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From Bench to Bountiful Harvests- Annual Report of the Mulltinational From Bench to Bountiful Harvests Multinational Arabidopsis Steering Committee (MASC) Annual Report 2020/2021 Design and editing Geraint Parry MASC Secretary, Arabidopsis Events UK https://www.arabidopsisevents.uk/ [email protected] Cover images taken from Open Access publications Top: Pipitone et al (2021) Elife https://elifesciences.org/articles/62709 Middle: Truskina et al (2021): Nature https://www.nature.com/articles/s41586-020-2940-2 Bottom left: Gong et al (2021) Elife https://elifesciences.org/articles/63335 Bottom right: Borg et al (2021):Elife https://elifesciences.org/articles/61894 Further information can be found on the MASC website: www.Arabidopsisresearch.org The MASC report 2020/21 and previous reports are available online at: > MASC, The Multinational Arabidopsis Steering Committee: http://Arabidopsisresearch.org/index.php/publications/masc-reports > uNASC, The Nottingham Arabidopsis Stock Centre: http://Arabidopsis.info/progreports.html > TAIR, The Arabidopsis Information Resource: http://www.Arabidopsis.org/portals/masc/masc_docs/masc_reports.jsp > GARNet http://garnetcommunity.org.uk/reports Published by the Multinational Arabidopsis Steering Committee (MASC) June 2021 MASC Inc is registered as a not-for-profit corporation in Canada under Corporatation Number 960778-1, subject to the regulations of the Canada Not-for-profit Corporations Act Acknowledgements MASC is grateful to all authors for their contribution to the MASC annual report 2020/2021. This report has been written by the members of the MASC community including the MASC directors, subcommittee chairs and co-chairs with support of subcommittee members, country representatives, project or resource directors and the wider Arabidopsis community. Throughout the report any references that are highlighted in red include an associated open access figure from that article. 2 MASC Annual Report 2020/2021 MASC Annual Report 2020/2021 3 MASC Country Representatives Israel Assaf Mosquna [email protected] The Multinational Arabidopsis Argentina Gabriela Auge [email protected] Italy Maura Cardarelli [email protected] Steering Committee Australia Monika Murcha [email protected] Japan Masatomo Kobayashi [email protected] Proteomics Austria Minami Matsui [email protected] Annual Report 2020/2021 Joshua Heazlewood [email protected] Marie-Theres Hauser [email protected] Motoaki Seki [email protected] MASC President Systems and Synthetic Biology Belgium New Zealand Nicholas Provart Siobhan Brady [email protected] Moritz K. Nowack [email protected] Lynette Brownfield [email protected] [email protected] Brazil Norway MASC Treasurer MASC Project Resource Contacts Wagner Araújo Thorsten Hamann [email protected] Siobhan Brady [email protected] Adriano Nunes-Nesi [email protected] [email protected] ABRC Poland David Somers [email protected] Canada Robert Malinowski [email protected] MASC Secretary Emma Knee [email protected] Dario Bonetta Geraint Parry [email protected] Saudi Arabia [email protected] BAR Chile Yunhe Jiang [email protected] Nicholas Provart [email protected] Adrian A. Moreno [email protected] MASC Directors Singapore Global Plant Council China Eunyoung Chae [email protected] Rodrigo A. Gutiérrez [email protected] Isabel Mendoza [email protected] Yuling Jiao Elizabeth Haswell [email protected] [email protected] South Korea Yuling Jiao [email protected] Gramene Czech Republic Inhwan Hwang [email protected] Masatomo Kobayashi [email protected] Marcela Karey Tello-Ruiz [email protected] Sean May [email protected] Viktor Žárský [email protected] Blake Meyers [email protected] NASC Spain Denmark Shahid Mukhtar [email protected] Sean May [email protected] Cristina Ferrandiz [email protected] Xuelu Wang [email protected] Michael Palmgren [email protected] Phenotyping Resources Sweden Estonia Roland Pieruschka [email protected] Maria E. Erikssonv [email protected] MASC Subcommittee Contacts Hanna Hõrak [email protected] RIKEN Switzerland Finland Bioinformatics Masatomo Kobayashi [email protected] Misako Yamazaki [email protected] Ari Pekka Mahonen [email protected] Nicholas Provart [email protected] Kentaro K. Shimizu [email protected] TAIR France Clone-based ORFeomics Leonore Reiser [email protected] Taiwan Loic Lepiniec [email protected] Joe Ecker [email protected] Cheng-Hsun Ho [email protected] Motoaki Seki [email protected] Catherine Perrot- Rechenmann [email protected] Turkey Epigenetics and Epigenomes Baris Uzilday [email protected] Robert Schmitz [email protected] Germany Klaus Harter [email protected] Xuehua Zhong [email protected] United Kingdom Geraint Parry [email protected] Metabolomics Greece Stamatis Rigas [email protected] Wolfram Weckwerth [email protected] United States of America Takayuki Tohge [email protected] Joanna D. Friesner [email protected] India Natural Varation and Comparative Genomics Jitendra P. Khurana [email protected] J. Chris Pires [email protected] Ramamurthy Srinivasan [email protected] Ya-Long Guo [email protected] Ireland Plant Immunity Charles Spillane [email protected] Shahid Mukhtar [email protected] 4 MASC Annual Report 2020/2021 MASC Annual Report 2020/2021 5 Table of Contents Activities of MASC MASC web page: www.Arabidopsisresearch.org - Serving as executive secretary of MASC Table of Contents 6 - Collating, writing and editing of the annual MASC MASC Inc is incorporated as a not-for-profit in progress report with input from MASC members Canada. This requires the official positions of President, - Maintaining and updating the MASC web pages to Activities of MASC 7 Treasurer and Secretary, the current incumbents are inform the global research community about various Nicholas Provart, Siobhan Brady and Geraint Parry opportunities, collaborations, large-scale activities and respectively. research progress Current Community Status 10 - Organising the MASC annual meeting during ICAR In 2017 eight directors were elected for a range of meetings term lengths. These terms will be for four years once the Reports from the MASC Subcommittees 12 first round of rotations has ended. These directors officially MASC operates through three groups who receive took up their positions at the MASC annual meeting that continuous input from the Arabidopsis community: MASC took place at ICAR2018 in Turku, Finland. To ensure that subcommittees, Arabidopsis community projects and Reports from Arabidopsis Community Projects and Resources 31 only two directors rotate off the board the initial term resources and MASC country representatives. lengths will be less than 4 years. The MASC subcommittees, proposed in Update on Arabidopsis Publications 48 In 2020 Michael Wrzaczek and Barry Pogson 2002, were established to help tracking the progress rotated off the list of directors and we thank them for and advances made by the international Arabidopsis their service. The membership of MASC (comprising the community. This report includes contributions from Country Reports 50 members of MASC subcommittees, MASC projects and seven subcommittees: Bioinformatics, Epigenetics country representatives) nominated and elected two new and Epigenomes, ORFeomics, Natural Variation and directors; Shahid Mukhtar (The University of Alabama at Comparative Genomics, Proteomics, Plant Immunity Birmingham) and Yuling Jiao (Institute of Genetics and and Systems and Synthetic Biology. This will be the final Members of the MASC Subcommittees 118 Developmental Biology, Chinese Academy of Sciences) report of the ORFeomics subcommittee so we thank who will serve as directors until 2024. Motoaki Seki and Joe Ecker for all their work on this over the past decade. This is a current list of the MASC board of directors and the length of their terms: Subcommittees have loose guidelines for their activities: - 2018-2021: Xuelu Wang (China), Elizabeth Haswell - Subcommittee chairs are usually required a hold a (United States of America) 3-year minimum term to provide continuity - 2018-2022: Blake Meyers (United States of America), - Chair/co-chair should confirm and represent the interests Sean May (United Kingdom) of subcommittee members - 2018-2023: Rodrigo Gutierrez (Chile), Masatomo - Submission of an annual report Kobayashi (Japan) - Input at MASC annual meetings - 2020-2024: Shahid Mukhtar (United States of America), Yuling Jiao (China) Over the next few years the MASC Directors will encourage subcommittee members to take a greater role In late 2021 another two new directors will in the organisations of workshops at ICAR meetings. be elected for a four-year term. In that election we will improve the gender balance on the board of directors One strength of the global Arabidopsis research as well as maintaining geographical diversity. Currently community comes in the form of the genomic resources the directors broadly oversee MASC activities. We will and seed stocks that are available for use. This document circulate details of the MASC election procedure in the includes reports the three major international stock summer of 2021. centres (ABRC, NASC, RIKEN Stock Centre), from two major international phenotyping projects, from Gramene The MASC coordinator/secretary position was and
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