International Trade in Endangered Species of Wild Fauna and Flora Laura E. Jenkins Follow this and additional works at: https://digitalcommons.esf.edu/honors Part of the Animal Law Commons, Animal Studies Commons, Behavior and Ethology Commons, Environmental Studies Commons, and the Human Ecology Commons Recommended Citation Jenkins, Laura E., "The Touch of Nature Has Made the Whole World Kin: Interspecies Kin Selection in the Convention on International Trade in Endangered Species of Wild Fauna and Flora" (2015). Honors Theses. 74. https://digitalcommons.esf.edu/honors/74 This Thesis is brought to you for free and open access by Digital Commons @ ESF. It has been accepted for inclusion in Honors Theses by an authorized administrator of Digital Commons @ ESF. For more information, please contact [email protected], [email protected]. 2015 The Touch of Nature Has Made the Whole World Kin INTERSPECIES KIN SELECTION IN THE CONVENTION ON INTERNATIONAL TRADE IN ENDANGERED SPECIES OF WILD FAUNA AND FLORA LAURA E. JENKINS Abstract The unequal distribution of legal protections on endangered species has been attributed to the “charisma” and “cuteness” of protected species. However, the theory of kin selection, which predicts the genetic relationship between organisms is proportional to the amount of cooperation between them, offers an evolutionary explanation for this phenomenon. In this thesis, it was hypothesized if the unequal distribution of legal protections on endangered species is a result of kin selection, then the genetic similarity between a species and Homo sapiens is proportional to the legal protections on that species. -
Conservation of Reef Corals in the South China Sea Based on Species and Evolutionary Diversity
Biodivers Conserv DOI 10.1007/s10531-016-1052-7 ORIGINAL PAPER Conservation of reef corals in the South China Sea based on species and evolutionary diversity 1 2 3 Danwei Huang • Bert W. Hoeksema • Yang Amri Affendi • 4 5,6 7,8 Put O. Ang • Chaolun A. Chen • Hui Huang • 9 10 David J. W. Lane • Wilfredo Y. Licuanan • 11 12 13 Ouk Vibol • Si Tuan Vo • Thamasak Yeemin • Loke Ming Chou1 Received: 7 August 2015 / Revised: 18 January 2016 / Accepted: 21 January 2016 Ó Springer Science+Business Media Dordrecht 2016 Abstract The South China Sea in the Central Indo-Pacific is a large semi-enclosed marine region that supports an extraordinary diversity of coral reef organisms (including stony corals), which varies spatially across the region. While one-third of the world’s reef corals are known to face heightened extinction risk from global climate and local impacts, prospects for the coral fauna in the South China Sea region amidst these threats remain poorly understood. In this study, we analyse coral species richness, rarity, and phylogenetic Communicated by Dirk Sven Schmeller. Electronic supplementary material The online version of this article (doi:10.1007/s10531-016-1052-7) contains supplementary material, which is available to authorized users. & Danwei Huang [email protected] 1 Department of Biological Sciences and Tropical Marine Science Institute, National University of Singapore, Singapore 117543, Singapore 2 Naturalis Biodiversity Center, PO Box 9517, 2300 RA Leiden, The Netherlands 3 Institute of Biological Sciences, Faculty of