The Darkness Syndrome in Subsurface-Shallow and Deep-Sea Dwelling Ostracoda (Crustacea)
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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
Ostracoda an Introduction.Pdf
The Ostracoda (from Wikipedia, 5/5/2009: http://en.wikipedia.org/wiki/Ostracod) Ostracoda is a class of the Crustacea, sometimes known as the seed shrimp because of their appearance. Ostracods are small crustaceans, typically around one mm in size, but varying between 0.2 to 30 mm, laterally compressed and protected by a bivalve-like, chitinous or calcareous valve or "shell". The hinge of the two valves is in the upper, dorsal region of the body. Some 65,000 species (13,000 of which are extant taxa) have been identified, grouped into several orders. This group may not be monophyletic. Ostracod taxa are grouped into a Class based on gross morphology. Ecologically, marine ostracods can be part of the zooplankton or (most commonly) they are part of the benthos, living on or inside the upper layer of the sea floor. Many ostracods, especially the Podocopida, are also found in fresh water and some are known from humid continental forest soils. The body consists of a cephalon (head), separated from the thorax by a slight constriction. The segmentation is unclear. The abdomen is regressed or absent whereas the adult gonads are relatively large. There are 5–8 pairs of appendages. The branchial plates are responsible for oxygenation. The epidermal cells may also secrete calcium carbonate after the chitinous layer is formed, resulting in a chalk layer enveloped by chitin. This calcification is not equally pronounced in all orders. During every instar transition, the old carapace (chitinous and calcified) is rejected and a new, larger is formed and calcified. The outer lamella calcifies completely, while the inner lamella calcifies partially, with the rest remaining chitinous. -
From an Anchialine Lava Tube in Lanzarote, Canary Islands
Ostracoda (Halocypridina, Cladocopina) from an Anchialine Lava Tube in Lanzarote, Canary Islands LOUIS S. KORN1CKER and THOMAS M. ILIFFE SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 568 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Folklife Studies Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world of science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
Taxonomy of Quaternary Deep-Sea Ostracods from the Western North Atlantic Ocean
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln USGS Staff -- Published Research US Geological Survey 2009 Taxonomy Of Quaternary Deep-Sea Ostracods From The Western North Atlantic Ocean Moriaki Yasuhara National Museum of Natural History, Smithsonian Institution, [email protected] Hisayo Okahashi National Museum of Natural History, Smithsonian Institution, [email protected] Thomas M. Cronin U.S. Geological Survey, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/usgsstaffpub Part of the Earth Sciences Commons Yasuhara, Moriaki; Okahashi, Hisayo; and Cronin, Thomas M., "Taxonomy Of Quaternary Deep-Sea Ostracods From The Western North Atlantic Ocean" (2009). USGS Staff -- Published Research. 242. https://digitalcommons.unl.edu/usgsstaffpub/242 This Article is brought to you for free and open access by the US Geological Survey at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in USGS Staff -- Published Research by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. [Palaeontology, Vol. 52, Part 4, 2009, pp. 879–931] TAXONOMY OF QUATERNARY DEEP-SEA OSTRACODS FROM THE WESTERN NORTH ATLANTIC OCEAN by MORIAKI YASUHARA*, HISAYO OKAHASHI* and THOMAS M. CRONIN *Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, MRC 121, PO Box 37012, Washington, DC 20013-7012, USA; e-mails: [email protected] or [email protected] (M.Y.), [email protected] (H.O.) U.S. Geological Survey, -
Contributions in BIOLOGY and GEOLOGY
MILWAUKEE PUBLIC MUSEUM Contributions In BIOLOGY and GEOLOGY Number 51 November 29, 1982 A Compendium of Fossil Marine Families J. John Sepkoski, Jr. MILWAUKEE PUBLIC MUSEUM Contributions in BIOLOGY and GEOLOGY Number 51 November 29, 1982 A COMPENDIUM OF FOSSIL MARINE FAMILIES J. JOHN SEPKOSKI, JR. Department of the Geophysical Sciences University of Chicago REVIEWERS FOR THIS PUBLICATION: Robert Gernant, University of Wisconsin-Milwaukee David M. Raup, Field Museum of Natural History Frederick R. Schram, San Diego Natural History Museum Peter M. Sheehan, Milwaukee Public Museum ISBN 0-893260-081-9 Milwaukee Public Museum Press Published by the Order of the Board of Trustees CONTENTS Abstract ---- ---------- -- - ----------------------- 2 Introduction -- --- -- ------ - - - ------- - ----------- - - - 2 Compendium ----------------------------- -- ------ 6 Protozoa ----- - ------- - - - -- -- - -------- - ------ - 6 Porifera------------- --- ---------------------- 9 Archaeocyatha -- - ------ - ------ - - -- ---------- - - - - 14 Coelenterata -- - -- --- -- - - -- - - - - -- - -- - -- - - -- -- - -- 17 Platyhelminthes - - -- - - - -- - - -- - -- - -- - -- -- --- - - - - - - 24 Rhynchocoela - ---- - - - - ---- --- ---- - - ----------- - 24 Priapulida ------ ---- - - - - -- - - -- - ------ - -- ------ 24 Nematoda - -- - --- --- -- - -- --- - -- --- ---- -- - - -- -- 24 Mollusca ------------- --- --------------- ------ 24 Sipunculida ---------- --- ------------ ---- -- --- - 46 Echiurida ------ - --- - - - - - --- --- - -- --- - -- - - --- -
Cypris 2016-2017
CYPRIS 2016-2017 Illustrations courtesy of David Siveter For the upper image of the Silurian pentastomid crustacean Invavita piratica on the ostracod Nymphateline gravida Siveter et al., 2007. Siveter, David J., D.E.G. Briggs, Derek J. Siveter, and M.D. Sutton. 2015. A 425-million-year- old Silurian pentastomid parasitic on ostracods. Current Biology 23: 1-6. For the lower image of the Silurian ostracod Pauline avibella Siveter et al., 2012. Siveter, David J., D.E.G. Briggs, Derek J. Siveter, M.D. Sutton, and S.C. Joomun. 2013. A Silurian myodocope with preserved soft-parts: cautioning the interpretation of the shell-based ostracod record. Proceedings of the Royal Society London B, 280 20122664. DOI:10.1098/rspb.2012.2664 (published online 12 December 2012). Watermark courtesy of Carin Shinn. Table of Contents List of Correspondents Research Activities Algeria Argentina Australia Austria Belgium Brazil China Czech Republic Estonia France Germany Iceland Israel Italy Japan Luxembourg New Zealand Romania Russia Serbia Singapore Slovakia Slovenia Spain Switzerland Thailand Tunisia United Kingdom United States Meetings Requests Special Publications Research Notes Photographs and Drawings Techniques and Methods Awards New Taxa Funding Opportunities Obituaries Horst Blumenstengel Richard Forester Franz Goerlich Roger Kaesler Eugen Kempf Louis Kornicker Henri Oertli Iraja Damiani Pinto Evgenii Schornikov Michael Schudack Ian Slipper Robin Whatley Papers and Abstracts (2015-2007) 2016 2017 In press Addresses Figure courtesy of Francesco Versino, -
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group
The Marine Biodiversity and Fisheries Catches of the Pitcairn Island Group THE MARINE BIODIVERSITY AND FISHERIES CATCHES OF THE PITCAIRN ISLAND GROUP M.L.D. Palomares, D. Chaitanya, S. Harper, D. Zeller and D. Pauly A report prepared for the Global Ocean Legacy project of the Pew Environment Group by the Sea Around Us Project Fisheries Centre The University of British Columbia 2202 Main Mall Vancouver, BC, Canada, V6T 1Z4 TABLE OF CONTENTS FOREWORD ................................................................................................................................................. 2 Daniel Pauly RECONSTRUCTION OF TOTAL MARINE FISHERIES CATCHES FOR THE PITCAIRN ISLANDS (1950-2009) ...................................................................................... 3 Devraj Chaitanya, Sarah Harper and Dirk Zeller DOCUMENTING THE MARINE BIODIVERSITY OF THE PITCAIRN ISLANDS THROUGH FISHBASE AND SEALIFEBASE ..................................................................................... 10 Maria Lourdes D. Palomares, Patricia M. Sorongon, Marianne Pan, Jennifer C. Espedido, Lealde U. Pacres, Arlene Chon and Ace Amarga APPENDICES ............................................................................................................................................... 23 APPENDIX 1: FAO AND RECONSTRUCTED CATCH DATA ......................................................................................... 23 APPENDIX 2: TOTAL RECONSTRUCTED CATCH BY MAJOR TAXA ............................................................................ -
The Taxonomy and Biogeography of Macrofaunal Ostracod Crustaceans
The taxonomy and biogeography of macrofaunal ostracod crustaceans, with focus on the abyssal benthic Pacific fauna relevant to the CCFZ Ivana Karanovic Hanyang University, Department of Life Science, College of Natural Sciences, Seoul 133-791, Korea University of Tasmania, IMAS, Hobart, TAS, 7001, Australia e-mail: [email protected] Few words about myself Italy(Salerno, 2 years) Serbia (Novi Sad, born) Australia (Perth & Hobart, 10 years) Germany (Hamburg, 2 years) South Korea (Seoul, 3.5 years) • Started working on ostracods 15 years ago • Worked on faunas from all continents (including Antarctica) • and from all environments: from freshwater puddles to deep sea • I don’t particularly like ostracods • I like the fact that ostracods give insight into many aspects of biology General information on ostracods • Named in 1802 by Latreille • Name comes from the Greek óstrakon, meaning shell or tile • Common name in English: “mussel shrimp” or “seed shrimp” • In German it is “Muschelkrebse” • Live in all aquatic habitats on the planet Fossil record Systematics • Previously in the class Maxillopoda • Currently recognized as one of the 7 classes of the phylum Crustacea Currently divided into two subclasses 1. Myodocopa 2. Podocopa Systematics cont. 4a. 1. Subclass Myodocopa 1. Order Myodocopina 2. Order Halocyprida 4b. a) Suborder Halocypridina b) Suborder Cladocopina 2a. Subclass Podocopa 3. Order Platycopida 4. Order Podocopida 4c. a) Suborder Bairdiocopina b) Suborder Cytherocopina 2b. c) Suborder Darwinulocopina d) Suborder Cypridocopina 4d. e) Suborder Sigilliocopina 3. Photo credits: 4e. 1, 2: S.N. Brandao 3: Brandao & Yasuhara 4b, c: D. Keyser 4e: From Maddocks (1972) Morphology a. -
Two New Xylophile Cytheroid Ostracods (Crustacea) from Kuril
Arthropod Systematics & Phylogeny 79, 2021, 171–188 | DOI 10.3897/asp.79.e62282 171 Two new xylophile cytheroid ostracods (Crustacea) from Kuril-Kamchatka Trench, with remarks on the systematics and phylogeny of the family Keysercytheridae, Limno cy- theridae, and Paradoxostomatidae Hayato Tanaka1, Hyunsu Yoo2, Huyen Thi Minh Pham3, Ivana Karanovic3,4 1 Tokyo Sea Life Park, 6-2-3 Rinkai-cho, Edogawa-ku, Tokyo 134-8587, Japan 2 Marine Environmental Research and Information Laboratory (MERIL), 17, Gosan-ro, 148 beon-gil, Gun-po-si, Gyoenggi-do, 15180, South Korea 3 Department of Life Science, Research Institute for Convergence of Basic Science, Hanyang University, Seoul 04763, South Korea 4 Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia http://zoobank.org/E29CD94D-AF08-45D2-A319-674F8282D7F2 Corresponding author: Hayato Tanaka ([email protected]) Received 20 December 2020 Accepted 11 May 2021 Academic Editors Anna Hundsdörfer, Martin Schwentner Published 9 June 2021 Citation: Tanaka H, Yoo H, Pham HTM, Karanovic I (2021) Two new xylophile cytheroid ostracods (Crustacea) from Kuril-Kamchatka Trench, with remarks on the systematics and phylogeny of the family Keysercytheridae, Limnocytheridae, and Paradoxostomatidae. Arthropod Systematics & Phylogeny 79: 171–188. https://doi.org/10.3897/asp.79.e62282 Abstract Keysercythere reticulata sp. nov. and Redekea abyssalis sp. nov., collected from the wood fall submerged in the Kuril-Kamchatka Trench (Northwestern Pacific), are only the second records of the naturally occurring, wood-associated ostracod fauna from a depth of over 5000 m. At the same time, K. reticulata is the second and R. abyssalis is the third representative of their respective genera. -
Mesozooplankton of the Arabian Sea and the Bay of Bengal with Special Reference to Planktonic Ostracods
Mesozooplankton of the Arabian Sea and the Bay of Bengal with special reference to planktonic ostracods fflwéa aaflrzzlledla [fie Cocfiin University qf Science and"1”eclino[ogy ®or:tor qffliilbsopfiy in flvtarine Science ?&za’e2z life Taculiy of Mafine Sciences 54; P. JASMINE, M.Sc., B.Ed. NATIONAL INSTITUTE OF OCEANOGRAPHY REGIONAL CENTRE, KOCHI-682018 January 2009 Qeclaraiion I hereby declare that the thesis entitled “Mesozooplankton of the Arabian Sea and the Bay of Bengal with special reference to planktonic ostracods” is an authentic record of the research carried out by me, under the supervision of Dr. Saramma U Panampunnayil, Scientist F, National Institute of Oceanography, Regional Centre, Kochi- 18, in partial fulfillment of the requirement for the Ph.D Degree of the Cochin University of Science and Technology under the faculty of Marine Sciences and that no part of this has been presented before for any other degree, diploma or associateship in any university. / Koch_i-1816-01-2009 4 @er1ifin:ate I herby certify that the thesis entitled “Mesozooplankt0n of the Arabian Sea and the Bay of Bengal with special reference to planktonic ostracods” submitted by P. Jasmine, Research scholar (Reg. No. 2731), National Institute of Oceanography, Regional centre, Kochi-18, is an authentic record of research carried out by her under my supervision, in partial fulfillment of the requirement for the Ph.D Degree of the Cochin University of Science and Technology in the faculty of Marine Sciences and that no part thereof has been previously formed the basis for the award of any degree, diploma or associateship in any university. -
Crustacea: Ostracoda) De Pozas Temporales
Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales. ESIS OCTORAL T D Josep Antoni Aguilar Alberola Departament de Microbiologia i Ecologia Universitat de València Programa de doctorat en Biodiversitat i Biologia Evolutiva Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales. Tesis doctoral presentada por Josep Antoni Aguilar Alberola 2013 Dirigida por Francesc Mesquita Joanes Imagen de cubierta: Vista lateral de la fase eclosionadora de Heterocypris bosniaca. Más detalles en el capítulo V. Tesis titulada "Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales" presentada por JOSEP ANTONI AGUILAR ALBEROLA para optar al grado de Doctor en Ciencias Biológicas por la Universitat de València. Firmado: Josep Antoni Aguilar Alberola Tesis dirigida por el Doctor en Ciencias Biológicas por la Universitat de València, FRANCESC MESQUITA JOANES. Firmado: F. Mesquita i Joanes Profesor Titular de Ecología Universitat de València A Laura, Paco, i la meua família Resumen Los ostrácodos son un grupo de pequeños crustáceos con amplia distribución mundial, cuyo cuerpo está protegido por dos valvas laterales que suelen preservarse con facilidad en el sedimento. En el presente trabajo se muestra la primera cita del ostrácodo Heterocypris bosniaca Petkowski, Scharf y Keyser, 2000 para la Península Ibérica. Se trata de una especie de cipridoideo muy poco conocida que habita pozas de aguas temporales. Se descubrió el año 2000 en Bosnia y desde entonces solo se ha reportado su presencia en Israel (2004) y en Valencia (presente trabajo). -
Fossil Calibrations for the Arthropod Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/044859; this version posted June 10, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. FOSSIL CALIBRATIONS FOR THE ARTHROPOD TREE OF LIFE AUTHORS Joanna M. Wolfe1*, Allison C. Daley2,3, David A. Legg3, Gregory D. Edgecombe4 1 Department of Earth, Atmospheric & Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 2 Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK 3 Oxford University Museum of Natural History, Parks Road, Oxford OX1 3PZ, UK 4 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK *Corresponding author: [email protected] ABSTRACT Fossil age data and molecular sequences are increasingly combined to establish a timescale for the Tree of Life. Arthropods, as the most species-rich and morphologically disparate animal phylum, have received substantial attention, particularly with regard to questions such as the timing of habitat shifts (e.g. terrestrialisation), genome evolution (e.g. gene family duplication and functional evolution), origins of novel characters and behaviours (e.g. wings and flight, venom, silk), biogeography, rate of diversification (e.g. Cambrian explosion, insect coevolution with angiosperms, evolution of crab body plans), and the evolution of arthropod microbiomes. We present herein a series of rigorously vetted calibration fossils for arthropod evolutionary history, taking into account recently published guidelines for best practice in fossil calibration.