Comparison of Circumsporozoite Proteins from Avian and Mammalian
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Exploration of Laboratory Techniques Relating to Cryptosporidium Parvum Propagation, Life Cycle Observation, and Host Immune Responses to Infection
EXPLORATION OF LABORATORY TECHNIQUES RELATING TO CRYPTOSPORIDIUM PARVUM PROPAGATION, LIFE CYCLE OBSERVATION, AND HOST IMMUNE RESPONSES TO INFECTION A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science By Cheryl Marie Brown In Partial Fulfillment for the Degree of MASTER OF SCIENCE Major Department: Veterinary and Microbiological Sciences February 2014 Fargo, North Dakota North Dakota State University Graduate School Title EXPLORATION OF LABORATORY TECHNIQUES RELATING TO CRYPTOSPORIDIUM PARVUM PROPAGATION, LIFE CYCLE OBSERVATION, AND HOST IMMUNE RESPONSES TO INFECTION By Cheryl Marie Brown The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Jane Schuh Chair Dr. John McEvoy Dr. Carrie Hammer Approved: 4-8-14 Dr. Charlene Wolf-Hall Date Department Chair ii ABSTRACT Cryptosporidium causes cryptosporidiosis, a self-limiting diarrheal disease in healthy people, but causes serious health issues for immunocompromised individuals. Cryptosporidiosis has been observed in humans since the early 1970s and continues to cause public health concerns. Cryptosporidium has a complicated life cycle making laboratory study challenging. This project explores several ways of studying Cryptosporidium parvum, with a goal of applying existing techniques to further understand this life cycle. Utilization of a neonatal mouse model demonstrated laser microdissection as a tool for studying host immune response to infeciton. A cell culture technique developed on FrameSlides™ enables laser microdissection of individual infected cells for further analysis. Finally, the hypothesis that the availability of cells to infect drives the switch from asexual to sexual parasite reproduction was tested by time-series infection. -
The Transcriptome of the Avian Malaria Parasite Plasmodium
bioRxiv preprint doi: https://doi.org/10.1101/072454; this version posted August 31, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 The Transcriptome of the Avian Malaria Parasite 2 Plasmodium ashfordi Displays Host-Specific Gene 3 Expression 4 5 6 7 8 Running title 9 The Transcriptome of Plasmodium ashfordi 10 11 Authors 12 Elin Videvall1, Charlie K. Cornwallis1, Dag Ahrén1,3, Vaidas Palinauskas2, Gediminas Valkiūnas2, 13 Olof Hellgren1 14 15 Affiliation 16 1Department of Biology, Lund University, Lund, Sweden 17 2Institute of Ecology, Nature Research Centre, Vilnius, Lithuania 18 3National Bioinformatics Infrastructure Sweden (NBIS), Lund University, Lund, Sweden 19 20 Corresponding authors 21 Elin Videvall ([email protected]) 22 Olof Hellgren ([email protected]) 23 24 1 bioRxiv preprint doi: https://doi.org/10.1101/072454; this version posted August 31, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 25 Abstract 26 27 Malaria parasites (Plasmodium spp.) include some of the world’s most widespread and virulent 28 pathogens, infecting a wide array of vertebrates. Our knowledge of the molecular mechanisms these 29 parasites use to invade and exploit hosts other than mice and primates is, however, extremely limited. 30 How do Plasmodium adapt to individual hosts and to the immune response of hosts throughout an 31 infection? To better understand parasite plasticity, and identify genes that are conserved across the 32 phylogeny, it is imperative that we characterize transcriptome-wide gene expression from non-model 33 malaria parasites in multiple host individuals. -
Characterizing the Genetic Diversity of the Monkey Malaria Parasite Plasmodium Cynomolgi
Infection, Genetics and Evolution 40 (2016) 243–252 Contents lists available at ScienceDirect Infection, Genetics and Evolution journal homepage: www.elsevier.com/locate/meegid Characterizing the genetic diversity of the monkey malaria parasite Plasmodium cynomolgi Patrick L. Sutton a,1, Zunping Luo a,PaulC.S.Divisb,c, Volney K. Friedrich d,2,DavidJ.Conwayb,c, Balbir Singh c, John W. Barnwell e,JaneM.Carltona, Steven A. Sullivan a,⁎ a Center for Genomics and Systems Biology, Department of Biology, New York University, 12 Waverly Place, New York, NY 10003, United States b Pathogen Molecular Biology Department, London School of Hygiene and Tropical Medicine, Keppel St, London WC1E 7HT, United Kingdom c Malaria Research Centre, Faculty of Medicine and Health Sciences, University Malaysia Sarawak, 94300 Kota Samarahan, Sarawak, Malaysia d Department of Anthropology, New York University, 38 Waverly Place, New York, NY 10003, United States e Laboratory Research and Development Unit, Malaria Branch, Centers for Disease Control and Prevention, Atlanta, GA, United States article info abstract Article history: Plasmodium cynomolgi is a malaria parasite that typically infects Asian macaque monkeys, and humans on rare Received 4 January 2016 occasions. P. cynomolgi serves as a model system for the human malaria parasite Plasmodium vivax, with which Received in revised form 1 March 2016 it shares such important biological characteristics as formation of a dormant liver stage and a preference to Accepted 2 March 2016 invade reticulocytes. While genomes of three P. cynomolgi strains have been sequenced, genetic diversity of Available online 14 March 2016 P. cynomolgi has not been widely investigated. To address this we developed the first panel of P. -
Stump-Tailed Macaques (Macaca Arctoides)
Fungfuang et al. Malar J (2020) 19:350 https://doi.org/10.1186/s12936-020-03424-0 Malaria Journal RESEARCH Open Access Malaria parasites in macaques in Thailand: stump-tailed macaques (Macaca arctoides) are new natural hosts for Plasmodium knowlesi, Plasmodium inui, Plasmodium coatneyi and Plasmodium feldi Wirasak Fungfuang1, Chanya Udom1, Daraka Tongthainan2, Khamisah Abdul Kadir3 and Balbir Singh3* Abstract Background: Certain species of macaques are natural hosts of Plasmodium knowlesi and Plasmodium cynomolgi, which can both cause malaria in humans, and Plasmodium inui, which can be experimentally transmitted to humans. A signifcant number of zoonotic malaria cases have been reported in humans throughout Southeast Asia, includ- ing Thailand. There have been only two studies undertaken in Thailand to identify malaria parasites in non-human primates in 6 provinces. The objective of this study was to determine the prevalence of P. knowlesi, P. cynomolgi, P. inui, Plasmodium coatneyi and Plasmodium feldi in non-human primates from 4 new locations in Thailand. Methods: A total of 93 blood samples from Macaca fascicularis, Macaca leonina and Macaca arctoides were collected from four locations in Thailand: 32 were captive M. fascicularis from Chachoengsao Province (CHA), 4 were wild M. fascicularis from Ranong Province (RAN), 32 were wild M. arctoides from Prachuap Kiri Khan Province (PRA), and 25 were wild M. leonina from Nakornratchasima Province (NAK). DNA was extracted from these samples and analysed by nested PCR assays to detect Plasmodium, and subsequently to detect P. knowlesi, P. coatneyi, P. cynomolgi, P. inui and P. feldi. Results: Twenty-seven of the 93 (29%) samples were Plasmodium-positive by nested PCR assays. -
Plasmodium Vivax-Like Genome Sequences Shed New Insights Into Plasmodium Vivax Biology and Evolution
bioRxiv preprint doi: https://doi.org/10.1101/205302; this version posted March 12, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: Plasmodium vivax-like genome sequences shed new insights into Plasmodium vivax biology and evolution Authors: Aude Gilabert1,#, Thomas D. Otto2,3,#, Gavin G. Rutledge2, Blaise Franzon1, Benjamin Ollomo4, Céline Arnathau1, Patrick Durand1, Nancy D. Moukodoum4, Alain- Prince Okouga4, Barthélémy Ngoubangoye4, Boris Makanga4, Larson Boundenga4, Christophe Paupy1,4, François Renaud1, Franck Prugnolle1,4,*, Virginie Rougeron1,4,* Affiliations: 1MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, FRANCE 2Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SA, UK 3 Institute of Infection, Immunity and Inflammation, University of Glasgow, College of Medical, Veterinary and Life Sciences, Sir Graeme Davies Building, 120 University Place, Glasgow G12 8TA, UK 4Centre International de Recherches Médicales de Franceville, B.P. 769, Franceville, GABON #Contributed equally to this work *Corresponding authors: Rougeron Virginie; Laboratoire MIVEGEC (UM-CNRS-IRD), 34394 Montpellier, France; [email protected] / [email protected]; Prugnolle Franck; Laboratoire MIVEGEC (UM-CNRS-IRD), 34394 Montpellier, France; [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/205302; this version posted March 12, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Although Plasmodium vivax is responsible for the majority of malaria infections outside Africa, little is known about its evolution and pathway to humans. -
Evolutionary History of Human Plasmodium Vivax Revealed by Genome-Wide Analyses of Related Ape Parasites
Evolutionary history of human Plasmodium vivax revealed by genome-wide analyses of related ape parasites Dorothy E. Loya,b,1, Lindsey J. Plenderleithc,d,1, Sesh A. Sundararamana,b, Weimin Liua, Jakub Gruszczyke, Yi-Jun Chend,f, Stephanie Trimbolia, Gerald H. Learna, Oscar A. MacLeanc,d, Alex L. K. Morganc,d, Yingying Lia, Alexa N. Avittoa, Jasmin Gilesa, Sébastien Calvignac-Spencerg, Andreas Sachseg, Fabian H. Leendertzg, Sheri Speedeh, Ahidjo Ayoubai, Martine Peetersi, Julian C. Raynerj, Wai-Hong Thame,f, Paul M. Sharpc,d,2, and Beatrice H. Hahna,b,2,3 aDepartment of Medicine, University of Pennsylvania, Philadelphia, PA 19104; bDepartment of Microbiology, University of Pennsylvania, Philadelphia, PA 19104; cInstitute of Evolutionary Biology, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom; dCentre for Immunity, Infection and Evolution, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom; eWalter and Eliza Hall Institute of Medical Research, Parkville VIC 3052, Australia; fDepartment of Medical Biology, The University of Melbourne, Parkville VIC 3010, Australia; gRobert Koch Institute, 13353 Berlin, Germany; hSanaga-Yong Chimpanzee Rescue Center, International Development Association-Africa, Portland, OR 97208; iRecherche Translationnelle Appliquée au VIH et aux Maladies Infectieuses, Institut de Recherche pour le Développement, University of Montpellier, INSERM, 34090 Montpellier, France; and jMalaria Programme, Wellcome Trust Sanger Institute, Genome Campus, Hinxton Cambridgeshire CB10 1SA, United Kingdom Contributed by Beatrice H. Hahn, July 13, 2018 (sent for review June 12, 2018; reviewed by David Serre and L. David Sibley) Wild-living African apes are endemically infected with parasites most recently in bonobos (Pan paniscus)(7–11). Phylogenetic that are closely related to human Plasmodium vivax,aleadingcause analyses of available sequences revealed that ape and human of malaria outside Africa. -
Debugging Parasite Genomes: Using Metabolic Modeling to Accelerate Antiparasitic Drug Development
Debugging parasite genomes: Using metabolic modeling to accelerate antiparasitic drug development Maureen A. Carey Charlottesville, Virginia Bachelors of Science, Lafayette College 2014 A Dissertation presented to the Graduate Faculty of the University of Virginia in Candidacy for the Degree of Doctor of Philosophy Department of Microbiology, Immunology, and Cancer Biology University of Virginia September, 2018 i M. A. Carey ii Abstract: Eukaryotic parasites, like the casual agent of malaria, kill over one million people around the world annually. Developing novel antiparasitic drugs is a pressing need because there are few available therapeutics and the parasites have developed drug resistance. However, novel drug targets are challenging to identify due to poor genome annotation and experimental challenges associated with growing these parasites. Here, we focus on computational and experimental approaches that generate high-confidence hypotheses to accelerate labor-intensive experimental work and leverage existing experimental data to generate new drug targets. We generate genome-scale metabolic models for over 100 species to develop a parasite knowledgebase and apply these models to contextualize experimental data and to generate candidate drug targets. M. A. Carey iii Figure 0.1: Image from blog.wellcome.ac.uk/2010/06/15/of-parasitology-and-comics/. Preamble: Eukaryotic single-celled parasites cause diseases, such as malaria, African sleeping sickness, diarrheal disease, and leishmaniasis, with diverse clinical presenta- tions and large global impacts. These infections result in over one million preventable deaths annually and contribute to a significant reduction in disability-adjusted life years. This global health burden makes parasitic diseases a top priority of many economic development and health advocacy groups. -
The Historical Ecology of Human and Wild Primate Malarias in the New World
Diversity 2010, 2, 256-280; doi:10.3390/d2020256 OPEN ACCESS diversity ISSN 1424-2818 www.mdpi.com/journal/diversity Article The Historical Ecology of Human and Wild Primate Malarias in the New World Loretta A. Cormier Department of History and Anthropology, University of Alabama at Birmingham, 1401 University Boulevard, Birmingham, AL 35294-115, USA; E-Mail: [email protected]; Tel.: +1-205-975-6526; Fax: +1-205-975-8360 Received: 15 December 2009 / Accepted: 22 February 2010 / Published: 24 February 2010 Abstract: The origin and subsequent proliferation of malarias capable of infecting humans in South America remain unclear, particularly with respect to the role of Neotropical monkeys in the infectious chain. The evidence to date will be reviewed for Pre-Columbian human malaria, introduction with colonization, zoonotic transfer from cebid monkeys, and anthroponotic transfer to monkeys. Cultural behaviors (primate hunting and pet-keeping) and ecological changes favorable to proliferation of mosquito vectors are also addressed. Keywords: Amazonia; malaria; Neotropical monkeys; historical ecology; ethnoprimatology 1. Introduction The importance of human cultural behaviors in the disease ecology of malaria has been clear at least since Livingstone‘s 1958 [1] groundbreaking study describing the interrelationships among iron tools, swidden horticulture, vector proliferation, and sickle cell trait in tropical Africa. In brief, he argued that the development of iron tools led to the widespread adoption of swidden (―slash and burn‖) agriculture. These cleared agricultural fields carved out a new breeding area for mosquito vectors in stagnant pools of water exposed to direct sunlight. The proliferation of mosquito vectors and the subsequent heavier malarial burden in human populations led to the genetic adaptation of increased frequency of sickle cell trait, which confers some resistance to malaria. -
(Haemosporida: Haemoproteidae), with Report of in Vitro Ookinetes of Haemoproteus Hirundi
Chagas et al. Parasites Vectors (2019) 12:422 https://doi.org/10.1186/s13071-019-3679-1 Parasites & Vectors RESEARCH Open Access Sporogony of four Haemoproteus species (Haemosporida: Haemoproteidae), with report of in vitro ookinetes of Haemoproteus hirundinis: phylogenetic inference indicates patterns of haemosporidian parasite ookinete development Carolina Romeiro Fernandes Chagas* , Dovilė Bukauskaitė, Mikas Ilgūnas, Rasa Bernotienė, Tatjana Iezhova and Gediminas Valkiūnas Abstract Background: Haemoproteus (Parahaemoproteus) species (Haemoproteidae) are widespread blood parasites that can cause disease in birds, but information about their vector species, sporogonic development and transmission remain fragmentary. This study aimed to investigate the complete sporogonic development of four Haemoproteus species in Culicoides nubeculosus and to test if phylogenies based on the cytochrome b gene (cytb) refect patterns of ookinete development in haemosporidian parasites. Additionally, one cytb lineage of Haemoproteus was identifed to the spe- cies level and the in vitro gametogenesis and ookinete development of Haemoproteus hirundinis was characterised. Methods: Laboratory-reared C. nubeculosus were exposed by allowing them to take blood meals on naturally infected birds harbouring single infections of Haemoproteus belopolskyi (cytb lineage hHIICT1), Haemoproteus hirun- dinis (hDELURB2), Haemoproteus nucleocondensus (hGRW01) and Haemoproteus lanii (hRB1). Infected insects were dissected at intervals in order to detect sporogonic stages. In vitro exfagellation, gametogenesis and ookinete development of H. hirundinis were also investigated. Microscopic examination and PCR-based methods were used to confrm species identity. Bayesian phylogenetic inference was applied to study the relationships among Haemopro- teus lineages. Results: All studied parasites completed sporogony in C. nubeculosus. Ookinetes and sporozoites were found and described. Development of H. hirundinis ookinetes was similar both in vivo and in vitro. -
Plasmodium Asexual Growth and Sexual Development in the Haematopoietic Niche of the Host
REVIEWS Plasmodium asexual growth and sexual development in the haematopoietic niche of the host Kannan Venugopal 1, Franziska Hentzschel1, Gediminas Valkiūnas2 and Matthias Marti 1* Abstract | Plasmodium spp. parasites are the causative agents of malaria in humans and animals, and they are exceptionally diverse in their morphology and life cycles. They grow and develop in a wide range of host environments, both within blood- feeding mosquitoes, their definitive hosts, and in vertebrates, which are intermediate hosts. This diversity is testament to their exceptional adaptability and poses a major challenge for developing effective strategies to reduce the disease burden and transmission. Following one asexual amplification cycle in the liver, parasites reach high burdens by rounds of asexual replication within red blood cells. A few of these blood- stage parasites make a developmental switch into the sexual stage (or gametocyte), which is essential for transmission. The bone marrow, in particular the haematopoietic niche (in rodents, also the spleen), is a major site of parasite growth and sexual development. This Review focuses on our current understanding of blood-stage parasite development and vascular and tissue sequestration, which is responsible for disease symptoms and complications, and when involving the bone marrow, provides a niche for asexual replication and gametocyte development. Understanding these processes provides an opportunity for novel therapies and interventions. Gametogenesis Malaria is one of the major life- threatening infectious Malaria parasites have a complex life cycle marked Maturation of male and female diseases in humans and is particularly prevalent in trop- by successive rounds of asexual replication across gametes. ical and subtropical low- income regions of the world. -
Malaria During the Last Decade1
MALARIA DURING THE LAST DECADE1 MARTIN D. YOUNG National Institutes of Health, National Microbiological Institute, Laboratory of Tropical Diseases, Columbia, South Carolina The starting point of this paper is rather arbitrarily set at January, 1942, but the selection of this date also has some significance in the knowledge of malaria. Much of the world had just become involved in a great war and was being con fronted with problems in disease control relative to the military. Of these diseases by far the most important was malaria. The following is concerned mainly with human malaria and is not intended to be a comprehensive review of the field but rather of those developments which appear to me to be significant. Of the tremendous amount of work that has gone on in the malaria of lower animals, reference will be made only to such as is particularly relevant to human malaria or that which can serve for comparison to point up the particular dis cussion at hand. BIOLOGY During this period little attention was paid to the cytology of the parasite- However, MacDougall (1947), studying Plasmodium vivax and P. falciparum and working specifically with gamete formation definitely established that chro mosomes were present in plasmodial parasites. Such had been indicated before but this was the first definitive proof. Additional work by Wolcott (unpublished) indicates that the asexual stages of P. vivax have two chromosomes. There have been no new species of human malaria parasites accepted during this period. Surveys and studies of infected military personnel have delineated more clearly the distribution of the recognized four species of malaria on a world wide basis and have shown that many strains, particularly of P. -
Co-Infections with Babesia Microti and Plasmodium Parasites Along The
Zhou et al. Infectious Diseases of poverty 2013, 2:24 http://www.idpjournal.com/content/2/1/24 RESEARCH ARTICLE Open Access Co-infections with Babesia microti and Plasmodium parasites along the China-Myanmar border Xia Zhou1,2, Sheng-Guo Li3, Shen-Bo Chen1, Jia-Zhi Wang3, Bin Xu1, He-Jun Zhou1, Hong-Xiang Zhu Ge2, Jun-Hu Chen1 and Wei Hu1,4* Abstract Background: Babesiosis is an emerging health risk in several parts of the world. However, little is known about the prevalence of Babesia in malaria-endemic countries. The area along the China-Myanmar border in Yunnan is a main endemic area of malaria in P.R. China, however, human infection with Babesia microti (B. microti) is not recognized in this region, and its profile of co-infection is not yet clear. Methods: To understand its profile of co-infections with B. microti, our investigation was undertaken in the malaria-endemic area along the China-Myanmar border in Yunnan between April 2012 and June 2013. Four parasite species, including B. microti, Plasmodium falciparum (P. falciparum), P. vivax, and P. malariae, were identified among 449 suspected febrile persons detected by nested polymerase chain reaction (PCR) assay based on small subunit ribosomal ribonucleic acid (RNA) genes of B. microti and Plasmodium spp. Results: Of all the collected samples from febrile patients, mono-infection with B. microti, P. vivax, P. falciparum, and P. malariae accounted for 1.8% (8/449), 9.8% (44/449), 2.9% (13/449), and 0.2% (1/449), respectively. The rate of mixed infections of B.