Beluga Whale Pvhl Enhances HIF-2A Activity Via Inducing
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Evolutionary History of the Porpoises
bioRxiv preprint doi: https://doi.org/10.1101/851469; this version posted November 22, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Evolutionary history of the porpoises (Phocoenidae) across the 2 speciation continuum: a mitogenome phylogeographic perspective 3 4 Yacine Ben Chehida1, Julie Thumloup1, Cassie Schumacher2, Timothy Harkins2, Alex 5 Aguilar3, Asunción Borrell3, Marisa Ferreira4, Lorenzo Rojas-Bracho5, Kelly M. Roberston6, 6 Barbara L. Taylor6, Gísli A. Víkingsson7, Arthur Weyna8, Jonathan Romiguier8, Phillip A. 7 Morin6, Michael C. Fontaine1,9* 8 9 1 Groningen Institute for Evolutionary Life Sciences (GELIFES), University of Groningen, PO Box 11103 CC, 10 Groningen, The Netherlands 11 2 Swift Biosciences, 674 S. Wagner Rd., Suite 100, Ann Arbor, MI 48103, USA 12 3 IRBIO and Department of Evolutive Biology, Ecology and Environmental Sciences, Faculty of Biology, 13 University of Barcelona, Diagonal 643, 08071 Barcelona, Spain 14 4 MATB-Sociedade Portuguesa de Vida Selvagem, Estação de Campo de Quiaios, Apartado EC Quiaios, 3080- 15 530 Figueira da Foz, Portugal & CPRAM-Ecomare, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da 16 Nazaré, Portugal 17 5 Instituto Nacional de Ecología, Centro de Investigación Científica y de Educación Superior de Ensenada, 18 Carretera Ensenada-Tijuana 3918, Fraccionamiento Zona Playitas, Ensenada, BC 22860, Mexico 19 6 Southwest Fisheries Science Center, National Marine Fisheries Service, NOAA, 8901 La Jolla Shores Dr., La 20 Jolla, California 92037, USA 21 7 Marine and Freshwater Research Institute, PO Box 1390, 121 Reykjavik, Iceland 22 8 Institut des Sciences de l’Évolution (Université de Montpellier, CNRS UMR 5554), Montpellier, France 23 9 Laboratoire MIVEGEC (Université de Montpellier, UMR CNRS 5290, IRD 229), Centre IRD de Montpellier, 24 Montpellier, France 25 26 *Corresponding author: Michael C. -
Unsustainable Food Systems Threaten Wild Crop and Dolphin Species
INTERNATIONAL PRESS RELEASE Embargoed until: 07:00 GMT (16:00 JST) 5 December 2017 Elaine Paterson, IUCN Media Relations, t+44 1223 331128, email [email protected] Goska Bonnaveira, IUCN Media Relations, m +41 792760185, email [email protected] [In Japan] Cheryl-Samantha MacSharry, IUCN Media Relations, t+44 1223 331128, email [email protected] Download photographs here Download summary statistics here Unsustainable food systems threaten wild crop and dolphin species Tokyo, Japan, 5 December 2017 (IUCN) – Species of wild rice, wheat and yam are threatened by overly intensive agricultural production and urban expansion, whilst poor fishing practices have caused steep declines in the Irrawaddy Dolphin and Finless Porpoise, according to the latest update of The IUCN Red List of Threatened Species™. Today’s Red List update also reveals that a drying climate is pushing the Ringtail Possum to the brink of extinction. Three reptile species found only on an Australian island – the Christmas Island Whiptail-skink, the Blue- tailed Skink (Cryptoblepharus egeriae) and the Lister’s Gecko – have gone extinct, according to the update. But in New Zealand, conservation efforts have improved the situation for two species of Kiwi. “Healthy, species-rich ecosystems are fundamental to our ability to feed the world’s growing population and achieve the UN Sustainable Development Goal 2 – to end hunger by 2030,” says IUCN Director General Inger Andersen. “Wild crop species, for example, maintain genetic diversity of agricultural crops -
Cetacean Fact Sheets for 1St Grade
Whale & Dolphin fact sheets Page CFS-1 Cetacean Fact Sheets Photo/Image sources: Whale illustrations by Garth Mix were provided by NOAA Fisheries. Thanks to Jonathan Shannon (NOAA Fisheries) for providing several photographs for these fact sheets. Beluga: http://en.wikipedia.org/wiki/File:Beluga03.jpg http://upload.wikimedia.org/wikipedia/commons/4/4b/Beluga_size.svg Blue whale: http://upload.wikimedia.org/wikipedia/commons/d/d3/Blue_Whale_001_noaa_body_color.jpg; Humpback whale: http://www.nmfs.noaa.gov/pr/images/cetaceans/humpbackwhale_noaa_large.jpg Orca: http://www.nmfs.noaa.gov/pr/species/mammals/cetaceans/killerwhale_photos.htm North Atlantic right whale: http://www.nmfs.noaa.gov/pr/images/cetaceans/narw_flfwc-noaa.jpg Narwhal: http://www.noaanews.noaa.gov/stories2010/images/narwhal_pod_hires.jpg http://upload.wikimedia.org/wikipedia/commons/a/ac/Narwhal_size.svg Pygmy sperm whale: http://swfsc.noaa.gov/textblock.aspx?ParentMenuId=230&id=1428 Minke whale: http://www.birds.cornell.edu/brp/images2/MinkeWhale_NOAA.jpg/view Gray whale: http://upload.wikimedia.org/wikipedia/commons/b/b8/Gray_whale_size.svg Dall’s porpoise: http://en.wikipedia.org/wiki/File:Dall%27s_porpoise_size.svg Harbor porpoise: http://www.nero.noaa.gov/protected/porptrp/ Sei whale: http://upload.wikimedia.org/wikipedia/commons/thumb/a/a1/Sei_whale_size.svg/500px- Sei_whale_size.svg.png Whale & Dolphin fact sheets Page CFS-2 Beluga Whale (buh-LOO-guh) Photo by Greg Hume FUN FACTS Belugas live in cold water. They swim under ice. They are called white whales. They are the only whales that can move their necks. They can move their heads up and down and side to side. Whale & Dolphin fact sheets Page CFS-3 Baby belugas are gray. -
Fall12 Rare Southern California Sperm Whale Sighting
Rare Southern California Sperm Whale Sighting Dolphin/Whale Interaction Is Unique IN MAY 2011, a rare occurrence The sperm whale sighting off San of 67 minutes as the whales traveled took place off the Southern California Diego was exciting not only because slowly east and out over the edge of coast. For the first time since U.S. of its rarity, but because there were the underwater ridge. The adult Navy-funded aerial surveys began in also two species of dolphins, sperm whales undertook two long the area in 2008, a group of 20 sperm northern right whale dolphins and dives lasting about 20 minutes each; whales, including four calves, was Risso’s dolphins, interacting with the the calves surfaced earlier, usually in seen—approximately 24 nautical sperm whales in a remarkable the company of one adult whale. miles west of San Diego. manner. To the knowledge of the During these dives, the dolphins researchers who conducted this aerial remained at the surface and Operating under a National Marine survey, this type of inter-species asso- appeared to wait for the sperm Fisheries Service (NMFS) permit, the ciation has not been previously whales to re-surface. U.S. Navy has been conducting aerial reported. Video and photographs surveys of marine mammal and sea Several minutes after the sperm were taken of the group over a period turtle behavior in the near shore and whales were first seen, the Risso’s offshore waters within the Southern California Range Complex (SOCAL) since 2008. During a routine survey the morning of 14 May 2011, the sperm whales were sighted on the edge of an offshore bank near a steep drop-off. -
New Finds of Giant Raptorial Sperm Whale Teeth (Cetacea, Physeteroidea) from the Westerschelde Estuary (Province of Zeeland, the Netherlands)
1 Online Journal of the Natural History Museum Rotterdam, with contributions on zoology, paleontology and urban ecology deinsea.nl New finds of giant raptorial sperm whale teeth (Cetacea, Physeteroidea) from the Westerschelde Estuary (province of Zeeland, the Netherlands) Jelle W.F. Reumer 1,2, Titus H. Mens 1 & Klaas Post 2 1 Utrecht University, Faculty of Geosciences, P.O. Box 80115, 3508 TC Utrecht, the Netherlands 2 Natural History Museum Rotterdam, Westzeedijk 345 (Museumpark), 3015 AA Rotterdam, the Netherlands ABSTRACT Submitted 26 June 2017 Two large sperm whale teeth were found offshore from Breskens in the Westerschelde Accepted 28 July 2017 estuary. Comparison shows they share features with the teeth of the stem physteroid Published 23 August 2017 Zygophyseter, described from the Late Miocene of southern Italy. Both teeth are however significantly larger than the teeth of theZygophyseter type material, yet still somewhat Author for correspondence smaller than the teeth of the giant raptorial sperm whale Livyatan melvillei, and confirm the Jelle W.F. Reumer: presence of so far undescribed giant macroraptorial sperm whales in the Late Miocene of [email protected] The Netherlands. Editors of this paper Keywords Cetacea, Odontoceti, Westerschelde, Zygophyseter Bram W. Langeveld C.W. (Kees) Moeliker Cite this article Reumer, J.W.F., Mens, T.H. & Post, K. 2017 - New finds of giant raptorial sperm whale teeth (Cetacea, Physeteroidea) from the Westerschelde Estuary (province of Copyright Zeeland, the Netherlands) - Deinsea 17: 32 - 38 2017 Reumer, Mens & Post Distributed under Creative Commons CC-BY 4.0 DEINSEA online ISSN 2468-8983 INTRODUCTION presence of teeth in both maxilla and mandibula they are iden- Fossil Physeteroidea are not uncommon in Neogene marine tified as physeteroid teeth (Gol’din & Marareskul 2013). -
Conservation Status and the Use of Irrawaddy Dolphins As a Flagship
Conservation status and the use of Irrawaddy dolphins as a flagship species for climate adaptation in the Peam Krasop Wildlife Sanctuary, Cambodia Building Resilience to Climate Change Impacts in Coastal Southeast Asia (BCR) Brian Smith, Sun Kong and Lieng Saroeun INTERNATIONAL UNION FOR CONSERVATION OF NATURE The designation of geographical entities in this Citation: Smith, B., Kong, S., and Saroeun, L. book, and the presentation of the material, do not (2014). Conservation status and the use of imply the expression of any opinion whatsoever on Irrawaddy dolphins as a flagship species for climate adaptation in the Peam Krasop Wildlife the part of IUCN or the European Union concerning Sanctuary, Cambodia. Thailand: IUCN. 80pp. the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its Cover photo: Dolphins in Koh Kong Province, frontiers or boundaries. The views expressed in this Cambodia © IUCN Cambodia/Sun Kong publication do not necessarily reflect those of IUCN, the European Union or any other participating Layout by: Ria Sen organizations. Produced by: IUCN Southeast Asia Group This publication has been made possible by funding from the European Union. Available from: IUCN Asia Regional Office Published by: IUCN Asia in Bangkok, Thailand 63 Soi Prompong, Sukhumvit 39, Wattana 10110 Bangkok, Thailand Copyright: © 2014 IUCN, International Union for Tel: +66 2 662 4029 Conservation of Nature and Natural Resources IUCN Cambodia Reproduction of this publication for educational or #6B, St. 368, Boeng Keng Kang III, other non-commercial purposes is authorized Chamkarmon, PO Box 1504, Phnom Penh, without prior written permission from the copyright Cambodia holder provided the source is fully acknowledgeRia d. -
Kogia Species Guild
Supplemental Volume: Species of Conservation Concern SC SWAP 2015 Sperm Whales Guild Dwarf sperm whale (Kogia sima) Pygmy sperm whale (Kogia breviceps) Contributor (2005): Wayne McFee (NOAA) Reviewed and Edited (2012): Wayne McFee (NOAA) DESCRIPTION Taxonomy and Basic Description The pygmy sperm whale was first described by de Blainville in 1838. The dwarf sperm whale was first described by Owen in 1866. Both were considered a Illustration by Pieter A. Folkens single species until 1966. These are the only two species in the family Kogiidae. The species name for the dwarf sperm whale was changed in 1998 from ‘simus’ to ‘sima.’ Neither the pygmy nor dwarf sperm whale are kin to the true sperm whale (Physeter macrocephalus). At sea, these two species are virtually indistinguishable. Both species are black dorsally with a white underside. They possess a shark-like head with a narrow under-slung lower jaw and a light colored “false gill” that runs between the eye and the flipper. Small flippers are positioned far forward on the body. Pygmy sperm whales generally have between 12 and 16 (occasionally 10 to 11) pairs of needle- like teeth in the lower jaw. They can attain lengths up to 3.5 m (11.5 ft.) and weigh upwards of 410 kg (904 lbs.). A diagnostic character of this species is the low, falcate dorsal fin (less than 5% of the body length) positioned behind the midpoint on the back. Dwarf sperm whales generally have 8 to 11 (rarely up to 13) pairs of teeth in the lower jaw and can have up to 3 pairs of teeth in the upper jaw. -
Killer Whale (Orcinus Orca) Occurrence and Predation in the Bahamas
Journal of the Marine Biological Association of the United Kingdom, page 1 of 5. # Marine Biological Association of the United Kingdom, 2013 doi:10.1017/S0025315413000908 Killer whale (Orcinus orca) occurrence and predation in the Bahamas charlotte dunn and diane claridge Bahamas Marine Mammal Research Organisation, PO Box AB-20714, Marsh Harbour, Abaco, Bahamas Killer whales (Orcinus orca) have a cosmopolitan distribution, yet little is known about populations that inhabit tropical waters. We compiled 34 sightings of killer whales in the Bahamas, recorded from 1913 to 2011. Group sizes were generally small (mean ¼ 4.2, range ¼ 1–12, SD ¼ 2.6). Thirteen sightings were documented with photographs and/or video of suffi- cient quality to allow individual photo-identification analysis. Of the 45 whales photographed, 14 unique individual killer whales were identified, eight of which were re-sighted between two and nine times. An adult female (Oo6) and a now-adult male (Oo4), were first seen together in 1995, and have been re-sighted together eight times over a 16-yr period. To date, killer whales in the Bahamas have only been observed preying on marine mammals, including Atlantic spotted dolphin (Stenella frontalis), Fraser’s dolphin (Lagenodelphis hosei), pygmy sperm whale (Kogia breviceps) and dwarf sperm whale (Kogia sima), all of which are previously unrecorded prey species for Orcinus orca. Keywords: killer whales, Bahamas, predation, Atlantic, Orcinus orca Submitted 30 December 2012; accepted 15 June 2013 INTRODUCTION encounters with killer whales documented during dedicated marine mammal surveys. Since 1991, marine mammal sight- Killer whales are predominantly temperate or cold water species ing reports have been obtained through a public sighting and much is known about their distribution, behavioural ecology network established and maintained by the Bahamas Marine and localized abundance in colder climes (Forney & Wade, Mammal Research Organization (BMMRO). -
Pygmy Sperm Whale (Kogia Breviceps)
Pygmy Sperm Whale (Kogia breviceps) Image from UNCW Marine Mammal Program Taken under NOAA scientific permit #948-1692-00 Courtesy of NOAA Species Description: - Small and robust body that tapers near the fluke - Body coloration is counter-shaded, ranging from brown to - Small, low, rounded dorsal fin dark blue gray on their dorsal surface, to white to soft pink - Pointed snout, underslung and bracket-shaped pigment pattern on their ventral surface (false gill slit) make the head appear "shark-like" - Average length at physical maturity is ~ 11.5 ft (3.5 m) - Single blowhole on top of head - Average weight at physical maturity is ~ 700 – 1,100 lb - Males and females are of similar size (315 – 500 kg) Behavior: Reproduction: - Appear sluggish and slow moving - Lifespan estimated to be 23 years - Typically seen lying motionless or “logging” at the surface - Sexual maturity reached at 4-5 years - Roll or sink from view without showing flukes to initiate dive - Gestation period approximately 9 – 11 months - Usually seen as solitary animals or in groups of 6 – 7 - Newborn calves weigh ~ 110 lb (50 kg) - Average swimming speed is ~ 3 knots (1.5 m/s) - Newborn calves are ~ 3.9 ft (1.2 m) in length - May expel dark, ink-like feces to use as an escape - Calving season: March – August mechanism, much like a cephalopod Diet: - Cephalopods Threats / Conservation: (squid and octopus) - Not Endangered - Deep sea fishes - Protected underConservation/ the Marine Mammal Protection Threats: Act - Crustaceans (MMPA) in the United States (crabs and shrimp) -
Review of Small Cetaceans. Distribution, Behaviour, Migration and Threats
Review of Small Cetaceans Distribution, Behaviour, Migration and Threats by Boris M. Culik Illustrations by Maurizio Wurtz, Artescienza Marine Mammal Action Plan / Regional Seas Reports and Studies no. 177 Published by United Nations Environment Programme (UNEP) and the Secretariat of the Convention on the Conservation of Migratory Species of Wild Animals (CMS). Review of Small Cetaceans. Distribution, Behaviour, Migration and Threats. 2004. Compiled for CMS by Boris M. Culik. Illustrations by Maurizio Wurtz, Artescienza. UNEP / CMS Secretariat, Bonn, Germany. 343 pages. Marine Mammal Action Plan / Regional Seas Reports and Studies no. 177 Produced by CMS Secretariat, Bonn, Germany in collaboration with UNEP Coordination team Marco Barbieri, Veronika Lenarz, Laura Meszaros, Hanneke Van Lavieren Editing Rüdiger Strempel Design Karina Waedt The author Boris M. Culik is associate Professor The drawings stem from Prof. Maurizio of Marine Zoology at the Leibnitz Institute of Wurtz, Dept. of Biology at Genova Univer- Marine Sciences at Kiel University (IFM-GEOMAR) sity and illustrator/artist at Artescienza. and works free-lance as a marine biologist. Contact address: Contact address: Prof. Dr. Boris Culik Prof. Maurizio Wurtz F3: Forschung / Fakten / Fantasie Dept. of Biology, Genova University Am Reff 1 Viale Benedetto XV, 5 24226 Heikendorf, Germany 16132 Genova, Italy Email: [email protected] Email: [email protected] www.fh3.de www.artescienza.org © 2004 United Nations Environment Programme (UNEP) / Convention on Migratory Species (CMS). This publication may be reproduced in whole or in part and in any form for educational or non-profit purposes without special permission from the copyright holder, provided acknowledgement of the source is made. -
Marine Mammals of British Columbia Current Status, Distribution and Critical Habitats
Marine Mammals of British Columbia Current Status, Distribution and Critical Habitats John Ford and Linda Nichol Cetacean Research Program Pacific Biological Station Nanaimo, BC Outline • Brief (very) introduction to marine mammals of BC • Historical occurrence of whales in BC • Recent efforts to determine current status of cetacean species • Recent attempts to identify Critical Habitat for Threatened & Endangered species • Overview of pinnipeds in BC Marine Mammals of British Columbia - 25 Cetaceans, 5 Pinnipeds, 1 Mustelid Baleen Whales of British Columbia Family Balaenopteridae – Rorquals (5 spp) Blue Whale Balaenoptera musculus SARA Status = Endangered Fin Whale Balaenoptera physalus = Threatened = Spec. Concern Sei Whale Balaenoptera borealis Family Balaenidae – Right Whales (1 sp) Minke Whale Balaenoptera acutorostrata North Pacific Right Whale Eubalaena japonica Humpback Whale Megaptera novaeangliae Family Eschrichtiidae– Grey Whales (1 sp) Grey Whale Eschrichtius robustus Toothed Whales of British Columbia Family Physeteridae – Sperm Whales (3 spp) Sperm Whale Physeter macrocephalus Pygmy Sperm Whale Kogia breviceps Dwarf Sperm Whale Kogia sima Family Ziphiidae – Beaked Whales (4 spp) Hubbs’ Beaked Whale Mesoplodon carlhubbsii Stejneger’s Beaked Whale Mesoplodon stejnegeri Baird’s Beaked Whale Berardius bairdii Cuvier’s Beaked Whale Ziphius cavirostris Toothed Whales of British Columbia Family Delphinidae – Dolphins (9 spp) Pacific White-sided Dolphin Lagenorhynchus obliquidens Killer Whale Orcinus orca Striped Dolphin Stenella -
Mitochondrial Genomics Reveals the Evolutionary History of The
www.nature.com/scientificreports OPEN Mitochondrial genomics reveals the evolutionary history of the porpoises (Phocoenidae) across the speciation continuum Yacine Ben Chehida 1, Julie Thumloup1, Cassie Schumacher2, Timothy Harkins2, Alex Aguilar 3, Asunción Borrell 3, Marisa Ferreira 4,5, Lorenzo Rojas‑Bracho6, Kelly M. Robertson7, Barbara L. Taylor7, Gísli A. Víkingsson 8, Arthur Weyna9, Jonathan Romiguier9, Phillip A. Morin 7 & Michael C. Fontaine 1,10* Historical variation in food resources is expected to be a major driver of cetacean evolution, especially for the smallest species like porpoises. Despite major conservation issues among porpoise species (e.g., vaquita and fnless), their evolutionary history remains understudied. Here, we reconstructed their evolutionary history across the speciation continuum. Phylogenetic analyses of 63 mitochondrial genomes suggest that porpoises radiated during the deep environmental changes of the Pliocene. However, all intra-specifc subdivisions were shaped during the Quaternary glaciations. We observed analogous evolutionary patterns in both hemispheres associated with convergent evolution to coastal versus oceanic environments. This suggests that similar mechanisms are driving species diversifcation in northern (harbor and Dall’s) and southern species (spectacled and Burmeister’s). In contrast to previous studies, spectacled and Burmeister’s porpoises shared a more recent common ancestor than with the vaquita that diverged from southern species during the Pliocene. The low genetic diversity observed in the vaquita carried signatures of a very low population size since the last 5,000 years. Cryptic lineages within Dall’s, spectacled and Pacifc harbor porpoises suggest a richer evolutionary history than previously suspected. These results provide a new perspective on the mechanisms driving diversifcation in porpoises and an evolutionary framework for their conservation.