Advances in MARINE BIOLOGY
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San Gabriel Chestnut ESA Petition
BEFORE THE SECRETARY OF THE INTERIOR PETITION TO THE U.S. FISH AND WILDLIFE SERVICE TO PROTECT THE SAN GABRIEL CHESTNUT SNAIL UNDER THE ENDANGERED SPECIES ACT © James Bailey CENTER FOR BIOLOGICAL DIVERSITY Notice of Petition Ryan Zinke, Secretary U.S. Department of the Interior 1849 C Street NW Washington, D.C. 20240 [email protected] Greg Sheehan, Acting Director U.S. Fish and Wildlife Service 1849 C Street NW Washington, D.C. 20240 [email protected] Paul Souza, Director Region 8 U.S. Fish and Wildlife Service Pacific Southwest Region 2800 Cottage Way Sacramento, CA 95825 [email protected] Petitioner The Center for Biological Diversity is a national, nonprofit conservation organization with more than 1.3 million members and supporters dedicated to the protection of endangered species and wild places. http://www.biologicaldiversity.org Failure to grant the requested petition will adversely affect the aesthetic, recreational, commercial, research, and scientific interests of the petitioning organization’s members and the people of the United States. Morally, aesthetically, recreationally, and commercially, the public shows increasing concern for wild ecosystems and for biodiversity in general. 1 November 13, 2017 Dear Mr. Zinke: Pursuant to Section 4(b) of the Endangered Species Act (“ESA”), 16 U.S.C. §1533(b), Section 553(3) of the Administrative Procedures Act, 5 U.S.C. § 553(e), and 50 C.F.R. §424.14(a), the Center for Biological Diversity and Tierra Curry hereby formally petition the Secretary of the Interior, through the United States Fish and Wildlife Service (“FWS”, “the Service”) to list the San Gabriel chestnut snail (Glyptostoma gabrielense) as a threatened or endangered species under the Endangered Species Act and to designate critical habitat concurrently with listing. -
788 RR MAKAROV & AI DANILOV (Eds.)
788 R. R. MAKAROV& A. I. DANILOV(eds.), Investigations of the Weddell Gyre. Oceanographic conditions and peculiarities of the development of plankton communities: 140-160 [in Rus- sian]. (VNIRO Publication, Moscow). MAKAROV,R. R. & L. L. MENSHENINA,1992. Larvae of euphausiids off Queen Maud Land. Polar Biology, 11: 515-523. MAKAROV,R. R., L. L. MENSHENINA& V. I. LATOGURSKY,1993. Fishery of Antarctic krill (Euphausia superba Dana) and problems of rational exploitation of its resources. Antarctica, 32: 111-124 [in Russian]. MAKAROV,R. R. & V. A. SPIRIDONOV,1993. Life cycle and distribution of Antarctic krill. Some results of studies and problems. In: N. M. VORONINA(ed.), Pelagic ecosystems of the Southern Ocean: 158-168 [in Russian]. (Nauka, Moscow). BATHMANN,U. V., R. R. MAKAROV,V. A. SPIRIDONOV& G. ROHARDT,1993. Winter distribution and overwintering strategies of the Antarctic copepod species Calanoides acutus, Rhincalanus gigas and Calanus propinquus (Crustacea, Calanoida) in the Weddell Sea. Polar Biology, 13: 333-346. APPLICATION OF ULTRASOUND TECHNOLOGY TO CRUSTACEAN PHYSIOLOGY; MONITORING CARDIAC AND SCAPHOGNATHITE RATES IN BRACHYURA BY PAUL A. HAEFNER, JR. Rochester Institute of Technology, Department of Biology, Rochester, New York 14623, U.S.A. Machines used in diagnostic radiology and cardiology have application to crus- tacean organ systems. Gribble & Reynolds (1993), and Gribble (1994) demon- strated the use of angiography to describe cardiovascular function in a crab. In January 1994, I made preliminary ultrasound scans of a live crayfish. Although sagittal and transverse series of images produced little resolution of internal or- gans, movements of the heart and scaphognathites were easily detected. This paper reveals the ability to monitor the activities of these organs in brachyuran crabs. -
Fishes of the Eastern Ross Sea, Antarctica
Polar Biol (2004) 27: 637–650 DOI 10.1007/s00300-004-0632-2 REVIEW Joseph Donnelly Æ Joseph J. Torres Tracey T. Sutton Æ Christina Simoniello Fishes of the eastern Ross Sea, Antarctica Received: 26 November 2003 / Revised: 16 April 2004 / Accepted: 20 April 2004 / Published online: 16 June 2004 Ó Springer-Verlag 2004 Abstract Antarctic fishes were sampled with 41 midwater in Antarctica is dominated by a few fish families and 6 benthic trawls during the 1999–2000 austral (Bathylagidae, Gonostomatidae, Myctophidae and summer in the eastern Ross Sea. The oceanic pelagic Paralepididae) with faunal diversity decreasing south assemblage (0–1,000 m) contained Electrona antarctica, from the Antarctic Polar Front to the continent (Ever- Gymnoscopelus opisthopterus, Bathylagus antarcticus, son 1984; Kock 1992; Kellermann 1996). South of the Cyclothone kobayashii and Notolepis coatsi. These were Polar Front, the majority of meso- and bathypelagic replaced over the shelf by notothenioids, primarily Ple- fishes have circum-Antarctic distributions (McGinnis uragramma antarcticum. Pelagic biomass was low and 1982; Gon and Heemstra 1990). Taken collectively, the concentrated below 500 m. The demersal assemblage fishes are significant contributors to the pelagic biomass was characteristic of East Antarctica and included seven and are important trophic elements, both as predators species each of Artedidraconidae, Bathydraconidae and and prey (Rowedder 1979; Hopkins and Torres 1989; Channichthyidae, ten species of Nototheniidae, and Lancraft et al. 1989, 1991; Duhamel 1998). Over the three species each of Rajidae and Zoarcidae. Common continental slope and shelf, notothenioids dominate the species were Trematomus eulepidotus (36.5%), T. scotti ichthyofauna (DeWitt 1970). Most members of this (32.0%), Prionodraco evansii (4.9%), T. -
Flow Cytometric Investigation of the Size Spectrum of North Sea Phytoplankton Communities
FLOW CYTOMETRIC INVESTIGATION OF THE SIZE SPECTRUM OF NORTH SEA PHYTOPLANKTON COMMUNITIES Katy R. Owen A thesis submitted to the School of Environmental Sciences, at the University of East Anglia, for the degree of Doctor of Philosophy, May 2014. © This copy of the thesis has been supplied on condition that anyone who consults it is understood to recognise that its copyright rests with the author and that use of any information derived there from must be in accordance with current UK Copyright Law. In addition, any quotation or extract must include full attribution. 2 ABSTRACT Marine biogeochemical processes are closely linked to phytoplankton community assemblages. Cell abundance and biomass are a measure of the successful conversion of inorganic to organic carbon. Carbon estimates are therefore often used to analyse metabolism and energy transfers within marine environments, and carbon is frequently the main parameter used in ecosystem models. Phytoplankton can be divided into functional types based on cell size: microplankton (<200 µm), nanoplankton (2-20 µm) and picoplankton (≤ 3 µm). Differences in cell volume govern variations in carbon content, nutrient uptake and influence cell fate. Reduced diameters equate to lower sedimentation rates and promote participation within the microbial loop and recycling of carbon within surface waters. Larger diameters can increase settling rates, resulting in the loss of carbon from surface waters. Current North Sea monitoring and research programmes typically only consider larger micro- and nanoplankton cells, or the bulk phytoplankton community as a whole: there is little separation by functional type. Inclusion of picoplankton and the delineation of biomass contribution by cell size are required for accurate depictions of phytoplankton productivity within this region, but this is not feasible with current water sampling protocols. -
Fatty Acid and Alcohol Composition of the Small Polar Copepods, Oithona and Oncaea : Indication on Feeding Modes
Polar Biol (2003) 26: 666–671 DOI 10.1007/s00300-003-0540-x ORIGINAL PAPER G. Kattner Æ C. Albers Æ M. Graeve S. B. Schnack-Schiel Fatty acid and alcohol composition of the small polar copepods, Oithona and Oncaea : indication on feeding modes Received: 2 April 2003 / Accepted: 28 July 2003 / Published online: 27 August 2003 Ó Springer-Verlag 2003 Abstract The fatty acid and alcohol compositions of the (Paffenho¨ fer 1993). They occur from the polar seas to Antarctic copepods Oithona similis, Oncaea curvata, tropical regions at both hemispheres. Species of both Oncaea antarctica and the Arctic Oncaea borealis were genera can reach high concentrations, exceeding 5,000 determined to provide the first data on their lipid bio- individuals m)3 (Dagg et al. 1980; Koga 1986; chemistry and to expand the present knowledge on their Paffenho¨ fer 1993; Metz 1996). The high abundance of feeding modes and life-cycle strategies. All these tiny these tiny species compensates for the low biomass and, species contained high amounts of wax esters (on average thus, the populations can reach biomass levels of the 51.4–86.3% of total lipid), except females of Oithona same order as dominant calanoid species (Metz 1996). In similis (15.2%). The fatty-acid composition was clearly the Southern Ocean, Oithonidae and Oncaeidae can dominated by 18:1(n-9), especially in the wax-ester-rich account for between 20 and 24% of the total copepod Oncaea curvata (79.7% of total fatty acids). In all species, biomass (Schnack-Schiel et al. 1998). 16:0 and the polyunsaturated fatty acids 20:5(n-3) and The epipelagic species, Oithona similis, has been de- 22:6(n-3), which are structural components of all mem- scribed as the most numerous and widely distributed branes, occurred in significant proportions. -
Is Chloroplastic Class IIA Aldolase a Marine Enzyme&Quest;
The ISME Journal (2016) 10, 2767–2772 © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej SHORT COMMUNICATION Is chloroplastic class IIA aldolase a marine enzyme? Hitoshi Miyasaka1, Takeru Ogata1, Satoshi Tanaka2, Takeshi Ohama3, Sanae Kano4, Fujiwara Kazuhiro4,7, Shuhei Hayashi1, Shinjiro Yamamoto1, Hiro Takahashi5, Hideyuki Matsuura6 and Kazumasa Hirata6 1Department of Applied Life Science, Sojo University, Kumamoto, Japan; 2The Kansai Electric Power Co., Environmental Research Center, Keihanna-Plaza, Kyoto, Japan; 3School of Environmental Science and Engineering, Kochi University of Technology, Kochi, Japan; 4Chugai Technos Corporation, Hiroshima, Japan; 5Graduate School of Horticulture, Faculty of Horticulture, Chiba University, Chiba, Japan and 6Environmental Biotechnology Laboratory, Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan Expressed sequence tag analyses revealed that two marine Chlorophyceae green algae, Chlamydo- monas sp. W80 and Chlamydomonas sp. HS5, contain genes coding for chloroplastic class IIA aldolase (fructose-1, 6-bisphosphate aldolase: FBA). These genes show robust monophyly with those of the marine Prasinophyceae algae genera Micromonas, Ostreococcus and Bathycoccus, indicating that the acquisition of this gene through horizontal gene transfer by an ancestor of the green algal lineage occurred prior to the divergence of the core chlorophytes (Chlorophyceae and Treboux- iophyceae) and the prasinophytes. The absence of this gene in some freshwater chlorophytes, such as Chlamydomonas reinhardtii, Volvox carteri, Chlorella vulgaris, Chlorella variabilis and Coccomyxa subellipsoidea, can therefore be explained by the loss of this gene somewhere in the evolutionary process. Our survey on the distribution of this gene in genomic and transcriptome databases suggests that this gene occurs almost exclusively in marine algae, with a few exceptions, and as such, we propose that chloroplastic class IIA FBA is a marine environment-adapted enzyme. -
Evidence for Survival of Pleistocene Climatic Changes in Northern Refugia by the Land Snail Trochoidea Geyeri
Brigham Young University BYU ScholarsArchive Faculty Publications 2003-04-29 Evidence for survival of Pleistocene climatic changes in Northern refugia by the land snail Trochoidea geyeri David Posada Markus Pfenninger Frederic Magnin Follow this and additional works at: https://scholarsarchive.byu.edu/facpub Part of the Biology Commons BYU ScholarsArchive Citation Posada, David; Pfenninger, Markus; and Magnin, Frederic, "Evidence for survival of Pleistocene climatic changes in Northern refugia by the land snail Trochoidea geyeri" (2003). Faculty Publications. 501. https://scholarsarchive.byu.edu/facpub/501 This Peer-Reviewed Article is brought to you for free and open access by BYU ScholarsArchive. It has been accepted for inclusion in Faculty Publications by an authorized administrator of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. BMC Evolutionary Biology BioMed Central Research article Open Access Evidence for survival of Pleistocene climatic changes in Northern refugia by the land snail Trochoidea geyeri (Soós 1926) (Helicellinae, Stylommatophora) Markus Pfenninger*1,3, David Posada2 and Frédéric Magnin1 Address: 1IMEP URA-CNRS 1152 Case 451, Faculté des Sciences et Techniques de St. Jerome, F-13997 Marseille Cedex 20, France, 2Department of Zoology, Brigham Young University, 574 WIDB, Provo, UT 84602-5255, USA and 3Abteilung Ökologie und Evolution, Zoologisches Institut der J.W.Goethe-Universität, Bio-Campus Siesmayerstrae, D-60054 Frankfurt/Main, Germany Email: Markus Pfenninger* - [email protected]; David Posada - [email protected]; Frédéric Magnin - [email protected] * Corresponding author Published: 29 April 2003 Received: 10 March 2003 Accepted: 29 April 2003 BMC Evolutionary Biology 2003, 3:8 This article is available from: http://www.biomedcentral.com/1471-2148/3/8 © 2003 Pfenninger et al; licensee BioMed Central Ltd. -
Publications Supported by NOAA's Office of Ocean Exploration And
1 Publications Supported by NOAA’s Office of Ocean Exploration and Research Compiled by Chris Belter, NOAA Central Library Accurate as of 17 April 2012 Journal Articles (n=454) Ahyong ST. 2008. Deepwater crabs from seamounts and chemosynthetic habitats off eastern New Zealand (Crustacea : Decapoda : Brachyura). Zootaxa(1708):1-72. Aig D, Haywood K. 2008. Through the Sea Snow: The Central Role of Videography in the Deep Gulf Wrecks Mission. International Journal of Historical Archaeology 12(2):133-145. doi:10.1007/s10761-008-0049-7 Andrews AH, Stone RP, Lundstrom CC, DeVogelaere AP. 2009. Growth rate and age determination of bamboo corals from the northeastern Pacific Ocean using refined Pb-210 dating. Marine Ecology-Progress Series 397:173-185. doi:10.3354/meps08193 Angel MV. 2010. Towards a full inventory of planktonic Ostracoda (Crustacea) for the subtropical Northwestern Atlantic Ocean. Deep-Sea Research Part Ii-Topical Studies in Oceanography 57(24-26):2173-2188. doi:10.1016/j.dsr2.2010.09.020 Arellano SM, Young CM. 2009. Spawning, Development, and the Duration of Larval Life in a Deep-Sea Cold-Seep Mussel. Biological Bulletin 216(2):149-162. Auster PJ. 2007. Linking deep-water corals and fish populations. Bulletin of Marine Science 81:93-99. Auster PJ, Gjerde K, Heupel E, Watling L, Grehan A, Rogers AD. 2011. Definition and detection of vulnerable marine ecosystems on the high seas: problems with the "move-on" rule. ICES Journal of Marine Science 68(2):254-264. doi:10.1093/icesjms/fsq074 Auster PJ, Watling L. 2010. Beaked whale foraging areas inferred by gouges in the seafloor. -
Effects of Salinity on Diel Vertical Migration Behavior in Two Red-Tide Algae, Chattonella Antiqua and Karenia Mikimotoi
Plankton Benthos Res 9(1): 42–50, 2014 Plankton & Benthos Research © The Plankton Society of Japan Effects of salinity on diel vertical migration behavior in two red-tide algae, Chattonella antiqua and Karenia mikimotoi 1, 1 1 2 TOMOYUKI SHIKATA *, SETSUKO SAKAMOTO , GOH ONITSUKA , KAZUHIRO AOKI & 1 MINEO YAMAGUICHI 1 National Research Institute of Fisheries and Environment of Inland Sea, Fisheries Research Agency, Maruishi 2–17–5, Hatsukaichi, Hiroshima 739–0452, Japan. 2 National Research Institute of Fisheries Science, Fisheries Research Agency, 2–12–4 Fukuura, Kanazawa, Yokohama, Kanagawa 236–8648, Japan. Received 17 May 2013; Accepted 4 December 2013 Abstract: We examined the effects of salinity on diel vertical migration (DVM) of two coastal flagellates, Chattonella antiqua and Karenia mikimotoi, in 90-cm-high columnar aquariums. Experiments were performed with surface sa- linities from 5 to 32 and bottom salinity constant at 32. Cells of each flagellate were injected into the bottom of the aquarium at night and the vertical distribution of cells was monitored every 4 h for 36 h in one series of experiments, or twice daily (day and night) for 5 days in another. Ascent and descent started at approximately the same time in all water columns, indicating that difference in surface salinity does not substantially affect DVM rhythm in the two flagellates. During daytime, C. antiqua and K. mikimotoi transited haloclines with surface salinities ≥15 and accumu- lated at the surface, although K. mikimotoi required 2 days to transit the halocline with surface salinity of 20 and 4 days for surface salinity of 15. However, neither flagellate could transit haloclines with surface salinities of 5 or 10; instead they accumulated in the halocline during daytime. -
Biological Interactions Between Fish and Jellyfish in the Northwestern Mediterranean
Biological interactions between fish and jellyfish in the northwestern Mediterranean Uxue Tilves Barcelona 2018 Biological interactions between fish and jellyfish in the northwestern Mediterranean Interacciones biológicas entre meduas y peces y sus implicaciones ecológicas en el Mediterráneo Noroccidental Uxue Tilves Matheu Memoria presentada para optar al grado de Doctor por la Universitat Politècnica de Catalunya (UPC), Programa de doctorado en Ciencias del Mar (RD 99/2011). Tesis realizada en el Institut de Ciències del Mar (CSIC). Directora: Dra. Ana Maria Sabatés Freijó (ICM-CSIC) Co-directora: Dra. Verónica Lorena Fuentes (ICM-CSIC) Tutor/Ponente: Dr. Manuel Espino Infantes (UPC) Barcelona This student has been supported by a pre-doctoral fellowship of the FPI program (Spanish Ministry of Economy and Competitiveness). The research carried out in the present study has been developed in the frame of the FISHJELLY project, CTM2010-18874 and CTM2015- 68543-R. Cover design by Laura López. Visual design by Eduardo Gil. Thesis contents THESIS CONTENTS Summary 9 General Introduction 11 Objectives and thesis outline 30 Digestion times and predation potentials of Pelagia noctiluca eating CHAPTER1 fish larvae and copepods in the NW Mediterranean Sea 33 Natural diet and predation impacts of Pelagia noctiluca on fish CHAPTER2 eggs and larvae in the NW Mediterranean 57 Trophic interactions of the jellyfish Pelagia noctiluca in the NW Mediterranean: evidence from stable isotope signatures and fatty CHAPTER3 acid composition 79 Associations between fish and jellyfish in the NW CHAPTER4 Mediterranean 105 General Discussion 131 General Conclusion 141 Acknowledgements 145 Appendices 149 Summary 9 SUMMARY Jellyfish are important components of marine ecosystems, being a key link between lower and higher trophic levels. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
CINCINNATIAN GASTROPOD PRIMER by Ron Fine HOW DO SCIENTISTS CLASSIFY GASTROPODS?
CINCINNATIAN GASTROPOD PRIMER By Ron Fine HOW DO SCIENTISTS CLASSIFY GASTROPODS? KINGDOM: Animalia (Animals) Mammals Birds Fish Amphibians Molluscs Insects PHYLUM: Mollusca (Molluscs) Cephalopods Gastropods Bivalves Monoplacophorans Scaphopods Aplacophorans Polyplacophorans CLASS: Gastropoda (Gastropods or Snails) Gastropods 2 HOW MANY KINDS OF GASTROPODS ARE THERE? There are 611 Families of gastropods, but 202 are now extinct Whelk Slug Limpet Land Snail Conch Periwinkle Cowrie Sea Butterfly Nudibranch Oyster Borer 3 THERE ARE 60,000 TO 80,000 SPECIES! IN ENDLESS SHAPES AND PATTERNS! 4 HABITAT-WHERE DO GASTROPODS LIVE? Gardens Deserts Ocean Depths Mountains Ditches Rivers Lakes Estuaries Mud Flats Tropical Rain Forests Rocky Intertidal Woodlands Subtidal Zones Hydrothermal Vents Sub-Arctic/Antarctic Zones 5 HABITAT-WHAT WAS IT LIKE IN THE ORDOVICIAN? Gastropods in the Ordovician of Cincinnati lived in a tropical ocean, much like the Caribbean of today 6 DIET-WHAT DO GASTROPODS EAT? Herbivores Detritus Parasites Plant Eaters Mud Eaters Living on other animals Scavengers Ciliary Carnivores Eat dead animals Filter feeding in the water Meat Eaters 7 ANATOMY-HOW DO YOU IDENTIFY A GASTROPOD? Gastropod is Greek, from “gaster” meaning ‘stomach’ and “poda” meaning ‘foot’ They are characterized by a head with antennae, a large foot, coiled shell, a radula and operculum Torsion: all of a gastropod’s anatomy is twisted, not just the shell They are the largest group of molluscs, only insects are more diverse Most are hermaphrodites 8 GASTROPOD ANATOMY-FOOT Gastropods have a large “foot”, used for locomotion. Undulating bands of muscles propel the gastropod forward, even on vertical surfaces. SLIME! Gastropods excrete slime to help their foot glide over almost any surface.