Deepening Well-Being Evaluation with Different Data Sources: a Bayesian Networks Approach
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Common Quandaries and Their Practical Solutions in Bayesian Network Modeling
Ecological Modelling 358 (2017) 1–9 Contents lists available at ScienceDirect Ecological Modelling journa l homepage: www.elsevier.com/locate/ecolmodel Common quandaries and their practical solutions in Bayesian network modeling Bruce G. Marcot U.S. Forest Service, Pacific Northwest Research Station, 620 S.W. Main Street, Suite 400, Portland, OR, USA a r t i c l e i n f o a b s t r a c t Article history: Use and popularity of Bayesian network (BN) modeling has greatly expanded in recent years, but many Received 21 December 2016 common problems remain. Here, I summarize key problems in BN model construction and interpretation, Received in revised form 12 May 2017 along with suggested practical solutions. Problems in BN model construction include parameterizing Accepted 13 May 2017 probability values, variable definition, complex network structures, latent and confounding variables, Available online 24 May 2017 outlier expert judgments, variable correlation, model peer review, tests of calibration and validation, model overfitting, and modeling wicked problems. Problems in BN model interpretation include objec- Keywords: tive creep, misconstruing variable influence, conflating correlation with causation, conflating proportion Bayesian networks and expectation with probability, and using expert opinion. Solutions are offered for each problem and Modeling problems researchers are urged to innovate and share further solutions. Modeling solutions Bias Published by Elsevier B.V. Machine learning Expert knowledge 1. Introduction other fields. Although the number of generally accessible journal articles on BN modeling has continued to increase in recent years, Bayesian network (BN) models are essentially graphs of vari- achieving an exponential growth at least during the period from ables depicted and linked by probabilities (Koski and Noble, 2011). -
The Beginning of High Mountain Occupations in the Pyrenees. Human Settlements and Mobility from 18,000 Cal BC to 2000 Cal BC
Chapter 4 The Beginning of High Mountain Occupations in the Pyrenees. Human Settlements and Mobility from 18,000 cal BC to 2000 cal BC Ermengol Gassiot Ballbè, Niccolò Mazzucco, Ignacio Clemente Conte, David Rodríguez Antón, Laura Obea Gómez, Manuel Quesada Carrasco and Sara Díaz Bonilla Abstract During the last two decades, the archaeological research carried out in the Pyrenees challenged the traditional images of the past in this mountain area. The archaeological sequence of the range goes back and sites like Balma Margineda, treated until recently as an exception, now are seen as part of more global process. Actual data suggest that main valleys of the Pyrenean frequented by humans at the end of the last glacial period, with sites slightly over 1000 o.s.l. After the Younger Dryas, the human presence ascended to alpine and subalpine areas, in accordance with current archaeological data. The Neolisitation process was early in some hillsides, with intense remains of farming and pastoralism in many sites from dated in the second half of the 6th millennia cal BC. Human settlements like Coro Tracito, Els Trocs and El Sardo confirm the full introduction of agrarian activity in the central part of the Pyrenees between 5300 and 4600 cal BC. After 3500/3300 cal BC the indices oh sheepherding rises to alpine areas, with an abrupt increase of known archaeological sites in alpine areas, above the current timberline. This phenomena, as well as the signs of anthropic disturbance of the alpine environment in sedimentary sequences, suggests a more stable and ubiquitous human presence, probably largely associated with the development of mobile herding practices. -
Bayesian Network Modelling with Examples
Bayesian Network Modelling with Examples Marco Scutari [email protected] Department of Statistics University of Oxford November 28, 2016 What Are Bayesian Networks? Marco Scutari University of Oxford What Are Bayesian Networks? A Graph and a Probability Distribution Bayesian networks (BNs) are defined by: a network structure, a directed acyclic graph G = (V;A), in which each node vi 2 V corresponds to a random variable Xi; a global probability distribution X with parameters Θ, which can be factorised into smaller local probability distributions according to the arcs aij 2 A present in the graph. The main role of the network structure is to express the conditional independence relationships among the variables in the model through graphical separation, thus specifying the factorisation of the global distribution: p Y P(X) = P(Xi j ΠXi ;ΘXi ) where ΠXi = fparents of Xig i=1 Marco Scutari University of Oxford What Are Bayesian Networks? How the DAG Maps to the Probability Distribution Graphical Probabilistic DAG separation independence A B C E D F Formally, the DAG is an independence map of the probability distribution of X, with graphical separation (??G) implying probabilistic independence (??P ). Marco Scutari University of Oxford What Are Bayesian Networks? Graphical Separation in DAGs (Fundamental Connections) separation (undirected graphs) A B C d-separation (directed acyclic graphs) A B C A B C A B C Marco Scutari University of Oxford What Are Bayesian Networks? Graphical Separation in DAGs (General Case) Now, in the general case we can extend the patterns from the fundamental connections and apply them to every possible path between A and B for a given C; this is how d-separation is defined. -
Between the Local and the National: the Free Territory of Trieste, "Italianita," and the Politics of Identity from the Second World War to the Osimo Treaty
Graduate Theses, Dissertations, and Problem Reports 2014 Between the Local and the National: The Free Territory of Trieste, "Italianita," and the Politics of Identity from the Second World War to the Osimo Treaty Fabio Capano Follow this and additional works at: https://researchrepository.wvu.edu/etd Recommended Citation Capano, Fabio, "Between the Local and the National: The Free Territory of Trieste, "Italianita," and the Politics of Identity from the Second World War to the Osimo Treaty" (2014). Graduate Theses, Dissertations, and Problem Reports. 5312. https://researchrepository.wvu.edu/etd/5312 This Dissertation is protected by copyright and/or related rights. It has been brought to you by the The Research Repository @ WVU with permission from the rights-holder(s). You are free to use this Dissertation in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you must obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Dissertation has been accepted for inclusion in WVU Graduate Theses, Dissertations, and Problem Reports collection by an authorized administrator of The Research Repository @ WVU. For more information, please contact [email protected]. Between the Local and the National: the Free Territory of Trieste, "Italianità," and the Politics of Identity from the Second World War to the Osimo Treaty Fabio Capano Dissertation submitted to the Eberly College of Arts and Sciences at West Virginia University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Modern Europe Joshua Arthurs, Ph.D., Co-Chair Robert Blobaum, Ph.D., Co-Chair Katherine Aaslestad, Ph.D. -
Empirical Evaluation of Scoring Functions for Bayesian Network Model Selection
Liu et al. BMC Bioinformatics 2012, 13(Suppl 15):S14 http://www.biomedcentral.com/1471-2105/13/S15/S14 PROCEEDINGS Open Access Empirical evaluation of scoring functions for Bayesian network model selection Zhifa Liu1,2†, Brandon Malone1,3†, Changhe Yuan1,4* From Proceedings of the Ninth Annual MCBIOS Conference. Dealing with the Omics Data Deluge Oxford, MS, USA. 17-18 February 2012 Abstract In this work, we empirically evaluate the capability of various scoring functions of Bayesian networks for recovering true underlying structures. Similar investigations have been carried out before, but they typically relied on approximate learning algorithms to learn the network structures. The suboptimal structures found by the approximation methods have unknown quality and may affect the reliability of their conclusions. Our study uses an optimal algorithm to learn Bayesian network structures from datasets generated from a set of gold standard Bayesian networks. Because all optimal algorithms always learn equivalent networks, this ensures that only the choice of scoring function affects the learned networks. Another shortcoming of the previous studies stems from their use of random synthetic networks as test cases. There is no guarantee that these networks reflect real-world data. We use real-world data to generate our gold-standard structures, so our experimental design more closely approximates real-world situations. A major finding of our study suggests that, in contrast to results reported by several prior works, the Minimum Description Length (MDL) (or equivalently, Bayesian information criterion (BIC)) consistently outperforms other scoring functions such as Akaike’s information criterion (AIC), Bayesian Dirichlet equivalence score (BDeu), and factorized normalized maximum likelihood (fNML) in recovering the underlying Bayesian network structures. -
Innovation Ecosystems Ecosystems Innovation Regional
QG-01-16-501-EN-C This book is produced by the Members of the European Committee of the Regions in close collaboration with Europe's cities and regions. The book is all about pioneering cities and regions - or reviewing the content of the book from activities CoR perspective: about regional innovation ecosystems. guide In recent years it has increasingly become apparent that only through sharing knowledge and working in partnership it is possible to st create truly competitive and sustainable economies meeting the needs of the 21 century. In order to achieve this, the European Union Ecosystems Innovation Regional can and must work with and for our citizens. For this to happen we need to achieve a change in mindset. This publication therefore seeks to stimulate bench-learning between regions and cities, sparking new ideas and fundamentally stirring economic development. Presenting some of the most inspiring projects across the EU, this book oers readers an opportunity to understand and explore how Europe's cities and regions are breaking new ground in regional development. The European Committee of the Regions is the EU's Assembly of 350 regional and local representatives from all 28 Member States, representing over 507 million Europeans. This book is an essential part of the process of implementing our political priorities for 2015-2020 and giving Europe's citizens the fresh start they need. In order to overcome its current challenges, Europe must establish a culture of co-creation and break its boundaries by moving towards entrepreneurial discovery, open innovation, experimentation and ISBN: 978-92-895-0876-6 action. -
Bayesian Networks
Bayesian Networks Read R&N Ch. 14.1-14.2 Next lecture: Read R&N 18.1-18.4 You will be expected to know • Basic concepts and vocabulary of Bayesian networks. – Nodes represent random variables. – Directed arcs represent (informally) direct influences. – Conditional probability tables, P( Xi | Parents(Xi) ). • Given a Bayesian network: – Write down the full joint distribution it represents. • Given a full joint distribution in factored form: – Draw the Bayesian network that represents it. • Given a variable ordering and some background assertions of conditional independence among the variables: – Write down the factored form of the full joint distribution, as simplified by the conditional independence assertions. Computing with Probabilities: Law of Total Probability Law of Total Probability (aka “summing out” or marginalization) P(a) = Σb P(a, b) = Σb P(a | b) P(b) where B is any random variable Why is this useful? given a joint distribution (e.g., P(a,b,c,d)) we can obtain any “marginal” probability (e.g., P(b)) by summing out the other variables, e.g., P(b) = Σa Σc Σd P(a, b, c, d) Less obvious: we can also compute any conditional probability of interest given a joint distribution, e.g., P(c | b) = Σa Σd P(a, c, d | b) = (1 / P(b)) Σa Σd P(a, c, d, b) where (1 / P(b)) is just a normalization constant Thus, the joint distribution contains the information we need to compute any probability of interest. Computing with Probabilities: The Chain Rule or Factoring We can always write P(a, b, c, … z) = P(a | b, c, …. -
Deep Regression Bayesian Network and Its Applications Siqi Nie, Meng Zheng, Qiang Ji Rensselaer Polytechnic Institute
1 Deep Regression Bayesian Network and Its Applications Siqi Nie, Meng Zheng, Qiang Ji Rensselaer Polytechnic Institute Abstract Deep directed generative models have attracted much attention recently due to their generative modeling nature and powerful data representation ability. In this paper, we review different structures of deep directed generative models and the learning and inference algorithms associated with the structures. We focus on a specific structure that consists of layers of Bayesian Networks due to the property of capturing inherent and rich dependencies among latent variables. The major difficulty of learning and inference with deep directed models with many latent variables is the intractable inference due to the dependencies among the latent variables and the exponential number of latent variable configurations. Current solutions use variational methods often through an auxiliary network to approximate the posterior probability inference. In contrast, inference can also be performed directly without using any auxiliary network to maximally preserve the dependencies among the latent variables. Specifically, by exploiting the sparse representation with the latent space, max-max instead of max-sum operation can be used to overcome the exponential number of latent configurations. Furthermore, the max-max operation and augmented coordinate ascent are applied to both supervised and unsupervised learning as well as to various inference. Quantitative evaluations on benchmark datasets of different models are given for both data representation and feature learning tasks. I. INTRODUCTION Deep learning has become a major enabling technology for computer vision. By exploiting its multi-level representation and the availability of the big data, deep learning has led to dramatic performance improvements for certain tasks. -
A Widely Applicable Bayesian Information Criterion
JournalofMachineLearningResearch14(2013)867-897 Submitted 8/12; Revised 2/13; Published 3/13 A Widely Applicable Bayesian Information Criterion Sumio Watanabe [email protected] Department of Computational Intelligence and Systems Science Tokyo Institute of Technology Mailbox G5-19, 4259 Nagatsuta, Midori-ku Yokohama, Japan 226-8502 Editor: Manfred Opper Abstract A statistical model or a learning machine is called regular if the map taking a parameter to a prob- ability distribution is one-to-one and if its Fisher information matrix is always positive definite. If otherwise, it is called singular. In regular statistical models, the Bayes free energy, which is defined by the minus logarithm of Bayes marginal likelihood, can be asymptotically approximated by the Schwarz Bayes information criterion (BIC), whereas in singular models such approximation does not hold. Recently, it was proved that the Bayes free energy of a singular model is asymptotically given by a generalized formula using a birational invariant, the real log canonical threshold (RLCT), instead of half the number of parameters in BIC. Theoretical values of RLCTs in several statistical models are now being discovered based on algebraic geometrical methodology. However, it has been difficult to estimate the Bayes free energy using only training samples, because an RLCT depends on an unknown true distribution. In the present paper, we define a widely applicable Bayesian information criterion (WBIC) by the average log likelihood function over the posterior distribution with the inverse temperature 1/logn, where n is the number of training samples. We mathematically prove that WBIC has the same asymptotic expansion as the Bayes free energy, even if a statistical model is singular for or unrealizable by a statistical model. -
Recco® Detectors Worldwide
RECCO® DETECTORS WORLDWIDE ANDORRA Krimml, Salzburg Aflenz, ÖBRD Steiermark Krippenstein/Obertraun, Aigen im Ennstal, ÖBRD Steiermark Arcalis Oberösterreich Alpbach, ÖBRD Tirol Arinsal Kössen, Tirol Althofen-Hemmaland, ÖBRD Grau Roig Lech, Tirol Kärnten Pas de la Casa Leogang, Salzburg Altausee, ÖBRD Steiermark Soldeu Loser-Sandling, Steiermark Altenmarkt, ÖBRD Salzburg Mayrhofen (Zillertal), Tirol Axams, ÖBRD Tirol HELICOPTER BASES & SAR Mellau, Vorarlberg Bad Hofgastein, ÖBRD Salzburg BOMBERS Murau/Kreischberg, Steiermark Bischofshofen, ÖBRD Salzburg Andorra La Vella Mölltaler Gletscher, Kärnten Bludenz, ÖBRD Vorarlberg Nassfeld-Hermagor, Kärnten Eisenerz, ÖBRD Steiermark ARGENTINA Nauders am Reschenpass, Tirol Flachau, ÖBRD Salzburg Bariloche Nordkette Innsbruck, Tirol Fragant, ÖBRD Kärnten La Hoya Obergurgl/Hochgurgl, Tirol Fulpmes/Schlick, ÖBRD Tirol Las Lenas Pitztaler Gletscher-Riffelsee, Tirol Fusch, ÖBRD Salzburg Penitentes Planneralm, Steiermark Galtür, ÖBRD Tirol Präbichl, Steiermark Gaschurn, ÖBRD Vorarlberg AUSTRALIA Rauris, Salzburg Gesäuse, Admont, ÖBRD Steiermark Riesneralm, Steiermark Golling, ÖBRD Salzburg Mount Hotham, Victoria Saalbach-Hinterglemm, Salzburg Gries/Sellrain, ÖBRD Tirol Scheffau-Wilder Kaiser, Tirol Gröbming, ÖBRD Steiermark Schiarena Präbichl, Steiermark Heiligenblut, ÖBRD Kärnten AUSTRIA Schladming, Steiermark Judenburg, ÖBRD Steiermark Aberg Maria Alm, Salzburg Schoppernau, Vorarlberg Kaltenbach Hochzillertal, ÖBRD Tirol Achenkirch Christlum, Tirol Schönberg-Lachtal, Steiermark Kaprun, ÖBRD Salzburg -
41 EMPLOYMENT and REGIONAL DEVELOPMENT in ITALY GUISAN, M. Carmen ([email protected]) AGUAYO, Eva ([email protected] University of Sa
Applied Econometrics and International Development. AEEADE. Vol. 2-1 (2002) EMPLOYMENT AND REGIONAL DEVELOPMENT IN ITALY GUISAN, M. Carmen ([email protected]) AGUAYO, Eva ([email protected] University of Santiago de Compostela (Spain) Abstract We present an interregional econometric model for Value- Added and Employment in 20 Italian regions, which has into account the effects of several factors of development such as industry, tourism and public sector activities. We also analyse the evolution of employment in Italy during the period 1960-2000, in comparison with EU, as well as the regional distribution of employment and development by sector in the period 1985-98. The main conclusions point to the convenience of fostering the rate of employment, which is below EU average and shows an stagnation in comparison with Ireland and other EU countries, specially in the less industrialized regions. This article is part of a research project on regional economics of EU countries. JEL classification: C5, C51, E24, J2, O18, O52, R23 Key words: Employment in Italy, Italian Regional Development, Regional Econometric Models, European Regions, Regional Tourism 1. Introduction Although Italy has experienced a high increase of non- agrarian employment and development during the 20th century, and has a level of Income per capita very similar to European Union average, the country has experience, as well as France, Spain, and another countries with a high level of agrarian activity at the middle of that century, an important reduction in agrarian employment. 41 Guisan, M.C. and Aguayo, E. Employment and Regional Development in Italy As a consequence of the diminution of agrarian employment and other features of Italian economy, regional employment rates vary among Northern and Southern regions, and the Italian economy as a whole has an average rate of total employment per one thousand inhabitants below EU average. -
Sacred Places Europe: 108 Destinations
Reviews from Sacred Places Around the World “… the ruins, mountains, sanctuaries, lost cities, and pilgrimage routes held sacred around the world.” (Book Passage 1/2000) “For each site, Brad Olsen provides historical background, a description of the site and its special features, and directions for getting there.” (Theology Digest Summer, 2000) “(Readers) will thrill to the wonderful history and the vibrations of the world’s sacred healing places.” (East & West 2/2000) “Sites that emanate the energy of sacred spots.” (The Sunday Times 1/2000) “Sacred sites (to) the ruins, sanctuaries, mountains, lost cities, temples, and pilgrimage routes of ancient civilizations.” (San Francisco Chronicle 1/2000) “Many sacred places are now bustling tourist and pilgrimage desti- nations. But no crowd or souvenir shop can stand in the way of a traveler with great intentions and zero expectations.” (Spirituality & Health Summer, 2000) “Unleash your imagination by going on a mystical journey. Brad Olsen gives his take on some of the most amazing and unexplained spots on the globe — including the underwater ruins of Bimini, which seems to point the way to the Lost City of Atlantis. You can choose to take an armchair pilgrimage (the book is a fascinating read) or follow his tips on how to travel to these powerful sites yourself.” (Mode 7/2000) “Should you be inspired to make a pilgrimage of your own, you might want to pick up a copy of Brad Olsen’s guide to the world’s sacred places. Olsen’s marvelous drawings and mysterious maps enhance a package that is as bizarre as it is wonderfully acces- sible.