International Journal of Molecular Sciences Article Differences between Well-Differentiated Neuroendocrine Tumors and Ductal Adenocarcinomas of the Pancreas Assessed by Multi-Omics Profiling 1, 2, 2,3 2,3 Teresa Starzy ´nska y, Jakub Karczmarski y, Agnieszka Paziewska , Maria Kulecka , Katarzyna Ku´snierz 4 , Natalia Zeber-Lubecka˙ 3, Filip Ambro˙zkiewicz 2 , Michał Mikula 2 , Beata Kos-Kudła 5 and Jerzy Ostrowski 2,3,* 1 Department of Gastroenterology, Pomeranian Medical University in Szczecin, 70-204 Szczecin, Poland;
[email protected] 2 Department of Genetics, Maria Sklodowska-Curie National Research Institute of Oncology, 02-781 Warsaw, Poland;
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[email protected] (M.M.) 3 Department of Gastroenterology, Hepatology and Clinical Oncology, Centre of Postgraduate Medical Education, 01-813 Warsaw, Poland;
[email protected] 4 Department of Gastrointestinal Surgery, Medical University of Silesia, 40-514 Katowice, Poland;
[email protected] 5 Department of Endocrinology and Neuroendocrine Tumors, ENETS Center of Excelence, Department of Pathophysiology and Endocrinology, Medical University of Silesia, 40-514 Katowice, Poland;
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[email protected]; Tel.: +48-225462575; Fax: +48-225462449 These authors contributed equally to this work. y Received: 18 May 2020; Accepted: 18 June 2020; Published: 23 June 2020 Abstract: Most pancreatic neuroendocrine tumors (PNETs) are indolent, while pancreatic ductal adenocarcinomas (PDACs) are particularly aggressive. To elucidate the basis for this difference and to establish the biomarkers, by using the deep sequencing, we analyzed somatic variants across coding regions of 409 cancer genes and measured mRNA/miRNA expression in nine PNETs, eight PDACs, and four intestinal neuroendocrine tumors (INETs).