Parrotfish Abundance and Selective Corallivory on a Belizean Coral Reef
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Regional Studies in Marine Science Reef Condition and Protection Of
Regional Studies in Marine Science 32 (2019) 100893 Contents lists available at ScienceDirect Regional Studies in Marine Science journal homepage: www.elsevier.com/locate/rsma Reef condition and protection of coral diversity and evolutionary history in the marine protected areas of Southeastern Dominican Republic ∗ Camilo Cortés-Useche a,b, , Aarón Israel Muñiz-Castillo a, Johanna Calle-Triviño a,b, Roshni Yathiraj c, Jesús Ernesto Arias-González a a Centro de Investigación y de Estudios Avanzados del I.P.N., Unidad Mérida B.P. 73 CORDEMEX, C.P. 97310, Mérida, Yucatán, Mexico b Fundación Dominicana de Estudios Marinos FUNDEMAR, Bayahibe, Dominican Republic c ReefWatch Marine Conservation, Bandra West, Mumbai 400050, India article info a b s t r a c t Article history: Changes in structure and function of coral reefs are increasingly significant and few sites in the Received 18 February 2019 Caribbean can tolerate local and global stress factors. Therefore, we assessed coral reef condition Received in revised form 20 September 2019 indicators in reefs within and outside of MPAs in the southeastern Dominican Republic, considering Accepted 15 October 2019 benthic cover as well as the composition, diversity, recruitment, mortality, bleaching, the conservation Available online 18 October 2019 status and evolutionary distinctiveness of coral species. In general, we found that reef condition Keywords: indicators (coral and benthic cover, recruitment, bleaching, and mortality) within the MPAs showed Coral reefs better conditions than in the unprotected area (Boca Chica). Although the comparison between the Caribbean Boca Chica area and the MPAs may present some spatial imbalance, these zones were chosen for Biodiversity the purpose of making a comparison with a previous baseline presented. -
Supplementary Material
Supplementary Material SM1. Post-Processing of Images for Automated Classification Imagery was collected without artificial light and using a fisheye lens to maximise light capture, therefore each image needed to be processed prior annotation in order to balance colour and to minimise the non-linear distortion introduced by the fisheye lens (Figure S1). Initially, colour balance and lenses distortion correction were manually applied on the raw images using Photoshop (Adobe Systems, California, USA). However, in order to optimize the manual post-processing time of thousands of images, more recent images from the Indian Ocean and Pacific Ocean were post- processed using compressed images (jpeg format) and an automatic batch processing in Photoshop and ImageMagick, the latter an open-source software for image processing (www.imagemagick.org). In view of this, the performance of the automated image annotation on images without colour balance was contrasted against images colour balanced using manual post-processing (on raw images) and the automatic batch processing (on jpeg images). For this evaluation, the error metric described in the main text (Materials and Methods) was applied to the images from following regions: the Maldives and the Great Barrier Reef (Figures S2 and S3). We found that the colour balance applied regardless the type of processing (manual vs automatic) had an important beneficial effect on the performance of the automated image annotation as errors were reduced for critical labels in both regions (e.g., Algae labels; Figures S2 and S3). Importantly, no major differences in the performance of the automated annotations were observed between manual and automated adjustments for colour balance. -
Bolbometopon Muricatum) in North Maluku Waters Muhammad J
DNA barcode and phylogenetics of green humphead parrotfish (Bolbometopon muricatum) in North Maluku waters Muhammad J. Achmad, Riyadi Subur, Supyan, Nebuchadnezzar Akbar Faculty of Fisheries and Marine Sciences, Khairun University, Ternate, North Maluku, Indonesia. Corresponding author: N. Akbar, [email protected] Abstract. The green humphead parrotfish (Bolbometopon muricatum) is one of the large species inhabiting coral reefs in North Maluku waters, Indonesia. The declining fish populations due to excessive fishing has caused the green humphead parrotfish to be listed in the Red List of IUCN in the vulnerable category since 2012. The species could be highly endangered, bordering extinction in the future. Studies on the genetic identification of green humphead parrotfish could be considered critical in the policy of sustainable conservation and fish culture. This research is designed for the identification and analysis of the genetic relationship of green humphead parrotfish based on the COI (cytochrome-c-oxidase subunit I) gene. DNA samples were collected from 4 locations in North Maluku, Ternate Island, Morotai Island, Bacan Island and Sanan Island. The DNA from samples was extracted and the COI gene was amplified using PCR (Polymerase Chain Reaction). Furthermore, the amplicon was sequenced to observe the similarities with the NCBI GenBank database. The results of this study showed that the green humphead parrotfish from this study had high similarities (98-100%) with the green humphead parrotfish with the reference access no. KY235362.1. Based on the phylogenetic tree, the green humphead parrotfish originating from North Maluku has a genetic relationship with the green humphead parrotfish from the database, but with different molecular characters. -
Pseudosiderastrea Formosa Sp. Nov. (Cnidaria: Anthozoa: Scleractinia)
Zoological Studies 51(1): 93-98 (2012) Pseudosiderastrea formosa sp. nov. (Cnidaria: Anthozoa: Scleractinia) a New Coral Species Endemic to Taiwan Michel Pichon1, Yao-Yang Chuang2,3, and Chaolun Allen Chen2,3,4,* 1Museum of Tropical Queensland, 70-102 Flinders Street, Townsville 4810, Australia 2Biodiversity Research Center, Academia Sinica, Nangang, Taipei 115, Taiwan 3Institute of Oceanography, National Taiwan Univ., Taipei 106, Taiwan 4Institute of Life Science, National Taitung Univ., Taitung 904, Taiwan (Accepted September 1, 2011) Michel Pichon, Yao-Yang Chuang, and Chaolun Allen Chen (2012) Pseudosiderastrea formosa sp. nov. (Cnidaria: Anthozoa: Scleractinia) a new coral species endemic to Taiwan. Zoological Studies 51(1): 93-98. Pseudosiderastrea formosa sp. nov. is a new siderastreid scleractinian coral collected in several localities in Taiwan. It lives on rocky substrates where it forms encrusting colonies. Results of morphological observations and molecular genetic analyses are presented. The new species is described and compared to P. tayamai and Siderastrea savignyana, and its morphological and phylogenic affinities are discussed. http://zoolstud.sinica.edu.tw/Journals/51.1/93.pdf Key words: Pseudosiderastrea formosa sp. nov., New species, Scleractinia, Siderastreid, Western Pacific Ocean. A siderastreid scleractinian coral was Pseudosiderastrea, described as P. formosa sp. collected from several localities around Taiwan nov. and nearby islands, where it is relatively rare. The specimens present some morphological similarities with Pseudosiderastrea tayamai Yabe MATERIAL AND METHODS and Sugiyama, 1935, the only species hitherto known from that genus, and with Siderastrea Specimens were collected by scuba diving at savignyana Milne Edwards and Haime, 1849, Wanlitung (21°59'48"N, 120°42'10"E) and the outlet which is the sole representative in the Indian of the 3rd nuclear power plant (21°55'51.38"N, Ocean of the genus Siderastrea de Blainville, 120°44'46.82"E) on the southeastern coast 1830. -
Sharkcam Fishes
SharkCam Fishes A Guide to Nekton at Frying Pan Tower By Erin J. Burge, Christopher E. O’Brien, and jon-newbie 1 Table of Contents Identification Images Species Profiles Additional Info Index Trevor Mendelow, designer of SharkCam, on August 31, 2014, the day of the original SharkCam installation. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 5th edition by Erin J. Burge, Christopher E. O’Brien, and jon-newbie is licensed under the Creative Commons Attribution-Noncommercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/. For questions related to this guide or its usage contact Erin Burge. The suggested citation for this guide is: Burge EJ, CE O’Brien and jon-newbie. 2020. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 5th edition. Los Angeles: Explore.org Ocean Frontiers. 201 pp. Available online http://explore.org/live-cams/player/shark-cam. Guide version 5.0. 24 February 2020. 2 Table of Contents Identification Images Species Profiles Additional Info Index TABLE OF CONTENTS SILVERY FISHES (23) ........................... 47 African Pompano ......................................... 48 FOREWORD AND INTRODUCTION .............. 6 Crevalle Jack ................................................. 49 IDENTIFICATION IMAGES ...................... 10 Permit .......................................................... 50 Sharks and Rays ........................................ 10 Almaco Jack ................................................. 51 Illustrations of SharkCam -
Coral Species ID
Coral Species ID Colony shape (branching, mound, plates, column, crust, etc) Colony surface (bumpy, smooth, ridges) Polyp/Corallite Size (small, big) Polyp/Corallite shape (round/elliptical, irregular, y- shaped, „ innies vs outies‟ ridge/valley) Polyp color (green, brown, tan, yellow, olive, red) Different Corallite Shapes and Sizes Examples of Massive Stony Corals Montastraea Montastraea Suleimán © W.Harrigan © faveolata cavernosa S. © Diploria strigosa Porites astreoides © M. White© Montastraea faveolata MFAV Small, round polyps Form very large mounds, plates or crusts (to 4-5 m /12-15 ft) © S. ThorntonS. © Montastraea faveolata MFAV Surfaces smooth, ridged, or with bumps aligned in vertical rows © W. Harrigan © M. Weber © R. Steneck Montastraea faveolata MFAV Colonies are flattened, massive- plates with smooth surfaces under conditions of low light. Montastrea annularis MANN How similar to M. faveolata Small polyps Smooth surface How different Colonies are subdivided into numerous mounds or columns with live polyps at their summits. Plates at colony bases under low light conditions. (to 3-4 m/9-12 ft) Which is which? M. annularis M. faveolata MANN MFAV Montastrea franksi MFRA How similar to M. faveolata Small polyps and bumps Close-up How different Some polyps in bumps are larger, irregularly shaped, and may lack zooxanthellae. More aggressive spatial competitor. © P. Humann Montastrea franksi MFRA How similar to M. faveolata Form mounds, short columns, crusts, and/or plates. How different Bumps are scattered over colony surface. (to 3-4 m/9-12 ft) Montastrea franksi MFRA Flattened, massive plate morphology in low light conditions. Solenastrea bournoni SBOU How similar to M. annularis Small round polyps Mounds How different Lighter colors in life, Walls of some polyps are more distinct (“outies”) Bumpy colony surface (to ~1/2 m/<20 in) Solenastrea hyades SHYA How similar to S. -
Bhead Parrotfish Listing Petition
PETITION TO LIST THE Bumphead Parrotfish (Bolbometopon muricatum) UNDER THE U.S. ENDANGERED SPECIES ACT Photo: J.E. Maragos, USFWS Petition Submitted to the U.S. Secretary of Commerce, Acting Through the National Oceanic and Atmospheric Administration Fisheries Service & the U.S. Secretary of Interior, Acting through the U.S. Fish and Wildlife Service Petitioner: WildEarth Guardians 312 Montezuma Ave. Santa Fe, New Mexico 87501 (505) 988-9126 December 31, 2009 WildEarth Guardians Petition to List 1 the Bumphead Parrotfish Under the ESA Executive Summary The Bumphead Parrotfish (Bolbometopon muricatum) is a marine fish that feeds primarily on coral. It occurs in many countries in the Pacific and Indo-Pacific, including islands governed by the United States. While wide-ranging, scientists describe it as declining across its range and nearly eliminated from many areas. The primary threat has been overfishing, to which this fish is especially vulnerable due to its behavior of sleeping in large groups at night near reefs. Growing threats are coral bleaching and ocean acidification, both due to climate change. The Bumphead Parrotfish’s fate is tied to coral, as each fish consumes over 5 tons of coral every year. Coral consumed by the Parrotfish is excreted as coral sand, which is important to sustain the coral ecosystem, as well as providing beautiful white sand beaches enjoyed by tourists. Given the economic importance of tourism in the range of the Parrotfish, this species provides an invaluable ecosystem service to humans. An even more important way in which Parrotfish benefit humans is by protecting coral reef ecosystems, which are vital to safeguarding human coastal populations from impacts of extreme weather events. -
Reproduction and Population of Porites Divaricata at Rodriguez Key: the Lorf Ida Keys, USA John Mcdermond Nova Southeastern University, [email protected]
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 1-1-2014 Reproduction and Population of Porites divaricata at Rodriguez Key: The lorF ida Keys, USA John McDermond Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography Commons Share Feedback About This Item NSUWorks Citation John McDermond. 2014. Reproduction and Population of Porites divaricata at Rodriguez Key: The Florida Keys, USA. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, Oceanographic Center. (17) https://nsuworks.nova.edu/occ_stuetd/17. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. NOVA SOUTHEASTERN UNIVERSITY OCEANOGRAPHIC CENTER Reproduction and Population of Porites divaricata at Rodriguez Key: The Florida Keys, USA By: John McDermond Submitted to the faculty of Nova Southeastern University Oceanographic Center in partial fulfillment of the requirements for the degree of Master of Science with a specialty in Marine Biology Nova Southeastern University i Thesis of John McDermond Submitted in Partial Fulfillment of the Requirements for the Degree of Masters of Science: Marine Biology Nova Southeastern University Oceanographic Center Major Professor: __________________________________ -
Life on the Coral Reef
Coral Reef Teacher’s Guide Life on the Coral Reef Life on the Coral Reef THE CORAL REEF ECOSYSTEM The muddy silt drifts out to sea, covering the nearby Coral reefs provide the basis for the most productive coral reefs. Some corals can remove the silt, but many shallow water ecosystem in the world. An ecosystem cannot. If the silt is not washed off within a short pe- is a group of living things, such as coral, algae and riod of time by the current, the polyps suffocate and fishes, along with their non-living environment, such die. Not only the rainforest is destroyed, but also the as rocks, water, and sand. Each influences the other, neighboring coral reef. and both are necessary for the successful maintenance of life. If one is thrown out of balance by either natural Reef Zones or human-made causes, then the survival of the other Coral reefs are not uniform, but are shaped by the is seriously threatened. forces of the sea and the structure of the sea floor into DID YOU KNOW? All of the Earth’s ecosystems are a series of different parts or reef zones. Understand- interrelated, forming a shell of life that covers the ing these zones is useful in understanding the ecol- entire planet – the biosphere. For instance, if too many ogy of coral reefs. Keep in mind that these zones can trees are cut down in the rainforest, soil from the for- blend gradually into one another, and that sometimes est is washed by rain into rivers that run to the ocean. -
Sharkcam Fishes a Guide to Nekton at Frying Pan Tower by Erin J
SharkCam Fishes A Guide to Nekton at Frying Pan Tower By Erin J. Burge, Christopher E. O’Brien, and jon-newbie 1 Table of Contents Identification Images Species Profiles Additional Information Index Trevor Mendelow, designer of SharkCam, on August 31, 2014, the day of the original SharkCam installation SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 3rd edition by Erin J. Burge, Christopher E. O’Brien, and jon-newbie is licensed under the Creative Commons Attribution-Noncommercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/. For questions related to this guide or its usage contact Erin Burge. The suggested citation for this guide is: Burge EJ, CE O’Brien and jon-newbie. 2018. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 3rd edition. Los Angeles: Explore.org Ocean Frontiers. 169 pp. Available online http://explore.org/live-cams/player/shark-cam. Guide version 3.0. 26 January 2018. 2 Table of Contents Identification Images Species Profiles Additional Information Index TABLE OF CONTENTS FOREWORD AND INTRODUCTION.................................................................................. 8 IDENTIFICATION IMAGES .......................................................................................... 11 Sharks and Rays ................................................................................................................................... 11 Table: Relative frequency of occurrence and relative size .................................................................... -
Andrew David Dorka Cobián Rojas Felicia Drummond Alain García Rodríguez
CUBA’S MESOPHOTIC CORAL REEFS Fish Photo Identification Guide ANDREW DAVID DORKA COBIÁN ROJAS FELICIA DRUMMOND ALAIN GARCÍA RODRÍGUEZ Edited by: John K. Reed Stephanie Farrington CUBA’S MESOPHOTIC CORAL REEFS Fish Photo Identification Guide ANDREW DAVID DORKA COBIÁN ROJAS FELICIA DRUMMOND ALAIN GARCÍA RODRÍGUEZ Edited by: John K. Reed Stephanie Farrington ACKNOWLEDGMENTS This research was supported by the NOAA Office of Ocean Exploration and Research under award number NA14OAR4320260 to the Cooperative Institute for Ocean Exploration, Research and Technology (CIOERT) at Harbor Branch Oceanographic Institute-Florida Atlantic University (HBOI-FAU), and by the NOAA Pacific Marine Environmental Laboratory under award number NA150AR4320064 to the Cooperative Institute for Marine and Atmospheric Studies (CIMAS) at the University of Miami. This expedition was conducted in support of the Joint Statement between the United States of America and the Republic of Cuba on Cooperation on Environmental Protection (November 24, 2015) and the Memorandum of Understanding between the United States National Oceanic and Atmospheric Administration, the U.S. National Park Service, and Cuba’s National Center for Protected Areas. We give special thanks to Carlos Díaz Maza (Director of the National Center of Protected Areas) and Ulises Fernández Gomez (International Relations Officer, Ministry of Science, Technology and Environment; CITMA) for assistance in securing the necessary permits to conduct the expedition and for their tremendous hospitality and logistical support in Cuba. We thank the Captain and crew of the University of Miami R/V F.G. Walton Smith and ROV operators Lance Horn and Jason White, University of North Carolina at Wilmington (UNCW-CIOERT), Undersea Vehicle Program for their excellent work at sea during the expedition. -
A Review of the Life History Characteristics of Silk Snapper, Queen Snapper, and Redtail Parrotfish
A review of the life history characteristics of silk snapper, queen snapper, and redtail parrotfish Meaghan D. Bryan, Maria del Mar Lopez, and Britni Tokotch SEDAR26-DW-01 Date Submitted: 11 May 2011 SEDAR26 – DW - 01 A review of the life history characteristics of silk snapper, queen snapper, and redtail parrotfish by Meaghan D. Bryan1, Maria del Mar Lopez2, and Britni Tokotch2 U.S. Department of Commerce National Oceanic and Atmospheric Administration (NOAA) National Marine Fisheries Service (NMFS) 1Southeast Fisheries Science Center (SFSC) Sustainable Fisheries Division (SFD) Gulf and Caribbean Fisheries Assessment Unit 75 Virginia Beach Drive Miami, Florida 33149 2Southeast Regional Office Sustainable Fisheries Division (SFD) Caribbean Operations Branch 263 13th Avenue South St. Petersburg, Florida 33701 May 2011 Caribbean Southeast Data Assessment Review Workshop Report SEDAR26-DW-01 Sustainable Fisheries Division Contribution No. SFD-2011-008 1 Introduction The purpose of this report is to review and assemble life history information for Etelis oculatus (queen snapper), Lutjanus vivanus (silk snapper), and Sparisoma chrysopterum (redtail parrotfish) in the US Caribbean. Photos of the three species can be found in Figures 1-3. Life history information for these species was synthesized from published work in the grey and primary literature, as well as FishBase (Froese and Pauly 2011). Given the paucity of available information for redtail parrotfish, the review was widened to include Sparisoma viride (stoplight parrotfish), Sparisoma aurofrenatum (redband parrotfish), Sparisoma rubripinne (redfin parrotfish), and Scarus vetula (queen parrotfish). The report is organized by species and each section focuses on key aspects describing the relationships among age, growth and reproduction.