Supplementary Table 2

Supplemental Table 2. Gene list of the "NF-kB signature" in the Agilent Human 1 cDNA microarray

Gene Name Acc. No. Gene Name Acc. No. ADAM with thrombospondin type 1 motif 1 AF207664 integrin, alpha 3 D01038 acid phosphatase 5, tartrate resistant X14618 keratin 18 BI160503 actin related protein 2/3 complex, subunit 1A BE545861 keratin 8 AI678859 activated leukocyte cell adhesion molecule Y10183 laminin receptor 1 BC005391 acyl-Coenzyme A dehydrogenase, long chain M74096 laminin, alpha 5 AB010099 annexin A2 BF084103 lipopolysaccharide-induced TNF factor U77396 annexin A7 NM_004034 lysine hydroxylase 3 AF046889 apical protein-like (Xenopus laevis) X83543 MAD U44378 V-ATPase B2 subunit BE899262 malate dehydrogenase 1 D55654 ATP-binding cassette, sub-family B AW949716 methylene tetrahydrofolate dehydrogenase X16396 AXL receptor tyrosine kinase X57019 MAPKKKK5 U77129 BCL2/adenovirus E1B interacting protein 3-like AL132665 mucin 1, transmembrane M34089 BH-protocadherin (brain-heart) AB006757 myosin IB AA807673 branched chain keto acid dehydrogenase E1 BE254024 ninjurin 1 BE938416 cadherin 1, type 1, E-cadherin (epithelial) AU125850 nuclear factor of kappa B p50 (p105) M58603 cadherin 3, type 1, P-cadherin X63629 ovarian carcinoma antigen CA125 D30756 calcineurin A beta M29551 Parkinson disease 7 BC008188 calmodulin 2 BG675712 PTEN BC005821 calponin 1, basic, smooth muscle AL046845 phosphoinositide-3-kinase BI769018 capping protein muscle Z-line, alpha 2 BC005338 plasminogen activator, tissue BC007231 catenin beta 1 X87838 progesterone receptor membrane component 1 Y12711 catenin, alpha 1 AW250105 proliferating cell nuclear antigen M15796 cathepsin D M11233 pyruvate dehydrogenase (lipoamide) alpha 1 J03575 cathepsin L2 AB001928 Rho kinase 1 U43195 caveolin 1 NM_001753 ribosomal protein S2 BC010165 CD97 antigen AI564271 ring finger protein 19 AB029316 chaperonin containing TCP1 BI089069 osteonectin J03040 thromboplastin, tissue factor AI085165 semaphorin 3E AB002329 collagen, type I, alpha 1 Z74615 semaphorin 3F U38276 collagen, type IV, alpha 2 X05562 SET translocation M93651 creatine kinase, mitochondrial 1 (ubiquitous) BG680747 solute carrier family 12, member 2 U30246 cyclin D2 D13639 SON DNA binding protein AW328025 dodecenoyl-Coenzyme A delta isomerase BC000762 special AT-rich sequence binding protein 1 BE266904 fibronectin 1 U42594 spectrin, beta AA131993 frizzled homolog 7 AB017365 src family associated phosphoprotein 2 AF051323 G protein-coupled receptor 56 BF593277 stem-loop (histone) binding protein AW150631 GalNAc-T3 X92689 sterol carrier protein 2 AI826287 glucuronidase, beta BG568800 STIP1 homology and U-Box containing protein 1 AL560352 heat shock 70kDa protein 8 BG504802 syndecan 2 J04621 heat shock 90kDa protein 1, alpha BC007989 syndecan binding protein (syntenin) AU139181 heat shock 90kDa protein 1, beta BG830543 syntrophin, alpha 1 U40571 High mobility group protein 1 (HMG-1) BG248148 topoisomerase (DNA) II alpha BF795918 Homo sapiens cDNA FLJ42284 fis BG775549 topoisomerase (DNA) II beta X68060 Homo sapiens LOC151103 (LOC151103) AW418782 transforming growth factor, beta 2 AW303586 Human transglutaminase mRNA AL552373 transmembrane 4 superfamily member 6 AF043906 hypothetical protein MGC16063 BC008044 tumor differentially expressed 2 AL137261 hypoxia-inducible factor 1, alpha subunit AF304431 tumor-associated calcium signal transducer 1 BE674290 immediate early response 3 AI911657 jun AI051628

1 insulin-like growth factor 2 receptor BG325212 c-Myc BG256267 zinc finger protein 9 M28372

2