Congenital Ectrodactyly and Its Genetic Linkage
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Analysis of Polycomb Repressive Complexes Binding Dynamics During Limb Development Reveals the Prevalence of PRC2-Independent PRC1 Occupancy
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.21.306688; this version posted September 21, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Analysis of Polycomb Repressive Complexes binding dynamics during limb development reveals the prevalence of PRC2-independent PRC1 occupancy Claudia Gentile1,2,#, Alexandre Mayran3,~, Fanny Guerard-Millet1, and Marie Kmita1,2,4,5* 1Genetics and Development Research Unit, Institut de Recherches Cliniques de Montréal, Montréal, Québec, Canada. 2Department of Experimental Medicine, McGill University, Montréal, Québec, Canada 3Molecular Genetics Research Unit, Institut de Recherches Cliniques de Montréal, Montréal, Québec, Canada 4Department of Medicine, Université de Montréal, Montreal, Quebec, Canada 5Lead Contact #Present address: Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02215, USA ~Present address: School of Life Sciences, Federal Institute of Technology, Lausanne, Lausanne 1015, Switzerland *Corresponding author: Marie Kmita Email: [email protected] Tel: (1) 514-987-5749 bioRxiv preprint doi: https://doi.org/10.1101/2020.09.21.306688; this version posted September 21, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract The Polycomb group (PcG) proteins are key players in the regulation of tissue-specific gene expression through their known ability to epigenetically silence developmental genes. The PcG proteins form two multicomponent complexes, Polycomb Repressive Complex 1 and 2 (PRC1 and PRC2), whereby the hierarchical model of recruitment postulates that PRC2 triggers the trimethylation of Histone H3 lysine 27 (H3K27me3) leading to the recruitment of PRC1. -
SUPPLEMENTARY MATERIAL Bone Morphogenetic Protein 4 Promotes
www.intjdevbiol.com doi: 10.1387/ijdb.160040mk SUPPLEMENTARY MATERIAL corresponding to: Bone morphogenetic protein 4 promotes craniofacial neural crest induction from human pluripotent stem cells SUMIYO MIMURA, MIKA SUGA, KAORI OKADA, MASAKI KINEHARA, HIROKI NIKAWA and MIHO K. FURUE* *Address correspondence to: Miho Kusuda Furue. Laboratory of Stem Cell Cultures, National Institutes of Biomedical Innovation, Health and Nutrition, 7-6-8, Saito-Asagi, Ibaraki, Osaka 567-0085, Japan. Tel: 81-72-641-9819. Fax: 81-72-641-9812. E-mail: [email protected] Full text for this paper is available at: http://dx.doi.org/10.1387/ijdb.160040mk TABLE S1 PRIMER LIST FOR QRT-PCR Gene forward reverse AP2α AATTTCTCAACCGACAACATT ATCTGTTTTGTAGCCAGGAGC CDX2 CTGGAGCTGGAGAAGGAGTTTC ATTTTAACCTGCCTCTCAGAGAGC DLX1 AGTTTGCAGTTGCAGGCTTT CCCTGCTTCATCAGCTTCTT FOXD3 CAGCGGTTCGGCGGGAGG TGAGTGAGAGGTTGTGGCGGATG GAPDH CAAAGTTGTCATGGATGACC CCATGGAGAAGGCTGGGG MSX1 GGATCAGACTTCGGAGAGTGAACT GCCTTCCCTTTAACCCTCACA NANOG TGAACCTCAGCTACAAACAG TGGTGGTAGGAAGAGTAAAG OCT4 GACAGGGGGAGGGGAGGAGCTAGG CTTCCCTCCAACCAGTTGCCCCAAA PAX3 TTGCAATGGCCTCTCAC AGGGGAGAGCGCGTAATC PAX6 GTCCATCTTTGCTTGGGAAA TAGCCAGGTTGCGAAGAACT p75 TCATCCCTGTCTATTGCTCCA TGTTCTGCTTGCAGCTGTTC SOX9 AATGGAGCAGCGAAATCAAC CAGAGAGATTTAGCACACTGATC SOX10 GACCAGTACCCGCACCTG CGCTTGTCACTTTCGTTCAG Suppl. Fig. S1. Comparison of the gene expression profiles of the ES cells and the cells induced by NC and NC-B condition. Scatter plots compares the normalized expression of every gene on the array (refer to Table S3). The central line -
A Narrative Review of Poland's Syndrome
Review Article A narrative review of Poland’s syndrome: theories of its genesis, evolution and its diagnosis and treatment Eman Awadh Abduladheem Hashim1,2^, Bin Huey Quek1,3,4^, Suresh Chandran1,3,4,5^ 1Department of Neonatology, KK Women’s and Children’s Hospital, Singapore, Singapore; 2Department of Neonatology, Salmanya Medical Complex, Manama, Kingdom of Bahrain; 3Department of Neonatology, Duke-NUS Medical School, Singapore, Singapore; 4Department of Neonatology, NUS Yong Loo Lin School of Medicine, Singapore, Singapore; 5Department of Neonatology, NTU Lee Kong Chian School of Medicine, Singapore, Singapore Contributions: (I) Conception and design: EAA Hashim, S Chandran; (II) Administrative support: S Chandran, BH Quek; (III) Provision of study materials: EAA Hashim, S Chandran; (IV) Collection and assembly: All authors; (V) Data analysis and interpretation: BH Quek, S Chandran; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors. Correspondence to: A/Prof. Suresh Chandran. Senior Consultant, Department of Neonatology, KK Women’s and Children’s Hospital, Singapore 229899, Singapore. Email: [email protected]. Abstract: Poland’s syndrome (PS) is a rare musculoskeletal congenital anomaly with a wide spectrum of presentations. It is typically characterized by hypoplasia or aplasia of pectoral muscles, mammary hypoplasia and variably associated ipsilateral limb anomalies. Limb defects can vary in severity, ranging from syndactyly to phocomelia. Most cases are sporadic but familial cases with intrafamilial variability have been reported. Several theories have been proposed regarding the genesis of PS. Vascular disruption theory, “the subclavian artery supply disruption sequence” (SASDS) remains the most accepted pathogenic mechanism. Clinical presentations can vary in severity from syndactyly to phocomelia in the limbs and in the thorax, rib defects to severe chest wall anomalies with impaired lung function. -
TP63-Mutation As a Cause of Prenatal Lethal Multicystic Dysplastic Kidneys
Western University Scholarship@Western Paediatrics Publications Paediatrics Department 11-1-2020 TP63-mutation as a cause of prenatal lethal multicystic dysplastic kidneys Isabel Friedmann Carla Campagnolo Nancy Chan Ghislain Hardy Maha Saleh Follow this and additional works at: https://ir.lib.uwo.ca/paedpub Part of the Pediatrics Commons Received: 28 April 2020 | Revised: 8 August 2020 | Accepted: 10 August 2020 DOI: 10.1002/mgg3.1486 CLINICAL REPORT TP63-mutation as a cause of prenatal lethal multicystic dysplastic kidneys Isabel Friedmann1 | Carla Campagnolo2 | Nancy Chan1,3 | Ghislain Hardy1,4 | Maha Saleh1,2 1Schulich School of Medicine and Dentistry, University of Western Ontario, Abstract London, ON, Canada Background: Ectrodactyly-ectodermal dysplasia-clefting syndrome 3 (EEC) is 2Division of Genetics and Metabolism, one of the six overlapping syndromes caused by mutations in the tumor protein p63 Department of Paediatrics, London Health gene (TP63). EEC is suspected when patients have cleft hands or feet, polydactyly, Sciences Centre, London, ON, Canada 3 and syndactyly, abnormal development of the ectodermally derived structures, and Department of Pathology, London Health Sciences Centre, London, ON, Canada orofacial clefting. Genitourinary (GU) anomalies have been identified in patients 4Department of Obstetrics and Gynecology, with EEC, yet these are often under-recognized and under-reported. The available London Health Sciences Centre, London, literature on sonographic prenatal findings is sparse, especially when considering ON, Canada GU anomalies. Correspondence Methods: We present the case of a male stillborn fetus, who was found antenatally to Isabel Friedmann, University of Western have multicystic dysplastic kidneys and anhydramnios. Following the termination of Ontario, Schulich School of Medicine and Dentistry, London, Ontario, Canada. -
Holoprosencephaly and Preaxial Polydactyly Associated with a 1.24 Mb Duplication Encompassing FBXW11 at 5Q35.1
J Hum Genet (2006) 51:721–726 DOI 10.1007/s10038-006-0010-8 SHORT COMMUNICATION Holoprosencephaly and preaxial polydactyly associated with a 1.24 Mb duplication encompassing FBXW11 at 5q35.1 David A. Koolen Æ Jos Herbergs Æ Joris A. Veltman Æ Rolph Pfundt Æ Hans van Bokhoven Æ Hans Stroink Æ Erik A. Sistermans Æ Han G. Brunner Æ Ad Geurts van Kessel Æ Bert B. A. de Vries Received: 22 March 2006 / Accepted: 2 May 2006 / Published online: 25 July 2006 Ó The Japan Society of Human Genetics and Springer-Verlag 2006 Abstract Holoprosencephaly (HPE) is the most gion encompasses seven genes: RANBP17, TLX3, common developmental defect affecting the forebrain NPM1, FGF18, FBXW11, STK10, and DC-UbP. Since and midface in humans. The aetiology of HPE is highly FBXW11 is relatively highly expressed in fetal brain heterogeneous and includes both environmental and and is directly involved in proteolytic processing of genetic factors. Here we report on a boy with mild GLI3, we propose FBXW11 as the most likely candi- mental retardation, lobar HPE, epilepsy, mild pyra- date gene for the HPE and prexial polydactyly phe- midal syndrome of the legs, ventricular septal defect, notype. Additional research is needed to further vesicoureteral reflux, preaxial polydactyly, and facial establish the role of genes from the 5q35.1 region in dysmorphisms. Genome-wide tiling path resolution brain and limb development and to determine the array based comparative genomic hybridisation (array prevalence of copy number gain in the 5q35.1 region CGH) revealed a de novo copy-number gain at 5q35.1 among HPE patients. -
Prenatal Ultrasonography of Craniofacial Abnormalities
Prenatal ultrasonography of craniofacial abnormalities Annisa Shui Lam Mak, Kwok Yin Leung Department of Obstetrics and Gynaecology, Queen Elizabeth Hospital, Hong Kong SAR, China REVIEW ARTICLE https://doi.org/10.14366/usg.18031 pISSN: 2288-5919 • eISSN: 2288-5943 Ultrasonography 2019;38:13-24 Craniofacial abnormalities are common. It is important to examine the fetal face and skull during prenatal ultrasound examinations because abnormalities of these structures may indicate the presence of other, more subtle anomalies, syndromes, chromosomal abnormalities, or even rarer conditions, such as infections or metabolic disorders. The prenatal diagnosis of craniofacial abnormalities remains difficult, especially in the first trimester. A systematic approach to the fetal Received: May 29, 2018 skull and face can increase the detection rate. When an abnormality is found, it is important Revised: June 30, 2018 to perform a detailed scan to determine its severity and search for additional abnormalities. Accepted: July 3, 2018 Correspondence to: The use of 3-/4-dimensional ultrasound may be useful in the assessment of cleft palate and Kwok Yin Leung, MBBS, MD, FRCOG, craniosynostosis. Fetal magnetic resonance imaging can facilitate the evaluation of the palate, Cert HKCOG (MFM), Department of micrognathia, cranial sutures, brain, and other fetal structures. Invasive prenatal diagnostic Obstetrics and Gynaecology, Queen Elizabeth Hospital, Gascoigne Road, techniques are indicated to exclude chromosomal abnormalities. Molecular analysis for some Kowloon, Hong Kong SAR, China syndromes is feasible if the family history is suggestive. Tel. +852-3506 6398 Fax. +852-2384 5834 E-mail: [email protected] Keywords: Craniofacial; Prenatal; Ultrasound; Three-dimensional ultrasonography; Fetal structural abnormalities This is an Open Access article distributed under the Introduction terms of the Creative Commons Attribution Non- Commercial License (http://creativecommons.org/ licenses/by-nc/3.0/) which permits unrestricted non- Craniofacial abnormalities are common. -
Blueprint Genetics Comprehensive Skeletal Dysplasias and Disorders
Comprehensive Skeletal Dysplasias and Disorders Panel Test code: MA3301 Is a 251 gene panel that includes assessment of non-coding variants. Is ideal for patients with a clinical suspicion of disorders involving the skeletal system. About Comprehensive Skeletal Dysplasias and Disorders This panel covers a broad spectrum of skeletal disorders including common and rare skeletal dysplasias (eg. achondroplasia, COL2A1 related dysplasias, diastrophic dysplasia, various types of spondylo-metaphyseal dysplasias), various ciliopathies with skeletal involvement (eg. short rib-polydactylies, asphyxiating thoracic dysplasia dysplasias and Ellis-van Creveld syndrome), various subtypes of osteogenesis imperfecta, campomelic dysplasia, slender bone dysplasias, dysplasias with multiple joint dislocations, chondrodysplasia punctata group of disorders, neonatal osteosclerotic dysplasias, osteopetrosis and related disorders, abnormal mineralization group of disorders (eg hypopohosphatasia), osteolysis group of disorders, disorders with disorganized development of skeletal components, overgrowth syndromes with skeletal involvement, craniosynostosis syndromes, dysostoses with predominant craniofacial involvement, dysostoses with predominant vertebral involvement, patellar dysostoses, brachydactylies, some disorders with limb hypoplasia-reduction defects, ectrodactyly with and without other manifestations, polydactyly-syndactyly-triphalangism group of disorders, and disorders with defects in joint formation and synostoses. Availability 4 weeks Gene Set Description -
© Copyrighted Material by PRO-ED, Inc
Quick Reference Guide This index may help determine a clinical diagnosis. Fairly common dysmorphic features are listed with corresponding syndromes in which the characteristic is a frequent find ing. The syndrome features are arranged under the following anatomical categories: • Central Nervous Systetnl xv Mental Deficiency .. xv • Skull xvi • Face xvi • Eyes xvi xvi xvi xvii • xvii Inc. xvii • Ears '···>CentraINervousSystem/MentaIDeficieney· PRO-ED, Bardet-Biedl Syndrome 113 by Cornelia de Lange Syndrome 198 Down Syndrome 28 Fetal Alcohol Spectrum Disorder 222 Fetal Cytomegalovirus Syndrome 227material Fetal Rubella Syndrome 232 Fragile X Syndrome 158 Mucopolysaccharidoses Syndromes (MPS) 121 Noonan Syndrome 78 Prader-Willi Syndrome 214 Refsum Disease copyrighted137 © Apert Syndrome 47 Cornelia de Lange Syndrome 198 Crouzon Syndrome 58 Down Syndrome 28 xi xii Quick Reference Guide Asymmetry Goldenhar Syndrome 203 Treacher Collins Syndrome 95 Facial Palsy Moebius Syndrome 209 Flat Apert Syndrome 47 Crouzon Syndrome 58 Down Syndrome 28 Stickler Syndrome 90 Anteverted Nares Cornelia de Lange Syndrome 198 Fetal Alcohol Spectrum Disorder 222 Broad Nasal Tip Inc. Oro-Facial-Digital Syndrome Type II 129 Downturned Upper Lip Cornelia de Lange Syndrome 198 Midface Hypoplasia PRO-ED, Fetal Alcohol Spectrum Disorder 222 by Confluent Eyebrows Cornelia de Lange Syndrome 198 Coarse Facial Features Mucopolysaccharidoses Syndromes 121 material Eyes Bardet-Biedl Syndrome (retinitis pigmentosa) 113 Fetal Cytomegalovirus Syndrome (chorioretinitis) 227 -
Four Unusual Cases of Congenital Forelimb Malformations in Dogs
animals Article Four Unusual Cases of Congenital Forelimb Malformations in Dogs Simona Di Pietro 1 , Giuseppe Santi Rapisarda 2, Luca Cicero 3,* , Vito Angileri 4, Simona Morabito 5, Giovanni Cassata 3 and Francesco Macrì 1 1 Department of Veterinary Sciences, University of Messina, Viale Palatucci, 98168 Messina, Italy; [email protected] (S.D.P.); [email protected] (F.M.) 2 Department of Veterinary Prevention, Provincial Health Authority of Catania, 95030 Gravina di Catania, Italy; [email protected] 3 Institute Zooprofilattico Sperimentale of Sicily, Via G. Marinuzzi, 3, 90129 Palermo, Italy; [email protected] 4 Veterinary Practitioner, 91025 Marsala, Italy; [email protected] 5 Ospedale Veterinario I Portoni Rossi, Via Roma, 57/a, 40069 Zola Predosa (BO), Italy; [email protected] * Correspondence: [email protected] Simple Summary: Congenital limb defects are sporadically encountered in dogs during normal clinical practice. Literature concerning their diagnosis and management in canine species is poor. Sometimes, the diagnosis and description of congenital limb abnormalities are complicated by the concurrent presence of different malformations in the same limb and the lack of widely accepted classification schemes. In order to improve the knowledge about congenital limb anomalies in dogs, this report describes the clinical and radiographic findings in four dogs affected by unusual congenital forelimb defects, underlying also the importance of reviewing current terminology. Citation: Di Pietro, S.; Rapisarda, G.S.; Cicero, L.; Angileri, V.; Morabito, Abstract: Four dogs were presented with thoracic limb deformity. After clinical and radiographic S.; Cassata, G.; Macrì, F. Four Unusual examinations, a diagnosis of congenital malformations was performed for each of them. -
A Novel Role for Lbx1 in Xenopus Hypaxial Myogenesis
RESEARCH ARTICLE 195 Development 133, 195-208 doi:10.1242/dev.02183 A novel role for lbx1 in Xenopus hypaxial myogenesis Benjamin L. Martin and Richard M. Harland* We have examined lbx1 expression in early X. laevis tadpoles. In contrast to amniotes, lbx1 is expressed in all of the myoblasts that contribute to the body wall musculature, as well as in a group of cells that migrate into the head. Despite this different expression, the function of lbx1 appears to be conserved. Morpholino (MO) knockdown of lbx1 causes a specific reduction of body wall muscles and hypoglossal muscles originating from the somites. Although myoblast migratory defects are observed in antisense MO injected tadpoles targeting lbx1, this results at least in part from a lack of myoblast proliferation in the hypaxial muscle domain. Conversely, overexpression of lbx1 mRNA results in enlarged somites, an increase in cell proliferation, but a lack of differentiated muscle. The control of cell proliferation is linked to a strong downregulation of myoD expression in gain-of-function experiments. Co-injection of myoD mRNA with lbx1 mRNA eliminates the overproliferation phenotype observed when lbx1 is injected alone. The results indicate that a primary function of lbx1 in hypaxial muscle development is to repress myoD, allowing myoblasts to proliferate before the eventual onset of terminal differentiation. KEY WORDS: Hypaxial, Rectus abdominus, Rectus cervicus, Geniohyoideus, lbx1, myoD, myf5, Xenopus laevis, Cell proliferation, Myogenesis INTRODUCTION The expression of myf5, a muscle regulatory factor (MRF), is similar The ladybird homeobox (lbx1) gene is a member of the NK-class of to that of pax3 in the hypaxial myoblasts. -
Early Onset Asymmetrical Intrauterine Growth Retardation with Fetal
1of3 ELECTRONIC LETTER J Med Genet: first published as 10.1136/jmg.40.1.e1 on 1 January 2003. Downloaded from Early onset asymmetrical intrauterine growth retardation with fetal hypokinesia and variable expression of acral and genitourinary malformations: a new lethal MCA syndrome I Witters, P Moerman, F A Van Assche, J-P Fryns ............................................................................................................................. J Med Genet 2003;40:e1(http://www.jmedgenet.com/cgi/content/full/40/1/e1) e report four sibs, two males and two females, with Key points severe and early onset asymmetrical intrauterine Wgrowth retardation (IUGR) with a disproportionally large head and a fetal akinesia deformation sequence. Neuro- • We present four sibs with a MCA syndrome character- muscular studies were normal in the four sibs. Variable acral ised by servere, early onset asymmetrical growth retar- malformations (bilateral cleft hand in one male, proximal dation, fetal hypokinesia, variable acral malformations, syndactyly of the toes (right II-III; left II-III/IV-V) in the other and variable genitourinary malformations. male) and genitourinary malformations (Rokitansky se- quence in one female, renal hypoplasia/dysplasia in one male and one female, cryptorchidism in the males) were present. The spectrum of malformations seen in these four sibs dominated by severe asymmetrical IUGR with fetal hypoki- nesia and early lethality provides evidence for the existence of a new MCA syndrome with apparent autosomal recessive inheritance. CASE REPORTS The parents of the four sibs described in this report are non-consanguineous, healthy Europeans. Two other pregnan- cies had ended with a first trimester miscarriage. They also have two healthy daughters. http://jmg.bmj.com/ The first sib was a male newborn, who died a few minutes after birth at 35 weeks gestation. -
Association of Ectodermal Dysplasia, Ectrodactyly, and Macular Dystrophy: the EEM Syndrome
J Med Genet: first published as 10.1136/jmg.20.1.52 on 1 February 1983. Downloaded from Journal ofMedical Genetics, 1983, 20, 52-57 Association of ectodermal dysplasia, ectrodactyly, and macular dystrophy: the EEM syndrome SHOZO OHDO, KIYOTAKE HIRAYAMA, AND TAMOTSU TERAWAKI From the Department ofPediatrics, Miyazaki Medical College; the Department ofPediatrics, Faculty ofMedicine, Ryukyu University; andthe Department ofPediatrics, Faculty ofMedicine, Kagoshima University, Japan. SUMMARY We report five patients with ectodermal dysplasia, ectrodactyly associated with syndactyly or cleft hand or both, and, in addition, macular dystrophy which was presumed to be progressive, in an isolated population on a remote island in Japan. The heredity of this syndrome was thought to be autosomal recessive. Three cases have been reported so far with a combination of the same abnor- malities. The parents in these cases were consanguineous.' 2 Among the syndromes of ectodermal dysplasia we first examined her. Her parents were first cousins associated with malformations of the extremities, and had no signs of ectrodactyly or ectodermal there are Roberts's syndrome,' EEC syndrome,4 the dysplasia. Her two sibs were healthy. syndrome reported by Robinson et al,5 the syndrome On physical examination, her hair was very sparse, reported by Freire-Maia,6 and the syndrome reported thin, and short and the eyebrows and eyelashes werecopyright. by Bowen and Armstrong.7 However, these also sparse and thin (fig 2). Her teeth were small and syndromes clearly differ from the syndrome described widely spaced, numbering 25 in all. Cardiac murmur in this paper, because they lack the characteristic was not heard.