0521641098.Pdf
Total Page:16
File Type:pdf, Size:1020Kb

Load more
Recommended publications
-
Chapter 1-1 Introduction
Glime, J. M. 2017. Introduction. Chapt. 1. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook sponsored 1-1-1 by Michigan Technological University and the International Association of Bryologists. Last updated 25 April 2021 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 1-1 INTRODUCTION TABLE OF CONTENTS Thinking on a New Scale .................................................................................................................................... 1-1-2 Adaptations to Land ............................................................................................................................................ 1-1-3 Minimum Size..................................................................................................................................................... 1-1-5 Do Bryophytes Lack Diversity?.......................................................................................................................... 1-1-6 The "Moss".......................................................................................................................................................... 1-1-7 What's in a Name?............................................................................................................................................... 1-1-8 Phyla/Divisions............................................................................................................................................ 1-1-8 Role of Bryology................................................................................................................................................ -
Fmicb-11-542372 September 28, 2020 Time: 18:7 # 1
UvA-DARE (Digital Academic Repository) Seasonal and Geographical Transitions in Eukaryotic Phytoplankton Community Structure in the Atlantic and Pacific Oceans Choi, C.J.; Jimenez, V.; Needham, D.M.; Poirier, C.; Bachy, C.; Alexander, H.; Wilken, S.; Chavez, F.P.; Sudek, S.; Giovannoni, S.J.; Worden, A.Z. DOI 10.3389/fmicb.2020.542372 Publication date 2020 Document Version Final published version Published in Frontiers in Microbiology License CC BY Link to publication Citation for published version (APA): Choi, C. J., Jimenez, V., Needham, D. M., Poirier, C., Bachy, C., Alexander, H., Wilken, S., Chavez, F. P., Sudek, S., Giovannoni, S. J., & Worden, A. Z. (2020). Seasonal and Geographical Transitions in Eukaryotic Phytoplankton Community Structure in the Atlantic and Pacific Oceans. Frontiers in Microbiology, 11, [542372]. https://doi.org/10.3389/fmicb.2020.542372 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. -
Systema Naturae∗
Systema Naturae∗ c Alexey B. Shipunov v. 5.802 (June 29, 2008) 7 Regnum Monera [ Bacillus ] /Bacteria Subregnum Bacteria [ 6:8Bacillus ]1 Superphylum Posibacteria [ 6:2Bacillus ] stat.m. Phylum 1. Firmicutes [ 6Bacillus ]2 Classis 1(1). Thermotogae [ 5Thermotoga ] i.s. 2(2). Mollicutes [ 5Mycoplasma ] 3(3). Clostridia [ 5Clostridium ]3 4(4). Bacilli [ 5Bacillus ] 5(5). Symbiobacteres [ 5Symbiobacterium ] Phylum 2. Actinobacteria [ 6Actynomyces ] Classis 1(6). Actinobacteres [ 5Actinomyces ] Phylum 3. Hadobacteria [ 6Deinococcus ] sed.m. Classis 1(7). Hadobacteres [ 5Deinococcus ]4 Superphylum Negibacteria [ 6:2Rhodospirillum ] stat.m. Phylum 4. Chlorobacteria [ 6Chloroflexus ]5 Classis 1(8). Ktedonobacteres [ 5Ktedonobacter ] sed.m. 2(9). Thermomicrobia [ 5Thermomicrobium ] 3(10). Chloroflexi [ 5Chloroflexus ] ∗Only recent taxa. Viruses are not included. Abbreviations and signs: sed.m. (sedis mutabilis); stat.m. (status mutabilis): s., aut i. (superior, aut interior); i.s. (incertae sedis); sed.p. (sedis possibilis); s.str. (sensu stricto); s.l. (sensu lato); incl. (inclusum); excl. (exclusum); \quotes" for environmental groups; * (asterisk) for paraphyletic taxa; / (slash) at margins for major clades (\domains"). 1Incl. \Nanobacteria" i.s. et dubitativa, \OP11 group" i.s. 2Incl. \TM7" i.s., \OP9", \OP10". 3Incl. Dictyoglomi sed.m., Fusobacteria, Thermolithobacteria. 4= Deinococcus{Thermus. 5Incl. Thermobaculum i.s. 1 4(11). Dehalococcoidetes [ 5Dehalococcoides ] 5(12). Anaerolineae [ 5Anaerolinea ]6 Phylum 5. Cyanobacteria [ 6Nostoc ] Classis 1(13). Gloeobacteres [ 5Gloeobacter ] 2(14). Chroobacteres [ 5Chroococcus ]7 3(15). Hormogoneae [ 5Nostoc ] Phylum 6. Bacteroidobacteria [ 6Bacteroides ]8 Classis 1(16). Fibrobacteres [ 5Fibrobacter ] 2(17). Chlorobi [ 5Chlorobium ] 3(18). Salinibacteres [ 5Salinibacter ] 4(19). Bacteroidetes [ 5Bacteroides ]9 Phylum 7. Spirobacteria [ 6Spirochaeta ] Classis 1(20). Spirochaetes [ 5Spirochaeta ] s.l.10 Phylum 8. Planctobacteria [ 6Planctomyces ]11 Classis 1(21). -
Fossils and Plant Phylogeny1
American Journal of Botany 91(10): 1683±1699. 2004. FOSSILS AND PLANT PHYLOGENY1 PETER R. CRANE,2,5 PATRICK HERENDEEN,3 AND ELSE MARIE FRIIS4 2Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK; 3Department of Biological Sciences, The George Washington University, Washington DC 20052 USA; 4Department of Palaeobotany, Swedish Museum of Natural History, Box 50007, S-104 05 Stockholm, Sweden Developing a detailed estimate of plant phylogeny is the key ®rst step toward a more sophisticated and particularized understanding of plant evolution. At many levels in the hierarchy of plant life, it will be impossible to develop an adequate understanding of plant phylogeny without taking into account the additional diversity provided by fossil plants. This is especially the case for relatively deep divergences among extant lineages that have a long evolutionary history and in which much of the relevant diversity has been lost by extinction. In such circumstances, attempts to integrate data and interpretations from extant and fossil plants stand the best chance of success. For this to be possible, what will be required is meticulous and thorough descriptions of fossil material, thoughtful and rigorous analysis of characters, and careful comparison of extant and fossil taxa, as a basis for determining their systematic relationships. Key words: angiosperms; fossils; paleobotany; phylogeny; spermatophytes; tracheophytes. Most biological processes, such as reproduction or growth distic context, neither fossils nor their stratigraphic position and development, can only be studied directly or manipulated have any special role in inferring phylogeny, and although experimentally using living organisms. Nevertheless, much of more complex models have been developed (see Fisher, 1994; what we have inferred about the large-scale processes of plant Huelsenbeck, 1994), these have not been widely adopted. -
University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
Heterospory: the Most Iterative Key Innovation in the Evolutionary History of the Plant Kingdom
Biol. Rej\ (1994). 69, l>p. 345-417 345 Printeii in GrenI Britain HETEROSPORY: THE MOST ITERATIVE KEY INNOVATION IN THE EVOLUTIONARY HISTORY OF THE PLANT KINGDOM BY RICHARD M. BATEMAN' AND WILLIAM A. DiMlCHELE' ' Departments of Earth and Plant Sciences, Oxford University, Parks Road, Oxford OXi 3P/?, U.K. {Present addresses: Royal Botanic Garden Edinburiih, Inverleith Rojv, Edinburgh, EIIT, SLR ; Department of Geology, Royal Museum of Scotland, Chambers Street, Edinburgh EHi ijfF) '" Department of Paleohiology, National Museum of Natural History, Smithsonian Institution, Washington, DC^zo^bo, U.S.A. CONTENTS I. Introduction: the nature of hf^terospon' ......... 345 U. Generalized life history of a homosporous polysporangiophyle: the basis for evolutionary excursions into hetcrospory ............ 348 III, Detection of hcterospory in fossils. .......... 352 (1) The need to extrapolate from sporophyte to gametophyte ..... 352 (2) Spatial criteria and the physiological control of heterospory ..... 351; IV. Iterative evolution of heterospory ........... ^dj V. Inter-cladc comparison of levels of heterospory 374 (1) Zosterophyllopsida 374 (2) Lycopsida 374 (3) Sphenopsida . 377 (4) PtiTopsida 378 (5) f^rogymnospermopsida ............ 380 (6) Gymnospermopsida (including Angiospermales) . 384 (7) Summary: patterns of character acquisition ....... 386 VI. Physiological control of hetcrosporic phenomena ........ 390 VII. How the sporophyte progressively gained control over the gametophyte: a 'just-so' story 391 (1) Introduction: evolutionary antagonism between sporophyte and gametophyte 391 (2) Homosporous systems ............ 394 (3) Heterosporous systems ............ 39(1 (4) Total sporophytic control: seed habit 401 VIII. Summary .... ... 404 IX. .•Acknowledgements 407 X. References 407 I. I.NIRODUCTION: THE NATURE OF HETEROSPORY 'Heterospory' sensu lato has long been one of the most popular re\ie\v topics in organismal botany. -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
"Palm Trees of the Amazon and Their Uses" by Alfred Russel Wallace
742 THE GARDENERS' CHRONICLE is still none immediately at the mouth or on the banks of the Rio Negro, The next rivers, the Curicuriari, the great river Uaupes, and tbe Isanna, though all black water, have none ; while further on, in the Xie, it again appears, On entering Venezuela it is found near the banks of the Rio Negro, and is abundant all up to its sources, and in the Temi and Atabapo, black-water tributaries of the Orinoco, This seems to be its northern limit, and I cannot hear of its again appear- ing in any part of the Amazon or Orinoco or their tributaries, It is thus entirely restricted to a district about 500 miles from N. to S. and all equal distance from E. to W. I am enabled so exactly to mark out ita range, from having resided more than two years in various parts of the Rio Negro, among people whose principal occupation consisted in obtaining the fibrous covering of this tree, and from whom no locality for it can have remained undiscovered, assisted as they are by the Indians, whose home is the forest, and who are almost as well acquainted with its trackless depths as we are with the well-beaten roads of our own island. The fibre imported into this country has been sup posed to be produced only by the Attalea funifera, a species not found in the Amazon district. In the London Journal of Botany for 1849, Sir W. Hooker gave some account of the material, and of the tree pro ducing it; stating that he had received the fruit of the tree with the fibre from a mercantile house connected with Brazil, and that the fruit was that of the Attalea funifera. -
Earliest Record of Megaphylls and Leafy Structures, and Their Initial Diversification
Review Geology August 2013 Vol.58 No.23: 27842793 doi: 10.1007/s11434-013-5799-x Earliest record of megaphylls and leafy structures, and their initial diversification HAO ShouGang* & XUE JinZhuang Key Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, Beijing 100871, China Received January 14, 2013; accepted February 26, 2013; published online April 10, 2013 Evolutionary changes in the structure of leaves have had far-reaching effects on the anatomy and physiology of vascular plants, resulting in morphological diversity and species expansion. People have long been interested in the question of the nature of the morphology of early leaves and how they were attained. At least five lineages of euphyllophytes can be recognized among the Early Devonian fossil plants (Pragian age, ca. 410 Ma ago) of South China. Their different leaf precursors or “branch-leaf com- plexes” are believed to foreshadow true megaphylls with different venation patterns and configurations, indicating that multiple origins of megaphylls had occurred by the Early Devonian, much earlier than has previously been recognized. In addition to megaphylls in euphyllophytes, the laminate leaf-like appendages (sporophylls or bracts) occurred independently in several dis- tantly related Early Devonian plant lineages, probably as a response to ecological factors such as high atmospheric CO2 concen- trations. This is a typical example of convergent evolution in early plants. Early Devonian, euphyllophyte, megaphyll, leaf-like appendage, branch-leaf complex Citation: Hao S G, Xue J Z. Earliest record of megaphylls and leafy structures, and their initial diversification. Chin Sci Bull, 2013, 58: 27842793, doi: 10.1007/s11434- 013-5799-x The origin and evolution of leaves in vascular plants was phology and evolutionary diversification of early leaves of one of the most important evolutionary events affecting the basal euphyllophytes remain enigmatic. -
THE EVOLUTION of XYLEM ANATOMY in EARLY TRACHEOPHYTES by ELISABETH ANNE BERGMAN
Conquering the terrestrial environment: the evolution of xylem anatomy in early tracheophytes Item Type text; Electronic Thesis Authors Bergman, Elisabeth Anne Publisher The University of Arizona. Rights Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. Download date 27/09/2021 03:01:29 Item License http://rightsstatements.org/vocab/InC/1.0/ Link to Item http://hdl.handle.net/10150/626731 CONQUERING THE TERRESTRIAL ENVIRONMENT: THE EVOLUTION OF XYLEM ANATOMY IN EARLY TRACHEOPHYTES By ELISABETH ANNE BERGMAN ____________________ A Thesis Submitted to The Honors College In Partial Fulfillment of the Bachelors Degree With Honors in Biology with an Emphasis in Biomedical Sciences THE UNIVERSITY OF ARIZONA D E C E M B E R 2 0 1 7 Approved by: ____________________________ Dr. Brian Enquist Department of Ecology and Evolutionary Biology Acknowledgements Many thanks go to all of those who made contributions, big and small, to my honors thesis, and more notably, my education. Foremost, I thank Dr. Brian Enquist for accepting me into his lab and serving as my mentor for two years. I appreciate all of the time he put in to meet with me and help me to develop my honors thesis. Additional thanks go to Dr. Sean Michaletz who first introduced me to the work that would eventually become my honors thesis. From the University of Santa Cruz, California, I thank Dr. -
System Klasyfikacji Organizmów
1 SYSTEM KLASYFIKACJI ORGANIZMÓW Nie ma dziś ogólnie przyjętego systemu klasyfikacji organizmów. Nie udaje się osiągnąć zgodności nie tylko w odniesieniu do zakresów i rang poszczególnych taksonów, ale nawet co do zasad metodologicznych, na których klasyfikacja powinna być oparta. Zespołowe dzieła przeglądowe z reguły prezentują odmienne i wzajemnie sprzeczne podejścia poszczególnych autorów, bez nadziei na consensus. Nie ma więc mowy o skompilowaniu jednolitego schematu klasyfikacji z literatury i system przedstawiony poniżej nie daje nadziei na zaakceptowanie przez kogokolwiek poza kompilatorem. Przygotowany został w oparciu o kilka zasad (skądinąd bardzo kontrowersyjnych): (1) Identyfikowanie ga- tunków i ich klasyfikowanie w jednostki rodzajowe, rodzinowe czy rzędy jest zadaniem specjalistów i bez szcze- gółowych samodzielnych studiów nie można kwestionować wyników takich badań. (2) Podział świata żywego na królestwa, typy, gromady i rzędy jest natomiast domeną ewolucjonistów i dydaktyków. Powody, które posłużyły do wydzielenia jednostek powinny być jasno przedstawialne i zrozumiałe również dla niespecjalistów, albowiem (3) podstawowym zadaniem systematyki jest ułatwianie laikom i początkującym badaczom poruszanie się w obezwładniającej złożoności świata żywego. Wątpliwe jednak, by wystarczyło to do stworzenia zadowalającej klasyfikacji. W takiej sytuacji można jedynie przypomnieć, że lepszy ułomny system, niż żaden. Królestwo PROKARYOTA Chatton, 1938 DNA wyłącznie w postaci kolistej (genoforów), transkrypcja nie rozdzielona przestrzennie od translacji – rybosomy w tym samym przedzia- le komórki, co DNA. Oddział CYANOPHYTA Smith, 1938 (Myxophyta Cohn, 1875, Cyanobacteria Stanier, 1973) Stosunkowo duże komórki, dwuwarstwowa błona (Gram-ujemne), wewnętrzna warstwa mureinowa. Klasa CYANOPHYCEAE Sachs, 1874 Rząd Stigonematales Geitler, 1925; zigen – dziś Chlorofil a na pojedynczych tylakoidach. Nitkowate, rozgałęziające się, cytoplazmatyczne połączenia mię- Rząd Chroococcales Wettstein, 1924; 2,1 Ga – dziś dzy komórkami, miewają heterocysty. -
Giant Cladoxylopsid Trees Resolve Enigma of the Earth's Earliest Forest Stumps at Gilboa
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/6385893 Giant cladoxylopsid trees resolve enigma of the Earth's earliest forest stumps at Gilboa Article in Nature · May 2007 DOI: 10.1038/nature05705 · Source: PubMed CITATIONS READS 91 254 5 authors, including: Frank Mannolini Linda VanAller Hernick New York State Museum New York State Museum 8 PUBLICATIONS 160 CITATIONS 9 PUBLICATIONS 253 CITATIONS SEE PROFILE SEE PROFILE Ed Landing Christopher Berry New York State Museum Cardiff University 244 PUBLICATIONS 3,365 CITATIONS 48 PUBLICATIONS 862 CITATIONS SEE PROFILE SEE PROFILE All content following this page was uploaded by Ed Landing on 06 February 2017. The user has requested enhancement of the downloaded file. All in-text references underlined in blue are added to the original document and are linked to publications on ResearchGate, letting you access and read them immediately. Vol 446 | 19 April 2007 | doi:10.1038/nature05705 LETTERS Giant cladoxylopsid trees resolve the enigma of the Earth’s earliest forest stumps at Gilboa William E. Stein1, Frank Mannolini2, Linda VanAller Hernick2, Ed Landing2 & Christopher M. Berry3 The evolution of trees of modern size growing together in forests Middle Devonian (Eifelian) into the Carboniferous, were major fundamentally changed terrestrial ecosystems1–3. The oldest trees contributors to floras worldwide14. Traditionally considered inter- are often thought to be of latest Devonian age (about 380–360 Myr mediate between Lower Devonian vascular plants and ferns or old) as indicated by the widespread occurrence of Archaeopteris sphenopsids, we do not yet understand these plants well enough to (Progymnospermopsida)4.