Arbuscular Mycorrhization Enhances Nitrogen, Phosphorus and Potassium Accumulation in Vicia Faba by Modulating Soil Nutrient Balance Under Elevated CO2
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The Obligate Endobacteria of Arbuscular Mycorrhizal Fungi Are Ancient Heritable Components Related to the Mollicutes
The ISME Journal (2010) 4, 862–871 & 2010 International Society for Microbial Ecology All rights reserved 1751-7362/10 $32.00 www.nature.com/ismej ORIGINAL ARTICLE The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes Maria Naumann1,2, Arthur Schu¨ ler2 and Paola Bonfante1 1Department of Plant Biology, University of Turin and IPP-CNR, Turin, Italy and 2Department of Biology, Inst. Genetics, University of Munich (LMU), Planegg-Martinsried, Germany Arbuscular mycorrhizal fungi (AMF) have been symbionts of land plants for at least 450 Myr. It is known that some AMF host in their cytoplasm Gram-positive endobacteria called bacterium-like organisms (BLOs), of unknown phylogenetic origin. In this study, an extensive inventory of 28 cultured AMF, from diverse evolutionary lineages and four continents, indicated that most of the AMF species investigated possess BLOs. Analyzing the 16S ribosomal DNA (rDNA) as a phylogenetic marker revealed that BLO sequences from divergent lineages all clustered in a well- supported monophyletic clade. Unexpectedly, the cell-walled BLOs were shown to likely represent a sister clade of the Mycoplasmatales and Entomoplasmatales, within the Mollicutes, whose members are lacking cell walls and show symbiotic or parasitic lifestyles. Perhaps BLOs maintained the Gram-positive trait whereas the sister groups lost it. The intracellular location of BLOs was revealed by fluorescent in situ hybridization (FISH), and confirmed by pyrosequencing. BLO DNA could only be amplified from AMF spores and not from spore washings. As highly divergent BLO sequences were found within individual fungal spores, amplicon libraries derived from Glomus etunicatum isolates from different geographic regions were pyrosequenced; they revealed distinct sequence compositions in different isolates. -
Biomass Accumulation and Partitioning of Tomato Under Protected Cultivation in the Humid Tropics
Europ.J.Hort.Sci., 71 (4). S. 173–182, 2006, ISSN 1611-4426. © Verlag Eugen Ulmer KG, Stuttgart Biomass Accumulation and Partitioning of Tomato under Protected Cultivation in the Humid Tropics V. Kleinhenz1), K. Katroschan1), F. Schütt1) and H. Stützel2) (1)Asian Institute of Technology, ASE/SERD, Klong Luang, Thailand and 2) Hanover University, Faculty of Horticulture, Institute of Vegetable Production, Hanover, Germany) Summary Results of a 2-year structural analysis of indeterminate sink strength resulting from poor fruit set were de- tomato (Lycopersicon esculentum Mill.) cultivated dur- formed leaves and accelerated growth of auxiliary ing different seasons under protected cultivation (ven- shoots. When canopy density was increased by culti- tilated greenhouses with PE-film roofs and PE-net vating tomato with double stems, total fruit biomass walls) in the humid tropics of Central Thailand are per plant was significantly improved by ca. 13 %. presented. Under the prevailing high-radiation condi- Within these plants, ca. 100 % more biomass was par- tions (ø 35.9 MJ m–2 outside and 23.7 MJ m–2 inside titioned into fruits of the primary stem than the sec- of the greenhouse), total dry-mass production was ondary stem. Since leaf biomass and area did not vary 2.6 g MJ–1 and similar to regions at greater latitude significantly between individual stems, there was indi- with much lower global radiation. Plant density cation that secondary stems improved availability of (2.1 plants m–2 in single rows vs. 4.2 plants m–2 in assimilates which promoted biomass partitioning into double rows) had no meaningful effect on biomass fruits on primary stems. -
Population Genomics Reveals That Within-Fungus Polymorphism Is Common and Maintained in Populations of the Mycorrhizal Fungus Rhizophagus Irregularis
The ISME Journal (2016) 10, 2514–2526 © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 OPEN www.nature.com/ismej ORIGINAL ARTICLE Population genomics reveals that within-fungus polymorphism is common and maintained in populations of the mycorrhizal fungus Rhizophagus irregularis Tania Wyss1,3, Frédéric G Masclaux1,2,3, Pawel Rosikiewicz1, Marco Pagni2,4 and Ian R Sanders1,4 1Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland and 2Vital-IT, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland Arbuscular mycorrhizal (AM) fungi are symbionts of most plants, increasing plant growth and diversity. The model AM fungus Rhizophagus irregularis (isolate DAOM 197198) exhibits low within- fungus polymorphism. In contrast, another study reported high within-fungus variability. Experiments with other R. irregularis isolates suggest that within-fungus genetic variation can affect the fungal phenotype and plant growth, highlighting the biological importance of such variation. We investigated whether there is evidence of differing levels of within-fungus polymorphism in an R. irregularis population. We genotyped 20 isolates using restriction site-associated DNA sequencing and developed novel approaches for characterizing polymorphism among haploid nuclei. All isolates exhibited higher within-isolate poly-allelic single-nucleotide polymorphism (SNP) densities than DAOM 197198 in repeated and non-repeated sites mapped to the reference genome. Poly-allelic SNPs were independently confirmed. Allele frequencies within isolates deviated from diploids or tetraploids, or that expected for a strict dikaryote. Phylogeny based on poly-allelic sites was robust and mirrored the standard phylogeny. This indicates that within-fungus genetic variation is maintained in AM fungal populations. -
Effect of Fungicides on Association of Arbuscular Mycorrhiza Fungus Rhizophagus Fasciculatus and Growth of Proso Millet (Panicum Miliaceum L.)
Journal of Soil Science and Plant Nutrition, 2015, 15 (1), 35-45 RESEARCH ARTICLE Effect of fungicides on association of arbuscular mycorrhiza fungus Rhizophagus fasciculatus and growth of Proso millet (Panicum miliaceum L.) Channabasava1*, H.C. Lakshman1 and M.A. Jorquera2 1Microbiology Laboratory, P.G. Department of Studies in Botany, Karnataka University, Pavate Nagar, Dharwad-580 003, India. 2Scientific and Technological Bioresource Nucleus, Universidad de La Frontera, Ave. Francisco Salazar 01145, Temuco, Chile.*Corresponding author: [email protected] Abstract The detrimental effects of fungicides on non-target beneficial microorganisms such as arbuscular mycorrhizal (AM) fungi are of interest to agriculture. Rhizophagus fasciculatus was found to be predominant (21%) AM fungus in studied soil compared to other species (2-9%). Hence, we have conducted a study to evaluate the potential effects of fungicides Benomyl (Methyl [1-[(butylamino) carbonyl]-1H-benzimidazol-2-yl] carbamate), Bavistin (methyl benzimidazol-2-ylcarbamate), Captan ((3aR,7aS)-2-[(trichloromethyl) sulfanyl]-3a,4,7,7a– tetra hydro-1H-isoindole-1,3(2H)-dione and Mancozeb (manganese ethylene-bis(dithiocarbamate) (polymeric) complex with zinc salt) on association of R. fasciculatus with Proso millet (Panicum miliaceum L.), an emerging drought-resistant crop that represent a cheap source of nutrients for human in developing country. The results of this study showed significant (P≤0.05) higher AM colonization (69.7%), spore density (193 spores), plant growth (both lengths and weights of shoots and roots) and grain yield (154 grains per panicle) in mycorrhizal Proso millet plants treated with Captan compared to other fungicides and untreated controls. In contrast, Benomyl had adverse effect in all parameters measured (45.3% AM colonization, 123 spores, 105 grains per panicle, etc.). -
Occurrence of Glomeromycota Species in Aquatic Habitats: a Global Overview
Occurrence of Glomeromycota species in aquatic habitats: a global overview MARIANA BESSA DE QUEIROZ1, KHADIJA JOBIM1, XOCHITL MARGARITO VISTA1, JULIANA APARECIDA SOUZA LEROY1, STEPHANIA RUTH BASÍLIO SILVA GOMES2, BRUNO TOMIO GOTO3 1 Programa de Pós-Graduação em Sistemática e Evolução, 2 Curso de Ciências Biológicas, and 3 Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Campus Universitário, 59072-970, Natal, RN, Brazil * CORRESPONDENCE TO: [email protected] ABSTRACT — Arbuscular mycorrhizal fungi (AMF) are recognized in terrestrial and aquatic ecosystems. The latter, however, have received little attention from the scientific community and, consequently, are poorly known in terms of occurrence and distribution of this group of fungi. This paper provides a global list on AMF species inhabiting aquatic ecosystems reported so far by scientific community (lotic and lentic freshwater, mangroves, and wetlands). A total of 82 species belonging to 5 orders, 11 families, and 22 genera were reported in 8 countries. Lentic ecosystems have greater species richness. Most studies of the occurrence of AMF in aquatic ecosystems were conducted in the United States and India, which constitute 45% and 78% reports coming from temperate and tropical regions, respectively. KEY WORDS — checklist, flooded areas, mycorrhiza, taxonomy Introduction Aquatic ecosystems comprise about 77% of the planet surface (Rebouças 2006) and encompass a diversity of habitats favorable to many species from marine (ocean), transitional estuaries to continental (wetlands, lentic and lotic) environments (Reddy et al. 2018). Despite this territorial representativeness and biodiversity already recorded, there are gaps when considering certain types of organisms, e.g. fungi. Fungi are considered a common and important component of almost all trophic levels. -
Does Mycorrhizal Status Alter Herbivore-Induced Changes in Whole-Plant Resource Partitioning?
Research Article Does mycorrhizal status alter herbivore-induced changes in whole-plant resource partitioning? Colin M. Orians*, Sara Gomez and Timothy Korpita Department of Biology, Tufts University, 200 College Ave, Medford, MA 02155, USA Received: 12 June 2017 Editorial decision: 21 November 2017 Accepted: 7 December 2017 Published: 15 December 2017 Associate Editor: Karina Boege Citation: Orians CM, Gomez S, Korpita T. 2018. Does mycorrhizal status alter herbivore-induced changes in whole-plant resource partitioning? AoB PLANTS 10: plx071; doi: 10.1093/aobpla/plx071 Abstract. Both mycorrhizae and herbivore damage cause rapid changes in source–sink dynamics within a plant. Mycorrhizae create long-term sinks for carbon within the roots while damage by leaf-chewing herbivores causes temporary whole-plant shifts in carbon and nitrogen allocation. Thus, induced responses to herbivory might depend on the presence or absence of mycorrhizae. We examined the effects of mycorrhizal presence on induced resource partitioning in tomato (Solanum lycopersicon) in response to cues from a specialist herbivore Manduca sexta. Differences in plant size, growth and in the concentrations of carbon-based (soluble sugars and starch) and nitrogen-based (protein and total nitrogen) resources in three tissue types (apex, stem and roots) were quantified. Both mycorrhizae and simulated herbivory altered the concentrations of carbon- and nitrogen-based resources. Mycorrhizae promoted plant growth, altered sugar and starch levels. Simulated herbivory resulted in lower concen- trations of most resources (sugar, starch and protein) in the rapidly growing apex tissue, while causing an increase in stem protein. There was only one interactive effect; the effects of simulated herbivory were much stronger on the sugar concentration in the apex of non-mycorrhizal plants. -
How to Cite Complete Issue More Information About This Article
Revista mexicana de biodiversidad ISSN: 1870-3453 ISSN: 2007-8706 Instituto de Biología Álvarez-Lopeztello, Jonás; Hernández-Cuevas, Laura V.; Castillo, Rafael F. del; Robles, Celerino Second world record of Glomus trufemii (Glomeromycota: Fungi), an arbuscular mycorrhizal fungus from a Mexican savanna Revista mexicana de biodiversidad, vol. 89, no. 1, 2018, pp. 298-300 Instituto de Biología DOI: 10.22201/ib.20078706e.2018.1.2101 Available in: http://www.redalyc.org/articulo.oa?id=42559253025 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Project academic non-profit, developed under the open access initiative Revista Mexicana de Biodiversidad 89 (2018): 298-300 Research note Second world record of Glomus trufemii (Glomeromycota: Fungi), an arbuscular mycorrhizal fungus from a Mexican savanna Segundo registro mundial de Glomus trufemii (Glomeromycota: Fungi), un hongo micorrízico arbuscular de una sabana mexicana Jonás Álvarez-Lopeztello a, Laura V. Hernández-Cuevas b, *, Rafael F. del Castillo a, Celerino Robles a a Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional, Oaxaca, Instituto Politécnico Nacional, Hornos 1003, 71230 Santa Cruz Xoxocotlán, Oaxaca, Mexico b Centro de Investigación en Genética y Ambiente, Universidad Autónoma de Tlaxcala, Km 10.5 Autopista Texmelucan-Tlaxcala, 90120 Ixtacuixtla, Tlaxcala, Mexico *Corresponding author: [email protected] (L.V. Hernández-Cuevas) Received: 25 January 2017; accepted: 07 September 2017 Abstract In Mexico, studies of diversity of arbuscular mycorrhizal fungi (AMF) are still scarce. Here we report the second record in the world, and the first record in Mexico of Glomus trufemii (Glomeraceae) from a tropical humid savanna. -
Ionizing Radiation: How Fungi Cope, Adapt, and Exploit with the Help of Melanin Ekaterina Dadachova1 and Arturo Casadevall2
Available online at www.sciencedirect.com Ionizing radiation: how fungi cope, adapt, and exploit with the help of melanin Ekaterina Dadachova1 and Arturo Casadevall2 Life on Earth has always existed in the flux of ionizing radiation. life forms. Large quantities of highly melanized fungal However, fungi seem to interact with the ionizing radiation spores have been found in early Cretaceous period depos- differently from other inhabitants of the Earth. Recent data its when many species of animals and plants died out. show that melanized fungal species like those from This period coincides with Earth’s crossing the ‘magnetic Chernobyl’s reactor respond to ionizing radiation with zero’ resulting in the loss of its ‘shield’ against cosmic enhanced growth. Fungi colonize space stations and adapt radiation [2]. Additionally, it has been suggested that morphologically to extreme conditions. Radiation exposure radiation from a putative passing star called Nemesis causes upregulation of many key genes, and an inducible might have contributed to extinction events [3]. Fungi microhomology-mediated recombination pathway could be a in general, and especially melanized ones, are highly potential mechanism of adaptive evolution in eukaryotes. The radioresistant when subjected to high doses of ionizing discovery of melanized organisms in high radiation radiation under experimental conditions [4–7]. Under- environments, the space stations, Antarctic mountains, and in standably, such unusual abilities of eukaryotes to survive the reactor cooling water combined with phenomenon of or maybe even benefit from exposure to ionizing radiation ‘radiotropism’ raises the tantalizing possibility that melanins are in contrast to the general view that radiation is have functions analogous to other energy harvesting pigments uniformly harmful to life. -
The Genome of Rhizophagus Clarus HR1 Reveals a Common Genetic
Kobayashi et al. BMC Genomics (2018) 19:465 https://doi.org/10.1186/s12864-018-4853-0 RESEARCHARTICLE Open Access The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi Yuuki Kobayashi1, Taro Maeda1, Katsushi Yamaguchi2, Hiromu Kameoka1, Sachiko Tanaka1, Tatsuhiro Ezawa3, Shuji Shigenobu2,4 and Masayoshi Kawaguchi1,4* Abstract Background: Mycorrhizal symbiosis is one of the most fundamental types of mutualistic plant-microbe interaction. Among the many classes of mycorrhizae, the arbuscular mycorrhizae have the most general symbiotic style and the longest history. However, the genomes of arbuscular mycorrhizal (AM) fungi are not well characterized due to difficulties in cultivation and genetic analysis. In this study, we sequenced the genome of the AM fungus Rhizophagus clarus HR1, compared the sequence with the genome sequence of the model species R. irregularis, and checked for missing genes that encode enzymes in metabolic pathways related to their obligate biotrophy. Results: In the genome of R. clarus, we confirmed the absence of cytosolic fatty acid synthase (FAS), whereas all mitochondrial FAS components were present. A KEGG pathway map identified the absence of genes encoding enzymes for several other metabolic pathways in the two AM fungi, including thiamine biosynthesis and the conversion of vitamin B6 derivatives. We also found that a large proportion of the genes encoding glucose-producing polysaccharide hydrolases, that are present even in ectomycorrhizal fungi, also appear to be absent in AM fungi. Conclusions: In this study, we found several new genes that are absent from the genomes of AM fungi in addition to the genes previously identified as missing. -
Impact of Water Stress Under Ambient and Elevated Carbon Dioxide Across Three Temperature Regimes on Soybean Canopy Gas Exchange and Productivity Shardendu K
www.nature.com/scientificreports OPEN Impact of water stress under ambient and elevated carbon dioxide across three temperature regimes on soybean canopy gas exchange and productivity Shardendu K. Singh1,3*, Vangimalla R. Reddy1, Mura Jyostna Devi1,2* & Dennis J. Timlin1 The present study investigated the interactive efects of three environmental stress factors elevated CO2, temperature, and drought stress on soybean growth and yield. Experiments were conducted in the sunlit, controlled environment Soil–Plant–Atmosphere–Research chambers under two-level of −1 irrigation (WW-well water and WS-water stress-35%WW) and CO2 (aCO2-ambient 400 µmol mol and −1 eCO2-elevated 800 µmol mol ) and each at the three day/night temperature regimes of 24/18 °C (MLT- moderately low), 28/22 °C (OT-optimum), and 32/26 °C (MHT-moderately high). Results showed the greatest negative impact of WS on plant traits such as canopy photosynthesis (PCnet), total dry weight (TDwt), and seed yield. The decreases in these traits under WS ranged between 40 and 70% averaged across temperature regimes with a greater detrimental impact in plants grown under aCO2 than eCO2. The MHT had an increased PCnet, TDwt, and seed yield primarily under eCO2, with a greater increase under WW than WS conditions. The eCO2 stimulated PCnet, TDwt, and seed yield more under WS than WW. For instance, on average across T regimes, eCO2 stimulated around 25% and 90% dry mass under WW and WS, respectively, relative to aCO2. Overall, eCO2 appears to beneft soybean productivity, at least partially, under WS and the moderately warmer temperature of this study. -
Fungi, Glomeromycota, Glomerales) As Being of Neuter Gender
TAXON 58 (2) • May 2009: 647 Kuyper • (1888) Conserve Glomus PROPOSALS TO CONSERVE OR REJECT NAMES Edited by John McNeill, Scott A. Redhead & John H. Wiersema (1888) Proposal to conserve the name Glomus (Fungi, Glomeromycota, Glomerales) as being of neuter gender Thomas W. Kuyper Department of Soil Quality, Wageningen University, P.O. Box 47, 6700 AA Wageningen, The Netherlands. [email protected] (1888) Glomus Tul. & C. Tul. in Giorn. Bot. Ital. Anno 1, griseus” respectively, and continues to use the masculine 2(1): 63. 11 Mai 1845, nom. et gen. neut. cons. prop. form, whereas new species in the genus Tuber, which they Typus: G. macrocarpum Tul. & C. Tul. (‘macro- treated as neuter, the diagnosis starts as “mediocre globo- carpus’) sum”, “globosum” and “rotundatum”. Which gender should The majority of plant species form mycorrhiza, a mu- then be correct? Article 62 of the ICBN (McNeill & al. in tually beneficial symbiosis between plant roots and certain Regnum Veg. 146. 2006) provides the answer to that ques- root-inhabiting fungi. The presence and type of mycorrhiza tion. The article mentions three criteria in descending order is also an important character in plant taxonomy and phy- of importance, viz., botanical tradition, the author’s original logeny. The arbuscular mycorrhizal association is by far usage, and classical usage (even though Note 1 tries to link the most important kind of these symbioses. Evolution of original usage and classical usage, which is a bit confusing the group made the conquest of the land by the first root- in an otherwise clear rule). I have been unable to find in- less plants possible. -
1 a Native and an Invasive Dune Grass Share
A native and an invasive dune grass share similar, patchily distributed, root-associated fungal communities Renee B Johansen1, Peter Johnston2, Piotr Mieczkowski3, George L.W. Perry4, Michael S. Robeson5, 1 6 Bruce R Burns , Rytas Vilgalys 1: School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland Mail Centre, Auckland 1142, New Zealand 2: Landcare Research, Private Bag 92170, Auckland Mail Centre, Auckland 1142, New Zealand 3: Department of Genetics, University of North Carolina, Chapel Hill, North Carolina, U.S.A. 4: School of Environment, The University of Auckland, Private Bag 92019, Auckland, New Zealand 5: Fish, Wildlife and Conservation Biology, Colorado State University, Fort Collins, CO, USA 6: Department of Biology, Duke University, Durham, NC 27708, USA Corresponding author: Renee Johansen, Ph: +64 21 0262 9143, Fax: +64 9 574 4101 Email: [email protected] For the published version of this article see here: https://www.sciencedirect.com/science/article/abs/pii/S1754504816300848 1 Abstract Fungi are ubiquitous occupiers of plant roots, yet the impact of host identity on fungal community composition is not well understood. Invasive plants may benefit from reduced pathogen impact when competing with native plants, but suffer if mutualists are unavailable. Root samples of the invasive dune grass Ammophila arenaria and the native dune grass Leymus mollis were collected from a Californian foredune. We utilised the Illumina MiSeq platform to sequence the ITS and LSU gene regions, with the SSU region used to target arbuscular mycorrhizal fungi (AMF). The two plant species largely share a fungal community, which is dominated by widespread generalists.