Cyprinid Herpesvirus 3: an Interesting Virus for Applied and Fundamental Research
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Trunkloads of Viruses
COMMENTARY Trunkloads of Viruses Philip E. Pellett Department of Immunology and Microbiology, Wayne State University School of Medicine, Detroit, Michigan, USA Elephant populations are under intense pressure internationally from habitat destruction and poaching for ivory and meat. They also face pressure from infectious agents, including elephant endotheliotropic herpesvirus 1 (EEHV1), which kills ϳ20% of Asian elephants (Elephas maximus) born in zoos and causes disease in the wild. EEHV1 is one of at least six distinct EEHV in a phylogenetic lineage that appears to represent an ancient but newly recognized subfamily (the Deltaherpesvirinae) in the family Herpesviridae. lephant endotheliotropic herpesvirus 1 (EEHV1) causes a rap- the Herpesviridae (the current complete list of approved virus tax- Downloaded from Eidly progressing and usually fatal hemorrhagic disease that ons is available at http://ictvonline.org/). In addition, approxi- occurs in the wild in Asia and affects ϳ20% of Asian elephant mately 200 additional viruses detected using methods such as (Elephas maximus) calves born in zoos in the United States and those described above await formal consideration (V. Lacoste, Europe (1). About 60% of juvenile deaths of captive elephants are personal communication). With very few exceptions, the amino attributed to such infections. Development of control measures acid sequence of a small conserved segment of the viral DNA poly- has been hampered by the lack of systems for culture of the virus in merase (ϳ150 amino acids) is sufficient to not only reliably iden- laboratories. Its genetic study has been restricted to analysis of tify a virus as belonging to the evolutionary lineage represented by blood, trunk wash fluid, and tissue samples collected during nec- the Herpesviridae, but also their subfamily, and in most cases a http://jvi.asm.org/ ropsies. -
Cyprinus Carpio
Académie Universitaire Wallonie - Europe Université de Liège Faculté de Médecine Vétérinaire Département des Maladies Infectieuses et Parasitaires Service d’Immunologie et de Vaccinologie Etude des portes d’entrée de l’Herpèsvirus cyprin 3 chez Cyprinus carpio Study of the portals of entry of Cyprinid herpesvirus 3 in Cyprinus carpio Guillaume FOURNIER Thèse présentée en vue de l’obtention du grade de Docteur en Sciences Vétérinaires Année académique 2011-2012 Académie Universitaire Wallonie - Europe Université de Liège Faculté de Médecine Vétérinaire Département des Maladies Infectieuses et Parasitaires Service d’Immunologie et de Vaccinologie Etude des portes d’entrée de l’Herpèsvirus cyprin 3 chez Cyprinus carpio Study of the portals of entry of Cyprinid herpesvirus 3 in Cyprinus carpio Promoteur : Prof. Alain Vanderplasschen Guillaume FOURNIER Thèse présentée en vue de l’obtention du grade de Docteur en Sciences Vétérinaires Année académique 2011-2012 « La science progresse en indiquant l'immensité de l'ignoré. » Louis Pauwels Remerciements Liège, le 15 février 2012 L’accomplissement d’une thèse est un long et palpitant voyage en océan où se mélangent la curiosité, le doute, la persévérance, et la confiance… en soi bien sûr, mais surtout envers toutes les personnes qui, par leurs conseils, leur aide, leur soutien m’ont permis de mener cette thèse à bien. Je tiens ici à remercier mes collègues, amis et famille qui ont été tantôt les phares, tantôt les boussoles, toujours les fidèles compagnons de cette aventure. Je commencerais par adresser mes plus sincères remerciements à mon promoteur, le Professeur Alain Vanderplasschen, qui m’avait déjà remarqué en amphithéâtre pour ma curiosité, à moins que ce ne soit pour mon irrésistible coiffure.. -
Cyprinid Herpesvirus 3 Genesig Advanced
Primerdesign TM Ltd Cyprinid herpesvirus 3 Pol gene for DNA polymerase genesig® Advanced Kit 150 tests For general laboratory and research use only Quantification of Cyprinid herpesvirus 3 genomes. 1 genesig Advanced kit handbook HB10.03.11 Published Date: 09/11/2018 Introduction to Cyprinid herpesvirus 3 Cyprinid herpesvirus 3 (CyHV3) is the causative agent of a lethal disease in common (Cyprinus carpio carpio) and Koi carp (Cyprnius carpio koi). It was discovered in the late 1990s and has rapidly spread worldwide among cultured common carp and ornamental koi. Previously known as koi herpesvirus, it has caused severe economic losses in the global carp industry with its spread being attributed to international trade. The virus is a member of the order Herepesvirales and family Alloherpesviridae. It has a linear, double stranded genome of approximately 295 kb in length consisting of a large central portion flanked by two 22 kb repeat regions. The genome encodes 156 open reading frames (ORFs) including 8 ORFs encoded by the repeat regions. The genome is packaged in an icosahedral capsid that is contained within viral glycoproteins and then a host derived lipid envelope, giving an overall virion of 170-200nm in diameter. At present, common and koi carp are the only species known to be affected by the virus. The viral particles are transmitted through faeces, sloughing of mucous and inflammatory cells, and secretions that are released into the water. The skin pores are the main source of entry and site of replication but the disease also spreads to the organs, particularly the kidneys. The viral particles are further spread when the carp come into contact with each other during grazing, spawning or when uninfected fish pick at the skin lesions of dead infected fish. -
Emerging Viral Diseases of Fish and Shrimp Peter J
Emerging viral diseases of fish and shrimp Peter J. Walker, James R. Winton To cite this version: Peter J. Walker, James R. Winton. Emerging viral diseases of fish and shrimp. Veterinary Research, BioMed Central, 2010, 41 (6), 10.1051/vetres/2010022. hal-00903183 HAL Id: hal-00903183 https://hal.archives-ouvertes.fr/hal-00903183 Submitted on 1 Jan 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Vet. Res. (2010) 41:51 www.vetres.org DOI: 10.1051/vetres/2010022 Ó INRA, EDP Sciences, 2010 Review article Emerging viral diseases of fish and shrimp 1 2 Peter J. WALKER *, James R. WINTON 1 CSIRO Livestock Industries, Australian Animal Health Laboratory (AAHL), 5 Portarlington Road, Geelong, Victoria, Australia 2 USGS Western Fisheries Research Center, 6505 NE 65th Street, Seattle, Washington, USA (Received 7 December 2009; accepted 19 April 2010) Abstract – The rise of aquaculture has been one of the most profound changes in global food production of the past 100 years. Driven by population growth, rising demand for seafood and a levelling of production from capture fisheries, the practice of farming aquatic animals has expanded rapidly to become a major global industry. -
HSV-1 Reprogramming of the Host Transcriptional Environment By
Title Page HSV-1 reprogramming of the host transcriptional environment by Sarah E. Dremel B.S., University of Minnesota Twin Cities, 2015 Submitted to the Graduate Faculty of the School of Medicine in partial fulfillment of the requirements for the degree of Doctor of Philosophy University of Pittsburgh 2020 Committee Page UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE This dissertation was presented by Sarah E. Dremel It was defended on March 20, 2020 and approved by Jennifer Bomberger, Associate Professor, Department of Microbiology and Molecular Genetics Fred Homa, Professor, Department of Microbiology and Molecular Genetics Nara Lee, Assistant Professor, Department of Microbiology and Molecular Genetics Martin Schmidt, Professor, Department of Microbiology and Molecular Genetics Dissertation Director: Neal DeLuca, Professor, Department of Microbiology and Molecular Genetics ii Copyright © by Sarah E. Dremel 2020 iii Abstract HSV-1 reprogramming of the host transcriptional environment Sarah E. Dremel, PhD University of Pittsburgh, 2020 Herpes Simplex Virus-1 (HSV-1) is a ubiquitous pathogen of the oral and genital mucosa. The 152 kilobase double stranded DNA virus employs a coordinated cascade of transcriptional events to efficiently generate progeny. Using Next Generation Sequencing (NGS) techniques we were able to determine a global, unbiased view of both the host and pathogen. We propose a model for how viral DNA replication results in the differential utilization of cellular factors that function in transcription initiation. Our work outlines the various cis- and trans- acting factors utilized by the virus for this complex transcriptional program. We further elucidated the critical role that the major viral transactivator, ICP4, plays throughout the life cycle. -
Aquatic Animal Viruses Mediated Immune Evasion in Their Host T ∗ Fei Ke, Qi-Ya Zhang
Fish and Shellfish Immunology 86 (2019) 1096–1105 Contents lists available at ScienceDirect Fish and Shellfish Immunology journal homepage: www.elsevier.com/locate/fsi Aquatic animal viruses mediated immune evasion in their host T ∗ Fei Ke, Qi-Ya Zhang State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China ARTICLE INFO ABSTRACT Keywords: Viruses are important and lethal pathogens that hamper aquatic animals. The result of the battle between host Aquatic animal virus and virus would determine the occurrence of diseases. The host will fight against virus infection with various Immune evasion responses such as innate immunity, adaptive immunity, apoptosis, and so on. On the other hand, the virus also Virus-host interactions develops numerous strategies such as immune evasion to antagonize host antiviral responses. Here, We review Virus targeted molecular and pathway the research advances on virus mediated immune evasions to host responses containing interferon response, NF- Host responses κB signaling, apoptosis, and adaptive response, which are executed by viral genes, proteins, and miRNAs from different aquatic animal viruses including Alloherpesviridae, Iridoviridae, Nimaviridae, Birnaviridae, Reoviridae, and Rhabdoviridae. Thus, it will facilitate the understanding of aquatic animal virus mediated immune evasion and potentially benefit the development of novel antiviral applications. 1. Introduction Various antiviral responses have been revealed [19–22]. How they are overcome by different viruses? Here, we select twenty three strains Aquatic viruses have been an essential part of the biosphere, and of aquatic animal viruses which represent great harms to aquatic ani- also a part of human and aquatic animal lives. -
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Monaghan et al. Vet Res (2016) 47:8 DOI 10.1186/s13567-015-0297-6 Veterinary Research RESEARCH ARTICLE Open Access Expression of immunogenic structural proteins of cyprinid herpesvirus 3 in vitro assessed using immunofluorescence Sean J. Monaghan1* , Kim D. Thompson1,2, James E. Bron1, Sven M. Bergmann3, Tae S. Jung4, Takashi Aoki5, K. Fiona Muir1, Malte Dauber3, Sven Reiche3, Diana Chee1,6, Shin M. Chong6, Jing Chen7 and Alexandra Adams1 Abstract Cyprinid herpesvirus 3 (CyHV-3), also called koi herpesvirus (KHV), is the aetiological agent of a fatal disease in carp and koi (Cyprinus carpio L.), referred to as koi herpesvirus disease. The virus contains at least 40 structural proteins, of which few have been characterised with respect to their immunogenicity. Indirect immunofluorescence assays (IFAs) using two epitope-specific monoclonal antibodies (MAbs) were used to examine the expression kinetics of two potentially immunogenic and diagnostically relevant viral antigens, an envelope glycoprotein and a capsid-associated protein. The rate of expression of these antigens was determined following a time-course of infection in two CyHV-3 susceptible cell lines. The results were quantified using an IFA, performed in microtitre plates, and image analysis was used to analyse confocal micrographs, enabling measurement of differential virus-associated fluorescence and nucleus-associated fluorescence from stacks of captured scans. An 8-tenfold increase in capsid-associated protein expression was observed during the first 5 days post-infection compared to a 2-fold increase in glycoprotein expres- sion. A dominant protein of ~100 kDa reacted with the capsid-associated MAb≤ (20F10) in western blot analysis. -
Evaluation of Cyprinid Herpesvirus 2 Latency and Reactivation in Carassius Gibel
microorganisms Article Evaluation of Cyprinid Herpesvirus 2 Latency and Reactivation in Carassius gibel 1, 1, 1 1 2 1,3 Wenjun Chai y, Lin Qi y, Yujun Zhang , Mingming Hong , Ling Jin , Lijuan Li and Junfa Yuan 1,3,* 1 Department of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan 430070, China; [email protected] (W.C.); [email protected] (L.Q.); [email protected] (Y.Z.); [email protected] (M.H.); [email protected] (L.L.) 2 Department of Biomedical Science, Carlson College of Veterinary Medicine, Oregon State University, Corvallis, OR 97330, USA; [email protected] 3 Hubei Engineering Research Center for Aquatic Animal Diseases Control and Prevention, Wuhan 430070, China * Correspondence: [email protected] These authors contribute equal. y Received: 20 January 2020; Accepted: 19 March 2020; Published: 21 March 2020 Abstract: Cyprinid herpesvirus 2 (CyHV-2, species Cyprinid herpesvirus 2) causes severe mortality in ornamental goldfish, crucian carp (Carassius auratus), and gibel carp (Carassius gibelio). It has been shown that the genomic DNA of CyHV-2 could be detected in subclinical fish, which implied that CyHV-2 could establish persistent infection. In this study, the latency of CyHV-2 was investigated in the survival fish after primary infection. CyHV-2 genomic DNA was detected in multiple tissues of acute infection samples; however, detection of CyHV-2 DNA was significantly reduced in fish recovered from the primary infection on day 300 postinfection. No active viral gene transcription, such as DNA polymerase and ORF99, was detected in recovered fish. -
"Fischgesundheit Und Fischerei Im Wandel Der Zeit"
Fischgesundheit und Fischerei im Wandel der Zeit Tagungsband XV. Gemeinschaftstagung der Deutschen, Österreichischen und Schweizer Sektionen der European Association of Fish Pathologists (EAFP) Starnberg, 8. – 10. Oktober 2014 Die Tagung wurde in wesentlichen Teilen finanziert vom Bayerischen Staatsministerium für Ernährung, Landwirtschaft und Forsten (StMELF) aus der Fischereiabgabe Bayerns Weitere Unterstützung erfolgte durch: ― Niedersächsisches Landesamt für Verbraucherschutz und Lebensmittelsicherheit ― Bayerische Landesanstalt für Landwirtschaft, Institut für Fischerei ― MSD Tiergesundheit, Intervet Deutschland GmbH ― Zentralverband Zoologischer Fachbetriebe (ZZF) und Wirtschaftsgemeinschaft Zoolo- gischer Fachbetriebe GmbH (WZF) ― Familie Gerda und Hartmut Stachowitz ― Oswald Fürneisen ― Tetra GmbH, Melle ― BioMar Group Für die Erstellung des Tagungsbandes wurden die von den Autoren eingesandten Manu- skripte bzw. Zusammenfassungen verwendet. Für die Inhalte und Abbildungen sind die Autoren verantwortlich. Einige Beiträge wurden oder werden an anderer Stelle veröffent- licht. Im vorliegenden Tagungsband sind Zusammenfassungen dieser Beiträge veröffent- licht. Zitiervorschlag KLEINGELD, D. W., und WEDEKIND, H. (Hrsg.) (2015): Fischgesundheit und Fische- rei im Wandel der Zeit. XV. Gemeinschaftstagung der Deutschen, Österreichischen und Schweizer Sektion der European Association of Fish Pathologists (EAFP), 8. – 10. Okto- ber 2014 an der LfL in Starnberg. Impressum Herausgeber: Bayerische Landesanstalt für Landwirtschaft, Vöttinger -
Fish Herpesvirus Diseases
ACTA VET. BRNO 2012, 81: 383–389; doi:10.2754/avb201281040383 Fish herpesvirus diseases: a short review of current knowledge Agnieszka Lepa, Andrzej Krzysztof Siwicki Inland Fisheries Institute, Department of Fish Pathology and Immunology, Olsztyn, Poland Received March 19, 2012 Accepted July 16, 2012 Abstract Fish herpesviruses can cause significant economic losses in aquaculture, and some of these viruses are oncogenic. The virion morphology and genome organization of fish herpesviruses are generally similar to those of higher vertebrates, but the phylogenetic connections between herpesvirus families are tenuous. In accordance with new taxonomy, fish herpesviruses belong to the family Alloherpesviridae in the order Herpesvirales. Fish herpesviruses can induce diseases ranging from mild, inapparent infections to serious ones that cause mass mortality. The aim of this work was to summarize the present knowledge about fish herpesvirus diseases. Alloherpesviridae, CyHV-3, CyHV-2, CyHV-1, IcHV-1, AngHV-1 Herpesviruses comprise a numerous group of large DNA viruses with common virion structure and biological properties (McGeoch et al. 2008; Mattenleiter et al. 2008). They are host-specific pathogens. Apart from three herpesviruses found recently in invertebrate species, all known herpesviruses infect vertebrates, from fish to mammals (Davison et al. 2005a; Savin et al. 2010). According to a new classification accepted by the International Committee on Taxonomy of Viruses (http:/ictvonline.org), all herpesviruses have been incorporated into a new order named Herpesvirales, which has been split into three families. The revised family Herpesviridae contains mammalian, avian, and reptilian viruses; the newly-created family Alloherpesviridae contains herpesviruses of fish and amphibians, and the new family Malacoherpesviridae comprises single invertebrate herpesvirus (Ostreid herpesvirus). -
Koi Herpesvirus Disease (KHVD)1 Kathleen H
VM-149 Koi Herpesvirus Disease (KHVD)1 Kathleen H. Hartman, Roy P.E. Yanong, Deborah B. Pouder, B. Denise Petty, Ruth Francis-Floyd, Allen C. Riggs, and Thomas B. Waltzek2 Introduction Koi herpesvirus (KHV) is a highly contagious virus that causes significant morbidity and mortality in common carp (Cyprinus carpio) varieties (Hedrick et al. 2000, Haenen et al. 2004). Common carp is raised as a foodfish in many countries and has also been selectively bred for the ornamental fish industry where it is known as koi. The first recognized case of KHV occurred in the United Kingdom in 1996 (Haenen et al. 2004). Since then other cases have been confirmed in almost all countries that culture koi and/ or common carp with the exception of Australia (Hedrick et al. 2000; Haenen et al. 2004, Pokorova et al. 2005). This information sheet is intended to inform veterinarians, biologists, fish producers and hobbyists about KHV disease. What Is KHV? Figure 1. Koi with mottled gills and sunken eyes due to koi Koi herpesvirus (also known as Cyprinid herpesvirus 3; herpesvirus disease. Credit: Deborah B. Pouder, University of Florida CyHV3) is classified as a double-stranded DNA virus herpesvirus, based on virus morphology and genetics, and belonging to the family Alloherpesviridae (which includes is closely related to carp pox virus (Cyprinid herpesvirus fish herpesviruses). The work of Waltzek and colleagues 1; CyHV1) and goldfish hematopoietic necrosis virus (Waltzek et al. 2005, 2009) revealed that KHV is indeed a (Cyprinid herpesvirus 2; CyHV2). Koi herpesvirus disease has been diagnosed in koi and common carp (Hedrick 1. -
Whole-Proteome Phylogeny of Large Dsdna Virus Families by an Alignment-Free Method
Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method Guohong Albert Wua,b, Se-Ran Juna, Gregory E. Simsa,b, and Sung-Hou Kima,b,1 aDepartment of Chemistry, University of California, Berkeley, CA 94720; and bPhysical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720 Contributed by Sung-Hou Kim, May 15, 2009 (sent for review February 22, 2009) The vast sequence divergence among different virus groups has self-organizing maps (18) have also been used to understand the presented a great challenge to alignment-based sequence com- grouping of viruses. parison among different virus families. Using an alignment-free In the previous alignment-free phylogenomic studies using l-mer comparison method, we construct the whole-proteome phylogeny profiles, 3 important issues were not properly addressed: (i) the for a population of viruses from 11 viral families comprising 142 selection of the feature length, l, appears to be without logical basis; large dsDNA eukaryote viruses. The method is based on the feature (ii) no statistical assessment of the tree branching support was frequency profiles (FFP), where the length of the feature (l-mer) is provided; and (iii) the effect of HGT on phylogenomic relationship selected to be optimal for phylogenomic inference. We observe was not considered. HGT in LDVs has been documented by that (i) the FFP phylogeny segregates the population into clades, alignment-based methods (19–22), but these studies have mostly the membership of each has remarkable agreement with current searched for HGT from host to a single family of viruses, and there classification by the International Committee on the Taxonomy of has not been a study of interviral family HGT among LDVs.