Stable Isotope Analyses of Benthic Organisms in Lake Baikal
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Freshwater Aquatic Biomes GREENWOOD GUIDES to BIOMES of the WORLD
Freshwater Aquatic Biomes GREENWOOD GUIDES TO BIOMES OF THE WORLD Introduction to Biomes Susan L. Woodward Tropical Forest Biomes Barbara A. Holzman Temperate Forest Biomes Bernd H. Kuennecke Grassland Biomes Susan L. Woodward Desert Biomes Joyce A. Quinn Arctic and Alpine Biomes Joyce A. Quinn Freshwater Aquatic Biomes Richard A. Roth Marine Biomes Susan L. Woodward Freshwater Aquatic BIOMES Richard A. Roth Greenwood Guides to Biomes of the World Susan L. Woodward, General Editor GREENWOOD PRESS Westport, Connecticut • London Library of Congress Cataloging-in-Publication Data Roth, Richard A., 1950– Freshwater aquatic biomes / Richard A. Roth. p. cm.—(Greenwood guides to biomes of the world) Includes bibliographical references and index. ISBN 978-0-313-33840-3 (set : alk. paper)—ISBN 978-0-313-34000-0 (vol. : alk. paper) 1. Freshwater ecology. I. Title. QH541.5.F7R68 2009 577.6—dc22 2008027511 British Library Cataloguing in Publication Data is available. Copyright C 2009 by Richard A. Roth All rights reserved. No portion of this book may be reproduced, by any process or technique, without the express written consent of the publisher. Library of Congress Catalog Card Number: 2008027511 ISBN: 978-0-313-34000-0 (vol.) 978-0-313-33840-3 (set) First published in 2009 Greenwood Press, 88 Post Road West, Westport, CT 06881 An imprint of Greenwood Publishing Group, Inc. www.greenwood.com Printed in the United States of America The paper used in this book complies with the Permanent Paper Standard issued by the National Information Standards Organization (Z39.48–1984). 10987654321 Contents Preface vii How to Use This Book ix The Use of Scientific Names xi Chapter 1. -
Environmental Biology of Fishes
Environmental Biology of Fishes Fatty acid composition in the white muscle of Cottoidei fishes of Lake Baikal reflects their habitat depth --Manuscript Draft-- Manuscript Number: EBFI-D-16-00347R2 Full Title: Fatty acid composition in the white muscle of Cottoidei fishes of Lake Baikal reflects their habitat depth Article Type: Original Paper Keywords: deep water fish; monounsaturated fatty acids; polyunsaturated fatty acids; temperature adaptation; taxonomy; trophic ecology; viscosity homeostasis; white muscle Corresponding Author: Reijo Käkelä Helsingin Yliopisto Helsinki, FINLAND Corresponding Author Secondary Information: Corresponding Author's Institution: Helsingin Yliopisto Corresponding Author's Secondary Institution: First Author: Larisa D. Radnaeva First Author Secondary Information: Order of Authors: Larisa D. Radnaeva Dmitry V. Popov Otto Grahl-Nielsen Igor V. Khanaev Selmeg V. Bazarsadueva Reijo Käkelä Order of Authors Secondary Information: Funding Information: Russian Fundamental Research Fund Dr Larisa D. Radnaeva (14-05-00516 А; 2014-2016) Abstract: Lake Baikal is a unique freshwater environment with maximum depths over 1600m. The high water pressure at the lakebed strengthens the solidifying effect of low water temperature on animal tissue lipids, and thus the effective temperatures in the depths of the lake equal subzero temperatures in shallow waters. Cottoidei species has colonized the different water layers of the lake, and developed different ecology and physiology reflected in their tissue biochemistry. We studied by gas chromatography the composition of fatty acids (FAs), largely responsible for tissue lipid physical properties, in the white muscle tissue of 13 species of the Cottoidei fish; 5 benthic abyssal, 6 benthic eurybathic and 2 benthopelagic species. The FA profiles reflected habitat depth. -
Molecular Evolution and Functional Characterization of the Visual Pigment Proteins of the Great Bowerbird (Chlamydera Nuchalis) and Other Vertebrates
Molecular Evolution and Functional Characterization of the Visual Pigment Proteins of the Great Bowerbird (Chlamydera nuchalis) and Other Vertebrates by Ilke van Hazel A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Ecology and Evolutionary Biology University of Toronto © Copyright by Ilke van Hazel 2012 Molecular Evolution and Functional Characterization of the Visual Pigment Proteins of the Great Bowerbird (Chlamydera nuchalis) and Other Vertebrates Ilke van Hazel Doctor of Philosophy Department of Ecology and Evolutionary Biology University of Toronto 2012 Abstract Visual pigments are light sensitive receptors in the eye that form the basis of sensory visual transduction. This thesis presents three studies that explore visual pigment proteins in vertebrates using a number of computational and experimental methods in an evolutionary framework. The objective is not only to identify, but also to experimentally investigate the functional consequences of genetic variation in vertebrate visual pigments. The focus is on great bowerbirds (Chlamydera nuchalis), which are a model system in visual ecology due to their spectacular behaviour of building and decorating courtship bowers. There are 4 chapters: Chapter 1 introduces background information on visual pigments and vision in birds. Among visual pigment types, the short-wavelength-sensitive (SWS1) pigments have garnered particular interest due to the broad spectral range among vertebrates and the importance of UV signals in communication. Chapter 2 investigates the evolutionary history of SWS1 in vertebrates with a view toward its utility as a phylogenetic marker. Chapter 3 investigates SWS1 evolution and short-wavelength vision in birds, with particular focus on C. -
Guide to Monogenoidea of Freshwater Fish of Palaeartic and Amur Regions
GUIDE TO MONOGENOIDEA OF FRESHWATER FISH OF PALAEARTIC AND AMUR REGIONS O.N. PUGACHEV, P.I. GERASEV, A.V. GUSSEV, R. ERGENS, I. KHOTENOWSKY Scientific Editors P. GALLI O.N. PUGACHEV D. C. KRITSKY LEDIZIONI-LEDIPUBLISHING © Copyright 2009 Edizioni Ledizioni LediPublishing Via Alamanni 11 Milano http://www.ledipublishing.com e-mail: [email protected] First printed: January 2010 Cover by Ledizioni-Ledipublishing ISBN 978-88-95994-06-2 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, transmitted or utilized in any form or by any means, electonical, mechanical, photocopying or oth- erwise, without permission in writing from the publisher. Front cover: /Dactylogyrus extensus,/ three dimensional image by G. Strona and P. Galli. 3 Introduction; 6 Class Monogenoidea A.V. Gussev; 8 Subclass Polyonchoinea; 15 Order Dactylogyridea A.V. Gussev, P.I. Gerasev, O.N. Pugachev; 15 Suborder Dactylogyrinea: 13 Family Dactylogyridae; 17 Subfamily Dactylogyrinae; 13 Genus Dactylogyrus; 20 Genus Pellucidhaptor; 265 Genus Dogielius; 269 Genus Bivaginogyrus; 274 Genus Markewitschiana; 275 Genus Acolpenteron; 277 Genus Pseudacolpenteron; 280 Family Ancyrocephalidae; 280 Subfamily Ancyrocephalinae; 282 Genus Ancyrocephalus; 282 Subfamily Ancylodiscoidinae; 306 Genus Ancylodiscoides; 307 Genus Thaparocleidus; 308 Genus Pseudancylodiscoides; 331 Genus Bychowskyella; 332 Order Capsalidea A.V. Gussev; 338 Family Capsalidae; 338 Genus Nitzschia; 338 Order Tetraonchidea O.N. Pugachev; 340 Family Tetraonchidae; 341 Genus Tetraonchus; 341 Genus Salmonchus; 345 Family Bothitrematidae; 359 Genus Bothitrema; 359 Order Gyrodactylidea R. Ergens, O.N. Pugachev, P.I. Gerasev; 359 Family Gyrodactylidae; 361 Subfamily Gyrodactylinae; 361 Genus Gyrodactylus; 362 Genus Paragyrodactylus; 456 Genus Gyrodactyloides; 456 Genus Laminiscus; 457 Subclass Oligonchoinea A.V. -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3'). -
COMPARATIVE OSTEOLOGY and MYOLOGY of the SUPERFAMILY COTTOIDEA (PISCES: Title SCORPAENIFORMES), and ITS PHYLOGENETIC CLASSIFICATION)
COMPARATIVE OSTEOLOGY AND MYOLOGY OF THE SUPERFAMILY COTTOIDEA (PISCES: Title SCORPAENIFORMES), AND ITS PHYLOGENETIC CLASSIFICATION) Author(s) YABE, Mamoru Citation MEMOIRS OF THE FACULTY OF FISHERIES HOKKAIDO UNIVERSITY, 32(1), 1-130 Issue Date 1985-03 Doc URL http://hdl.handle.net/2115/21877 Type bulletin (article) File Information 32(1)_P1-130.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP COMPARATIVE OSTEOLOGY AND MYOLOGY OF THE SUPERFAMILY COTTOIDEA (PISCES: SCORPAENIFORMES), AND ITS PHYLOGENETIC CLASSIFICATION By Mamoru YABE Laboratory of Marine Zoology, Faculty of Fisheries, Hokkaido University, Hakodate, Japan Contents Page I. Introduction 1 II. Materials and methods ......................................................... 3 III. Acknowledgments································································ 6 IV. Systematic methodology···· ..................................................... 6 1. Recognition of the monophyletic group· ...................................... 6 2. Determination of the polarity of the character· ................................ 7 3. Inference of the branching pattern ........................................... 8 V. Comparative osteology .......................................................... 10 1. Circumorbital bones ........................................................ lO 2. Cranium···································································· 16 3. Jaws······································································ 30 4. Suspensorium -
Ulletin of the Sheries Research :)Ard of Canada ~Vi,~Qa1biv
ulletin of the sheries Research :)ard of Canada DFO - Librar / MPO - Bibliothèque ~Vi,~qA1BIV 12039422 ------- ----------------------------~1~1~1~/~1~Ÿ~AA-------------------- . r' 4/~ W~An1i i M~ ' ~~/~ ~ f . a I r!^.- ~- ~ A 1 ti 1 1► / w~~1 A 1\ I ■ 1`~ ! ■ s`~F,37~+~~#?~~- ► A~1 ► . A. ~ ~ A`WN%1 h 1\ ~ ~~ ~d ~2"ï:iŸ.-~~ZY _ _ - ~~ ~.. ~ ~_ t.~J.J ~~-~R_~~ `_~ I .. L a-~~~.. .......... ... - _ _ _ _ _ • _ _ / , *1 ----- 111&11~71 V A - - - - - - - - - - Ar / _ .L I■ It \ - -- - - - - - - - - - - ► Â I~ I /rh ow- ."0% 1~i! h 'I 11111111% M A _ 14 M !U!b_b~- - - - - r/IÎ1U/ rr*IU/~ MA1/bvr !J a i •ji J I r t M~ i n 0 qi ! w 11! t ► /0 l!r loi P!/ t h r `t /~ , M~Mw t/`~ ► f/ ~/~~ P t i0di 1 O ty t r ■e : /at~■ i i~ f I :t~ : l :ti I ` w, w Fïstieries and Envi Canada Environment Canada Environnement Canada Fisheries Service des pêches and Marine Service et des sciences de la mer cC AA 1 N late 0 e.ev- 41 s s à■ • /8RA ' e FONT RUSSIAN-ENGLISH DICTIONARY Bulletins of the Fisheries Research Board of Canada are designed to assess and interpret current knowledge in scientific fields pertinent to Canadian fisheries. The Board also publishes the Journal of the Fisheries Research Board of Canada in annual volumes of monthly issues, an Annual Report, and a biennial Review of in- vestigations. The Journal and Bulletins are for sale by Information Canada, Ottawa. -
Phylogeny and Taxonomy of Sculpins, Sandfishes, and Snailfishes
Molecular Phylogenetics and Evolution 79 (2014) 332–352 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Phylogeny and taxonomy of sculpins, sandfishes, and snailfishes (Perciformes: Cottoidei) with comments on the phylogenetic significance of their early-life-history specializations ⇑ W. Leo Smith a, , Morgan S. Busby b a Biodiversity Institute and Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66045, USA b Alaska Fisheries Science Center, National Marine Fisheries Service, 7600 Sand Point Way NE, Seattle, WA 98115, USA article info abstract Article history: Despite recent progress on the higher-level relationships of the Cottoidei and its familial components, Received 24 April 2014 phylogenetic conflict and uncertainty remain within the Cottoidea. We analyzed a dataset composed Revised 27 June 2014 of 4518 molecular (mitochondrial 12S, tRNA-Val, 16S, and cytochrome b and nuclear TMO-4c4, Histone Accepted 30 June 2014 H3, and 28S) and 72 morphological characters for 69 terminals to address cottoid intrarelationships. The Available online 8 July 2014 resulting well-resolved phylogeny was used to produce a revised taxonomy that is consistent with the available molecular and morphological data and recognizes six families: Agonidae, Cottidae, Jordaniidae, Keywords: Psychrolutidae, Rhamphocottidae, and Scorpaenichthyidae. The traditional Agonidae was expanded to Scorpaeniformes include traditional hemitripterids and Hemilepidotus. The traditional Cottidae was restricted to Leptocot- Perciformes Mail-cheeked fishes tus, Trachidermus, and the riverine, lacustrine, and Lake Baikal freshwater cottoids. Jordaniidae (Jordania Reproduction and Paricelinus) was separated from the traditional cottids; Psychrolutidae was expanded from the Larvae traditional grouping to include nearly all traditional marine cottids and the single species of bathy- lutichthyid. -
Title Fish Diversity in Freshwater and Brackish Water Ecosystems Of
Fish diversity in freshwater and brackish water ecosystems of Title Russia and adjacent waters DYLDIN, YURY V.; HANEL, LUBOMIR; FRICKE, RONALD; ORLOV, ALEXEI M.; ROMANOV, VLADIMIR Author(s) I.; PLESNIK, JAN; INTERESOVA, ELENA A.; VOROBIEV, DANIL S.; KOCHETKOVA, MARIA O. Publications of the Seto Marine Biological Laboratory (2020), Citation 45: 47-116 Issue Date 2020-06-10 URL http://hdl.handle.net/2433/251251 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University Publ. Seto Mar. Biol. Lab., 45: 47–116, 2020 (published online, 10 June 2020) Fish diversity in freshwater and brackish water ecosystems of Russia and adjacent waters YURY V. DYLDINa,*, LUBOMIR HANELb, RONALD FRICKEc, ALEXEI M. ORLOVa,d,e,f,g, VLADIMIR I. ROMANOVa, JAN PLESNIKh, ELENA A. INTERESOVAa,i, DANIL S.VOROBIEVa,j & MARIA O. KOCHETKOVAa aTomsk State University, Lenin Avenue 36, Tomsk, 634050, Russia bCharles University Prague, Faculty of Education, Department of Biology anD Environmental Education, M. D. Rettigové 47/4, 116 39, Prague 1, Czech Republic cIm Ramstal 76, 97922 LauDa-Königshofen, Germany dRussian FeDeral Research Institute of Fisheries and Oceanography (VNIRO), 17, V. Krasnoselskaya, Moscow, 107140 Russia eA.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, 33, Leninsky Prospekt, Moscow, 119071 Russia fDagestan State University, 43a, GaDzhiyev St., Makhachkala 367000 Russia gCaspian Institute of Biological Resources, Dagestan Scientific Center of the Russian AcaDemy of Sciences, 45, Gadzhiyev St., Makhachkala 367000 Russia hNature Conservation Agency of the Czech Republic, Kaplanova 1931/1, 148 00 Praha 11 – ChoDov, Czech Republic iNovosibirsk branch of the Russian FeDeral Research Institute of Fisheries anD Oceanography ("ZapSibNIRO"), 1, Pisarev St., 630091, Novosibirsk, Russia jJSC Tomsk Research and Oil and Gas Project Institute, Mira Avenue 72, Tomsk, 634027, Russia *Corresponding author.