Lead Inhibits Secretion of Osteonectin/SPARC Without Significantly Altering Collagen Or Hsp47 Production in Osteoblast-Like ROS 17/2.8 Cells

Total Page:16

File Type:pdf, Size:1020Kb

Lead Inhibits Secretion of Osteonectin/SPARC Without Significantly Altering Collagen Or Hsp47 Production in Osteoblast-Like ROS 17/2.8 Cells TOXICOLOGY AND APPLIED PHARMACOLOGY 116,240-247 ( 1992) Lead Inhibits Secretion of Osteonectin/SPARC without Significantly Altering Collagen or Hsp47 Production in Osteoblast-like ROS 17/2.8 Cells JOHN J. SAUK,* TIMOTHY SMITH,* ELLEN K. SILBERGELQt BRUCE A. FOWL&t AND MARTHA J. SOMERMAN# *Department ofPathology, University of Maryland Dental School. Baltimore, Maryland 21201; t Toxicology Program, Department of Pathology, University of Maryland School of Medicine, Baltimore, Maryland; and *Department of Periodontics, Prevention and Geriatrics, University of Michigan School of Dentistry, Ann Arbor, Michigan Received February 28, 1992; accepted June 8, 1992 Richter et al., 1968; Choie et al., 1975; McLachlin et al., Lead Inhibits Secretion of Osteonectin/SPARC without Sig- 1980; Shelton and Egle, 1982), two glucose regulated proteins nificantly Altering Collagen or Hsp47 Production in Osteoblast- (Shelton et al., 1986) and by deminishing the levels of the like ROS 17/2.8 Cells. SAUK, J. J., SMITH, T., SILBERGELD, bone related protein, osteocalcin (Angle et al., 1990; Long E.K.,FowLER,B. A.,AND SOMERMAN,M.J. (1992). Toxicol. Appl. Pharmacol. 116,240-247. et al., 1989, 1990). In addition to osteocalcin, there is increasing evidence In an effort to better understand the consequences of lead that other noncollagenous proteins associated with miner- (Pb’+) on skeletal growth, the effects of Pb*+ were investigated alized tissues play a critical role in the regulation of osteo- using ROS 17/2.8 bone-like cells in vitro. These studies revealed genesis. This has led to increased research emphasis on pu- that Pb2+ (4.5 X 10m6 M - 4.5 X 10M7 M) has little or no effect on cell shape except when added immediately following seeding rifying, characterizing, and identifying the role of these pro- of the cells. However, proliferation of ROS cells was inhibited, teins in the mineralization process (for reviews see Butler in the absence of serum, at concentrations of 4.5 X 10m6M Pb*+. 1985; Fisher et al.. 1987; Glimcher and Lian, 1989). Many Protein production was generally increased, however, the major of these proteins are acidic and are known to bind both Ca2+ structural protein of bone, type I collagen, production was only and hydroxylapatite, suggesting a role for them in the initial slightly altered. Following treatment of ROS cells with Pb*+, phases of mineralization. Also, some bone related proteins intracellular levels of the calcium-binding protein osteonectin/ such as osteonectin/SPARC (secreted protein, acid and rich SPARC were increased. Osteonectin/SPARC secretion into the in cysteine) mRNA have been localized to areas of active media was delayed or inhibited. Coincident with retention of tissue morphogenesis and are expressed in cells and tissues osteonectin/SPARC there was a decrease in the levels of osteo- that exhibit high rates of turnover, secretion, and remodeling nectin/SPARC mRNA as determined by Northern analysis. (Funk and Sage, 199 1). In the studies reported here we seek These studies suggest that processes associated with osteonectin/ to determine if Pb2+ alters the characteristics of ROS 17/2.8 SPARC translation and secretion are sensitive to Pb2+. o 1992 bone-like cells in vitro. Also, this study determines whether Academic Press, Inc. Pb2+ affects the production of two recognized bone matrix components, collagen and osteonectin/SPARC. Further- Lead (Pb”) is a toxic substance that is known to impair more, we examine the effect of Pb2+ on Hsp47, a resident skeletal growth even at levels of exposure for the general endoplasmic reticulum protein of cells producing type I col- population (0.75 PM) (Mooty et al., 1975; Angle and Huse- lagen (Nakai et al., 1990; Sauk et al., 1990b). man, 1989; Shukla et al., 1989; Schwartz et al., 1986; Fri- sanch and Ryan, 1991). There are several indications that MATERIALS AND METHODS Pb2+ by its interactions with calcium (Ca2+) may perturb Cell culture. Cloned bone cell lines (ROS 17/2.8) derived from AC19935 many normal calcium regulatory processes, e.g., its action rat osteosarcoma were used. These cells have the advantage that their os- as a second messenger, interactions with calcium binding teoblastic-like phenotypic characteristics are maintained in vitro (Majeska and other extracellular proteins associated with mineralized et al.. 1980). Cells were cultured in Dulbecco’s modified Eagle’s medium tissues and subcellular functions at the level of the mito- (DMEM) supplemented with 1.16 g/l glutamine, 100 units/ml penicillin, 100 &ml streptomycin, and 10% fetal bovine serum (FBS). Lead glutamate chondria, synaptosomes, and membrane vesicles. Further- was prepared by preparing a stock solution containing 4.5 X lo-’ M lead more, lead is known to affect protein synthesis (Shelton et nitrate (Sigma) and 5.0 X lo-’ M glutamic acid in water. al., 1986), particularly by increasing proteins that constitute Proliferation rate. To evaluate the effects of lead on cell proliferation, nuclear and cytoplasmic inclusion bodies (Moore et al., 1973; ROS 17/2.8 cells were seeded into tissue culture wells (35 mm Falcon), 0041-008X/92 $5.00 240 Copyright 0 1992 by Academic Press, Inc. All rights of reproduction in any form reserved. LEAD INHIBITS SECRETION OF OSTEONECTIN/SPARC 241 ~8.0 X lo3 cells/well. with DMEM supplemented with 10% FBS and an- (Kirkegaard & Perry Labs, Inc., Gaithersburg, MD) was diluted to 0.9 pg/ tibiotic and incubated overnight at 37°C. On the following day, the medium ml and incubated with the paper for 2 hr. Washing between steps was per- was removed from each well and medium added as follows: (a) DMEM + formed three times for 30 min with 50 mM Tris-HCl, 0.9 M NaCI, 0.05% 10% FBS + glutamic acid; (b) DMEM + 2% FBS + glutamic acid; (c) DMEM Tween, pH 7.4. Staining was accomplished with 4-chloro-naphthol. For + 0% FBS + ghrtamic acid; (d) DMEM + 2% FBS t lead glutamate; and Hsp47, polyclonal rabbit antibodies were prepared against a 22-mer peptide (e) DMEM t 0% FBS + lead glutamate. The effects of lead glutamate on corresponding to the N-terminal sequence of chick Hsp47 (Hirayoshi et al.. cell proliferation were evaluated at three different concentrations, 4.5 X lo-’ 199 1) that was conjugated to Keyhole limpit hemocyanin (Sauk et al., 1990b). M, 4.5 X 10m6M and 4.5 X lo-’ M. Cell proliferation, on Day 2, Day 4. and Zmmunoprecipitation. Cell layers having equal cell numbers were ho- Day 6 after seeding, was determined by trypsinizing cells and counting elec- mogenized in 2X immunoprecipitation buffer (0.2 M Tris-HCI, 0.3 M NaCl., tronically using a Coulter counter. 2% Triton X-100, 2% deoxycholate, 0.2% SDS, pH 7.2) and diluted with Determination of total protein and collagen production. The methods cold distilled water to 1 X. while the culture media was diluted 3: 1 with 4X for labeling cells have been reported previously (Somerman et al.. 1987). immunoprecipitation buffer. The homogenates and media were then cen- Briefly, 1.0 X lo4 cells per test well (Falcon, 35-mm wells) were seeded in trifuged for 5 min at 10,OOOgin an Eppendorfcentrifuge and a 50-r] sample wells in DMEM with 10% FBS and antibiotics. After cells attached and of the radiolabeled supernatant was added to a mixture of GammaBind G- spread, medium was removed and cells were incubated for 48 hr in serum- Agarose (Genex, Gaithersburg, MD) and antibody in PBS-azide. The samples free DMEM with 20 &i/ml L-5-[3H]proline and (a) glutamic acid (control) were then incubated at 4°C with constant shaking and then centrifuged at or(b) 4.5 X 1O-6 M lead glutamate. Media and cell samples were then dialyzed 10,OOOg for 10 min. The resulting immunoprecipitate pellets were then extensively against cold buffer (pH 7.4,0.05 M Tris-HCI, 0.2 M NaCI, 0.005 washed twice with PBS-azide. The final pellets were suspended in 2X gel M CaCl,). Following dialysis, aliquots of these samples were counted in a electrophoresis sample buffer, heated for IO min at 90°C. and then centrifuged liquid scintillation spectrometer (Packard Tri Carb 460C) in Aquasol- (New to remove GammaBind G-agarose. Samples ofthe supematants were counted England Nuclear (NEN) Boston. MA). These counts represented total non- in a scintillation counter and another sample analyzed by PAGE and au- dialyzable radioactive material and were taken as a measure of total protein toradiography as described above. Autoradiograms were densitometrically production. scanned and data were reported as ratio of treated to control samples. To estimate collagen production, an ahquot of the above dialyzed material Northern analysis. Total RNA from 4 X lo6 ROS 17/2.8 cells was sol- was reacted for 6 hr at 37°C with chromatographicahy purified bacterial ubilized in 500 ~14 M guanidinium thiocyanate containing 25 mM sodium collagenase (Form III, Advance Biofactures) according to methods of Pe- acetate (pH 5.0) and 100 IIIM fl-mercaptoethanol, transferred to an Eppendorf terkofsky and Diegelmann ( 197 1). Undigested proteins were precipitated tube containing 20-pg of calf liver tRNA, and precipitated by addition of with 5% trichloroacetic acid/0.5% tannic acid and samples were centrifuged. 450 r.d of 100% ethanol. RNA pellets were reprecipitated in the presence of An aliquot of the supernatant was counted in Aquasol- (NEN) with a liquid 80% ethanol containing 100 mM sodium acetate (pH 5.0) at -20°C. and scintillation counter. To provide a background value for the collagenase equal amounts of RNA were immediately loaded onto Northerns. RNA assays, additional aliquots of dialyzate were treated as above except that was transferred to nitrocellulose and bound to the paper by baking at 80°C bacterial collagenase was excluded from these samples.
Recommended publications
  • The Rise and Fall of the Bovine Corpus Luteum
    University of Nebraska Medical Center DigitalCommons@UNMC Theses & Dissertations Graduate Studies Spring 5-6-2017 The Rise and Fall of the Bovine Corpus Luteum Heather Talbott University of Nebraska Medical Center Follow this and additional works at: https://digitalcommons.unmc.edu/etd Part of the Biochemistry Commons, Molecular Biology Commons, and the Obstetrics and Gynecology Commons Recommended Citation Talbott, Heather, "The Rise and Fall of the Bovine Corpus Luteum" (2017). Theses & Dissertations. 207. https://digitalcommons.unmc.edu/etd/207 This Dissertation is brought to you for free and open access by the Graduate Studies at DigitalCommons@UNMC. It has been accepted for inclusion in Theses & Dissertations by an authorized administrator of DigitalCommons@UNMC. For more information, please contact [email protected]. THE RISE AND FALL OF THE BOVINE CORPUS LUTEUM by Heather Talbott A DISSERTATION Presented to the Faculty of the University of Nebraska Graduate College in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Biochemistry and Molecular Biology Graduate Program Under the Supervision of Professor John S. Davis University of Nebraska Medical Center Omaha, Nebraska May, 2017 Supervisory Committee: Carol A. Casey, Ph.D. Andrea S. Cupp, Ph.D. Parmender P. Mehta, Ph.D. Justin L. Mott, Ph.D. i ACKNOWLEDGEMENTS This dissertation was supported by the Agriculture and Food Research Initiative from the USDA National Institute of Food and Agriculture (NIFA) Pre-doctoral award; University of Nebraska Medical Center Graduate Student Assistantship; University of Nebraska Medical Center Exceptional Incoming Graduate Student Award; the VA Nebraska-Western Iowa Health Care System Department of Veterans Affairs; and The Olson Center for Women’s Health, Department of Obstetrics and Gynecology, Nebraska Medical Center.
    [Show full text]
  • Functions of Osteocalcin in Bone, Pancreas, Testis, and Muscle
    International Journal of Molecular Sciences Review Functions of Osteocalcin in Bone, Pancreas, Testis, and Muscle Toshihisa Komori Basic and Translational Research Center for Hard Tissue Disease, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki 852-8588, Japan; [email protected]; Tel.: +81-95-819-7637; Fax: +81-95-819-7638 Received: 17 September 2020; Accepted: 10 October 2020; Published: 12 October 2020 Abstract: Osteocalcin (Ocn), which is specifically produced by osteoblasts, and is the most abundant non-collagenous protein in bone, was demonstrated to inhibit bone formation and function as a hormone, which regulates glucose metabolism in the pancreas, testosterone synthesis in the testis, / / and muscle mass, based on the phenotype of Ocn− − mice by Karsenty’s group. Recently, Ocn− − mice were newly generated by two groups independently. Bone strength is determined by bone / quantity and quality. The new Ocn− − mice revealed that Ocn is not involved in the regulation of bone formation and bone quantity, but that Ocn regulates bone quality by aligning biological apatite (BAp) parallel to the collagen fibrils. Moreover, glucose metabolism, testosterone synthesis and / spermatogenesis, and muscle mass were normal in the new Ocn− − mice. Thus, the function of Ocn is the adjustment of growth orientation of BAp parallel to the collagen fibrils, which is important for bone strength to the loading direction of the long bone. However, Ocn does not play a role as a hormone in the pancreas, testis, and muscle. Clinically, serum Ocn is a marker for bone formation, and exercise increases bone formation and improves glucose metabolism, making a connection between Ocn and glucose metabolism.
    [Show full text]
  • Supplemental Table 3 - Male Genes Differentially Expressed > 1.5-Fold Among Strains in E11.5 XY Gonads
    Supplemental Table 3 - Male genes differentially expressed > 1.5-fold among strains in E11.5 XY gonads. Male genes differentially expressed between C57BL/6J and 129S1/SvImJ. Note: Positive fold values reflect male genes that are up regulated in C57BL/6J relative to 129S1/SvImJ. Fold Diff Gene symbol Genbank acc Description 10.77 Gcnt1 NM_173442 Mus musculus glucosaminyl (N-acetyl) transferase 1, core 2 (Gcnt1), mRNA [NM_173442] 5.50 Afp NM_007423 Mus musculus alpha fetoprotein (Afp), mRNA [NM_007423] 4.95 Hnf4a NM_008261 Mus musculus hepatic nuclear factor 4, alpha (Hnf4a), mRNA [NM_008261] 4.71 Ppp1r14c AK082372 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230042N14 product:hypothetical protein, full insert sequence. [AK082372] 4.41 Gorasp2 AK020521 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430094F20 product:inferred: golgi reassembly stacking protein 2, full insert sequence. [AK020521] 3.69 Tmc7 NM_172476 Mus musculus transmembrane channel-like gene family 7 (Tmc7), mRNA [NM_172476] 2.97 Mt2 NM_008630 Mus musculus metallothionein 2 (Mt2), mRNA [NM_008630] 2.62 Gstm6 NM_008184 Mus musculus glutathione S-transferase, mu 6 (Gstm6), mRNA [NM_008184] 2.43 Adhfe1 NM_175236 Mus musculus alcohol dehydrogenase, iron containing, 1 (Adhfe1), mRNA [NM_175236] 2.38 Txndc2 NM_153519 Mus musculus thioredoxin domain containing 2 (spermatozoa) (Txndc2), mRNA [NM_153519] 2.30 C030038J10Rik AK173336 Mus musculus mRNA for mKIAA2027
    [Show full text]
  • A Selective ER-Phagy Exerts Procollagen Quality Control Via a Calnexin-FAM134B Complex
    Article A selective ER-phagy exerts procollagen quality control via a Calnexin-FAM134B complex Alison Forrester1,†, Chiara De Leonibus1,†, Paolo Grumati2,†, Elisa Fasana3,†, Marilina Piemontese1, Leopoldo Staiano1, Ilaria Fregno3,4, Andrea Raimondi5, Alessandro Marazza3,6, Gemma Bruno1, Maria Iavazzo1, Daniela Intartaglia1, Marta Seczynska2, Eelco van Anken7, Ivan Conte1, Maria Antonietta De Matteis1,8, Ivan Dikic2,9,* , Maurizio Molinari3,10,** & Carmine Settembre1,11,*** Abstract The EMBO Journal (2019) 38:e99847 Autophagy is a cytosolic quality control process that recognizes substrates through receptor-mediated mechanisms. Procollagens, Introduction the most abundant gene products in Metazoa, are synthesized in the endoplasmic reticulum (ER), and a fraction that fails to attain Macroautophagy (hereafter referred to as autophagy) is a homeostatic the native structure is cleared by autophagy. However, how auto- catabolic process devoted to the sequestration of cytoplasmic material phagy selectively recognizes misfolded procollagens in the ER in double-membrane vesicles (autophagic vesicles, AVs) that eventu- lumen is still unknown. We performed siRNA interference, CRISPR- ally fuse with lysosomes where cargo is degraded (Mizushima, 2011). Cas9 or knockout-mediated gene deletion of candidate autophagy Autophagy is essential to maintain tissue homeostasis and counter- and ER proteins in collagen producing cells. We found that the ER- acts both the onset and progression of many disease conditions, such resident lectin chaperone Calnexin (CANX) and the ER-phagy as ageing, neurodegeneration and cancer (Levine et al, 2015). receptor FAM134B are required for autophagy-mediated quality Substrates can be selectively delivered to AVs through receptor- control of endogenous procollagens. Mechanistically, CANX acts as mediated processes. Autophagy receptors harbour a LC3 or GABARAP co-receptor that recognizes ER luminal misfolded procollagens and interaction motif (LIR or GIM, respectively) that facilitate binding of interacts with the ER-phagy receptor FAM134B.
    [Show full text]
  • Detection of Pro Angiogenic and Inflammatory Biomarkers in Patients With
    www.nature.com/scientificreports OPEN Detection of pro angiogenic and infammatory biomarkers in patients with CKD Diana Jalal1,2,3*, Bridget Sanford4, Brandon Renner5, Patrick Ten Eyck6, Jennifer Laskowski5, James Cooper5, Mingyao Sun1, Yousef Zakharia7, Douglas Spitz7,9, Ayotunde Dokun8, Massimo Attanasio1, Kenneth Jones10 & Joshua M. Thurman5 Cardiovascular disease (CVD) is the most common cause of death in patients with native and post-transplant chronic kidney disease (CKD). To identify new biomarkers of vascular injury and infammation, we analyzed the proteome of plasma and circulating extracellular vesicles (EVs) in native and post-transplant CKD patients utilizing an aptamer-based assay. Proteins of angiogenesis were signifcantly higher in native and post-transplant CKD patients versus healthy controls. Ingenuity pathway analysis (IPA) indicated Ephrin receptor signaling, serine biosynthesis, and transforming growth factor-β as the top pathways activated in both CKD groups. Pro-infammatory proteins were signifcantly higher only in the EVs of native CKD patients. IPA indicated acute phase response signaling, insulin-like growth factor-1, tumor necrosis factor-α, and interleukin-6 pathway activation. These data indicate that pathways of angiogenesis and infammation are activated in CKD patients’ plasma and EVs, respectively. The pathways common in both native and post-transplant CKD may signal similar mechanisms of CVD. Approximately one in 10 individuals has chronic kidney disease (CKD) rendering CKD one of the most common diseases worldwide1. CKD is associated with a high burden of morbidity in the form of end stage kidney disease (ESKD) requiring dialysis or transplantation 2. Furthermore, patients with CKD are at signifcantly increased risk of death from cardiovascular disease (CVD)3,4.
    [Show full text]
  • Genetic, Cytogenetic and Physical Refinement of the Autosomal Recessive CMT Linked to 5Q31ð Q33: Exclusion of Candidate Genes I
    European Journal of Human Genetics (1999) 7, 849–859 © 1999 Stockton Press All rights reserved 1018–4813/99 $15.00 t http://www.stockton-press.co.uk/ejhg ARTICLE Genetic, cytogenetic and physical refinement of the autosomal recessive CMT linked to 5q31–q33: exclusion of candidate genes including EGR1 Ang`ele Guilbot1, Nicole Ravis´e1, Ahmed Bouhouche6, Philippe Coullin4, Nazha Birouk6, Thierry Maisonobe3, Thierry Kuntzer7, Christophe Vial8, Djamel Grid5, Alexis Brice1,2 and Eric LeGuern1,2 1INSERM U289, 2F´ed´eration de Neurologie and 3Laboratoire de Neuropathologie R Escourolle, Hˆopital de la Salpˆetri`ere, Paris 4Laboratoire de cytog´en´etique, Villejuif 5G´en´ethon, Evry, France 6Service de Neurologie, Hˆopital des Sp´ecialit´es, Rabat, Morocco 7Service de Neurologie, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland 8Service D’EMG et de pathologie neuromusculaire, Hˆopital neurologique Pierre Wertheimer, Lyon, France Charcot-Marie-Tooth disease is an heterogeneous group of inherited peripheral motor and sensory neuropathies with several modes of inheritance: autosomal dominant, X-linked and autosomal recessive. By homozygosity mapping, we have identified, in the 5q23–q33 region, a third locus responsible for an autosomal recessive form of demyelinating CMT. Haplotype reconstruction and determination of the minimal region of homozygosity restricted the candidate region to a 4 cM interval. A physical map of the candidate region was established by screening YACs for microsatellites used for genetic analysis. Combined genetic, cytogenetic and physical mapping restricted the locus to a less than 2 Mb interval on chromosome 5q32. Seventeen consanguineous families with demyelinating ARCMT of various origins were screened for linkage to 5q31–q33.
    [Show full text]
  • Journal of Proteomics 151 (2017) 131–144
    Journal of Proteomics 151 (2017) 131–144 Contents lists available at ScienceDirect Journal of Proteomics journal homepage: www.elsevier.com/locate/jprot Profiling the proteomics in honeybee worker brains submitted to the proboscis extension reflex Anally Ribeiro da Silva Menegasso a,MarcelPratavieiraa, Juliana de Saldanha da Gama Fischer b, Paulo Costa Carvalho b, Thaisa Cristina Roat a, Osmar Malaspina a, Mario Sergio Palma a,⁎ a Center of the Study of Social Insects, Department of Biology, Institute of Biosciences of Rio Claro, São Paulo State University (UNESP), Rio Claro, SP 13500, Brazil b Laboratory for Proteomics and Protein Engineering, Carlos Chagas Institute, Fiocruz, Paraná, Brazil article info abstract Article history: The proboscis extension reflex (PER) is an unconditioned stimulus (US) widely used to access the ability of hon- Received 13 January 2016 eybees to correlate it with a conditioned stimulus (CS) during learning and memory acquisition. However, little is Received in revised form 20 May 2016 known about the biochemical/genetic changes in worker honeybee brains induced by the PER alone. The present Accepted 25 May 2016 investigation profiled the proteomic complement associated with the PER to further the understanding of the Available online 31 May 2016 major molecular transformations in the honeybee brain during the execution of a US. In the present study, a quantitative shotgun proteomic approach was employed to assign the proteomic complement of the honeybee Keywords: Neuroproteomics brain. The results were analyzed under the view of protein networking for different processes involved in PER be- Shotgun havior. In the brains of PER-stimulated individuals, the metabolism of cyclic/heterocyclic/aromatic compounds Label-free quantitation was activated in parallel with the metabolism of nitrogenated compounds, followed by the up-regulation of car- Honeybee bohydrate metabolism, the proteins involved with the anatomic and cytoskeleton; the down-regulation of the Memory anatomic development and cell differentiation in other neurons also occurred.
    [Show full text]
  • Methylome and Transcriptome Maps of Human Visceral and Subcutaneous
    www.nature.com/scientificreports OPEN Methylome and transcriptome maps of human visceral and subcutaneous adipocytes reveal Received: 9 April 2019 Accepted: 11 June 2019 key epigenetic diferences at Published: xx xx xxxx developmental genes Stephen T. Bradford1,2,3, Shalima S. Nair1,3, Aaron L. Statham1, Susan J. van Dijk2, Timothy J. Peters 1,3,4, Firoz Anwar 2, Hugh J. French 1, Julius Z. H. von Martels1, Brodie Sutclife2, Madhavi P. Maddugoda1, Michelle Peranec1, Hilal Varinli1,2,5, Rosanna Arnoldy1, Michael Buckley1,4, Jason P. Ross2, Elena Zotenko1,3, Jenny Z. Song1, Clare Stirzaker1,3, Denis C. Bauer2, Wenjia Qu1, Michael M. Swarbrick6, Helen L. Lutgers1,7, Reginald V. Lord8, Katherine Samaras9,10, Peter L. Molloy 2 & Susan J. Clark 1,3 Adipocytes support key metabolic and endocrine functions of adipose tissue. Lipid is stored in two major classes of depots, namely visceral adipose (VA) and subcutaneous adipose (SA) depots. Increased visceral adiposity is associated with adverse health outcomes, whereas the impact of SA tissue is relatively metabolically benign. The precise molecular features associated with the functional diferences between the adipose depots are still not well understood. Here, we characterised transcriptomes and methylomes of isolated adipocytes from matched SA and VA tissues of individuals with normal BMI to identify epigenetic diferences and their contribution to cell type and depot-specifc function. We found that DNA methylomes were notably distinct between diferent adipocyte depots and were associated with diferential gene expression within pathways fundamental to adipocyte function. Most striking diferential methylation was found at transcription factor and developmental genes. Our fndings highlight the importance of developmental origins in the function of diferent fat depots.
    [Show full text]
  • 2812 Matrix Vesicles: Structure, Composition, Formation and Function in Ca
    [Frontiers in Bioscience 16, 2812-2902, June 1, 2011] Matrix vesicles: structure, composition, formation and function in calcification Roy E. Wuthier Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208 TABLE OF CONTENTS 1. Abstract 2. Introduction 3. Morphology of matrix vesicles (MVs) 3.1. Conventional transmission electron microscopy 3.2. Cryofixation, freeze-substitution electron microscopy 3.3. Freeze-fracture studies 4. Isolation of MVs 4.1. Crude collagenase digestion methods 4.2. Non-collagenase dependent methods 4.3. Cell culture methods 4.4. Modified collagenase digestion methods 4.5. Other isolation methods 5. MV proteins 5.1. Early SDS-PAGE studies 5.2. Isolation and identification of major MV proteins 5.3. Sequential extraction, separation and characterization of major MV proteins 5.4. Proteomic characterization of MV proteins 6. MV-associated extracellular matrix proteins 6.1. Type VI collagen 6.2. Type X collagen 6.3. Proteoglycan link protein and aggrecan core protein 6.4. Fibrillin-1 and fibrillin-2 7. MV annexins – acidic phospholipid-dependent ca2+-binding proteins 7.1. Annexin A5 7.2. Annexin A6 7.3. Annexin A2 7.4. Annexin A1 7.5. Annexin A11 and Annexin A4 8. MV enzymes 8.1. Tissue-nonspecific alkaline phosphatase(TNAP) 8.1.1. Molecular structure 8.1.2. Amino acid sequence 8.1.3. 3-D structure 8.1.4. Disposition in the MV membrane 8.1.5. Catalytic properties 8.1.6. Collagen-binding properties 8.2. Nucleotide pyrophosphate phosphodiesterase (NPP1, PC1) 8.3. PHOSPHO-1 (Phosphoethanolamine/Phosphocholine phosphatase 8.4. Acid phosphatase 8.5.
    [Show full text]
  • Transcriptomic Landscape of Breast Cancers Through Mrna Sequencing Jeyanthy Eswaran George Washington University
    Himmelfarb Health Sciences Library, The George Washington University Health Sciences Research Commons Biochemistry and Molecular Medicine Faculty Biochemistry and Molecular Medicine Publications 2-14-2012 Transcriptomic landscape of breast cancers through mRNA sequencing Jeyanthy Eswaran George Washington University Dinesh Cyanam George Washington University Prakriti Mudvari George Washington University Sirigiri Divijendra Natha Reddy George Washington University Suresh Pakala George Washington University See next page for additional authors Follow this and additional works at: http://hsrc.himmelfarb.gwu.edu/smhs_biochem_facpubs Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Eswaran, J., Cyanam, D., Mudvari, P., Reddy, S., Pakala, S., Nair, S., Florea, L., & Fuqua, S. (2012). Transcriptomic landscape of breast cancers through mrna sequencing. Scientific Reports, 2, 264. This Journal Article is brought to you for free and open access by the Biochemistry and Molecular Medicine at Health Sciences Research Commons. It has been accepted for inclusion in Biochemistry and Molecular Medicine Faculty Publications by an authorized administrator of Health Sciences Research Commons. For more information, please contact [email protected]. Authors Jeyanthy Eswaran, Dinesh Cyanam, Prakriti Mudvari, Sirigiri Divijendra Natha Reddy, Suresh Pakala, Sujit S. Nair, Liliana Florea, Suzanne A.W. Fuqua, Sucheta Godbole, and Rakesh Kumar This journal article is available at Health Sciences Research Commons: http://hsrc.himmelfarb.gwu.edu/smhs_biochem_facpubs/3
    [Show full text]
  • Changes in the Cytosolic Proteome of Aedes Malpighian Tubules
    329 The Journal of Experimental Biology 212, 329-340 Published by The Company of Biologists 2009 doi:10.1242/jeb.024646 Research article Signaling to the apical membrane and to the paracellular pathway: changes in the cytosolic proteome of Aedes Malpighian tubules Klaus W. Beyenbach1,*, Sabine Baumgart2, Kenneth Lau1, Peter M. Piermarini1 and Sheng Zhang2 1Department of Biomedical Sciences, VRT 8004, Cornell University, Ithaca, NY 14853, USA and 2Proteomics and Mass Spectrometry Core Facility, 143 Biotechnology Building, Cornell University, Ithaca, NY 14853, USA *Author for correspondence (e-mail: [email protected]) Accepted 6 November 2008 Summary Using a proteomics approach, we examined the post-translational changes in cytosolic proteins when isolated Malpighian tubules of Aedes aegypti were stimulated for 1 min with the diuretic peptide aedeskinin-III (AK-III, 10–7 mol l–1). The cytosols of control (C) and aedeskinin-treated (T) tubules were extracted from several thousand Malpighian tubules, subjected to 2-D electrophoresis and stained for total proteins and phosphoproteins. The comparison of C and T gels was performed by gel image analysis for the change of normalized spot volumes. Spots with volumes equal to or exceeding C/T ratios of ±1.5 were robotically picked for in- gel digestion with trypsin and submitted for protein identification by nanoLC/MS/MS analysis. Identified proteins covered a wide range of biological activity. As kinin peptides are known to rapidly stimulate transepithelial secretion of electrolytes and water by Malpighian tubules, we focused on those proteins that might mediate the increase in transepithelial secretion. We found that AK- III reduces the cytosolic presence of subunits A and B of the V-type H+ ATPase, endoplasmin, calreticulin, annexin, type II regulatory subunit of protein kinase A (PKA) and rab GDP dissociation inhibitor and increases the cytosolic presence of adducin, actin, Ca2+-binding protein regucalcin/SMP30 and actin-depolymerizing factor.
    [Show full text]
  • Transcriptomic and Proteomic Profiling Provides Insight Into
    BASIC RESEARCH www.jasn.org Transcriptomic and Proteomic Profiling Provides Insight into Mesangial Cell Function in IgA Nephropathy † † ‡ Peidi Liu,* Emelie Lassén,* Viji Nair, Celine C. Berthier, Miyuki Suguro, Carina Sihlbom,§ † | † Matthias Kretzler, Christer Betsholtz, ¶ Börje Haraldsson,* Wenjun Ju, Kerstin Ebefors,* and Jenny Nyström* *Department of Physiology, Institute of Neuroscience and Physiology, §Proteomics Core Facility at University of Gothenburg, University of Gothenburg, Gothenburg, Sweden; †Division of Nephrology, Department of Internal Medicine and Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan; ‡Division of Molecular Medicine, Aichi Cancer Center Research Institute, Nagoya, Japan; |Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden; and ¶Integrated Cardio Metabolic Centre, Karolinska Institutet Novum, Huddinge, Sweden ABSTRACT IgA nephropathy (IgAN), the most common GN worldwide, is characterized by circulating galactose-deficient IgA (gd-IgA) that forms immune complexes. The immune complexes are deposited in the glomerular mesangium, leading to inflammation and loss of renal function, but the complete pathophysiology of the disease is not understood. Using an integrated global transcriptomic and proteomic profiling approach, we investigated the role of the mesangium in the onset and progression of IgAN. Global gene expression was investigated by microarray analysis of the glomerular compartment of renal biopsy specimens from patients with IgAN (n=19) and controls (n=22). Using curated glomerular cell type–specific genes from the published literature, we found differential expression of a much higher percentage of mesangial cell–positive standard genes than podocyte-positive standard genes in IgAN. Principal coordinate analysis of expression data revealed clear separation of patient and control samples on the basis of mesangial but not podocyte cell–positive standard genes.
    [Show full text]