Alterations of Actin Cytoskeleton and Arterial Protein Amounts in Patients with Obstructive Jaundice
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2812 Matrix Vesicles: Structure, Composition, Formation and Function in Ca
[Frontiers in Bioscience 16, 2812-2902, June 1, 2011] Matrix vesicles: structure, composition, formation and function in calcification Roy E. Wuthier Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208 TABLE OF CONTENTS 1. Abstract 2. Introduction 3. Morphology of matrix vesicles (MVs) 3.1. Conventional transmission electron microscopy 3.2. Cryofixation, freeze-substitution electron microscopy 3.3. Freeze-fracture studies 4. Isolation of MVs 4.1. Crude collagenase digestion methods 4.2. Non-collagenase dependent methods 4.3. Cell culture methods 4.4. Modified collagenase digestion methods 4.5. Other isolation methods 5. MV proteins 5.1. Early SDS-PAGE studies 5.2. Isolation and identification of major MV proteins 5.3. Sequential extraction, separation and characterization of major MV proteins 5.4. Proteomic characterization of MV proteins 6. MV-associated extracellular matrix proteins 6.1. Type VI collagen 6.2. Type X collagen 6.3. Proteoglycan link protein and aggrecan core protein 6.4. Fibrillin-1 and fibrillin-2 7. MV annexins – acidic phospholipid-dependent ca2+-binding proteins 7.1. Annexin A5 7.2. Annexin A6 7.3. Annexin A2 7.4. Annexin A1 7.5. Annexin A11 and Annexin A4 8. MV enzymes 8.1. Tissue-nonspecific alkaline phosphatase(TNAP) 8.1.1. Molecular structure 8.1.2. Amino acid sequence 8.1.3. 3-D structure 8.1.4. Disposition in the MV membrane 8.1.5. Catalytic properties 8.1.6. Collagen-binding properties 8.2. Nucleotide pyrophosphate phosphodiesterase (NPP1, PC1) 8.3. PHOSPHO-1 (Phosphoethanolamine/Phosphocholine phosphatase 8.4. Acid phosphatase 8.5. -
Cell Surface-Expressed Phosphatidylserine As Therapeutic Target to Enhance Phagocytosis of Apoptotic Cells
Cell Death and Differentiation (2013) 20, 49–56 & 2013 Macmillan Publishers Limited All rights reserved 1350-9047/13 www.nature.com/cdd Cell surface-expressed phosphatidylserine as therapeutic target to enhance phagocytosis of apoptotic cells K Schutters1, DHM Kusters1, MLL Chatrou1, T Montero-Melendez2, M Donners3, NM Deckers1, DV Krysko4,5, P Vandenabeele4,5, M Perretti2, LJ Schurgers1 and CPM Reutelingsperger*,1 Impaired efferocytosis has been shown to be associated with, and even to contribute to progression of, chronic inflammatory diseases such as atherosclerosis. Enhancing efferocytosis has been proposed as strategy to treat diseases involving inflammation. Here we present the strategy to increase ‘eat me’ signals on the surface of apoptotic cells by targeting cell surface- expressed phosphatidylserine (PS) with a variant of annexin A5 (Arg-Gly-Asp–annexin A5, RGD–anxA5) that has gained the function to interact with avb3 receptors of the phagocyte. We describe design and characterization of RGD–anxA5 and show that introduction of RGD transforms anxA5 from an inhibitor into a stimulator of efferocytosis. RGD–anxA5 enhances engulfment of apoptotic cells by phorbol-12-myristate-13-acetate-stimulated THP-1 (human acute monocytic leukemia cell line) cells in vitro and resident peritoneal mouse macrophages in vivo. In addition, RGD–anxA5 augments secretion of interleukin-10 during efferocytosis in vivo, thereby possibly adding to an anti-inflammatory environment. We conclude that targeting cell surface- expressed PS is an attractive strategy -
Proteomic Analysis of Exosome-Like Vesicles Derived from Breast Cancer Cells
ANTICANCER RESEARCH 32: 847-860 (2012) Proteomic Analysis of Exosome-like Vesicles Derived from Breast Cancer Cells GEMMA PALAZZOLO1, NADIA NINFA ALBANESE2,3, GIANLUCA DI CARA3, DANIEL GYGAX4, MARIA LETIZIA VITTORELLI3 and IDA PUCCI-MINAFRA3 1Institute for Biomedical Engineering, Laboratory of Biosensors and Bioelectronics, ETH Zurich, Switzerland; 2Department of Physics, University of Palermo, Palermo, Italy; 3Centro di Oncobiologia Sperimentale (C.OB.S.), Oncology Department La Maddalena, Palermo, Italy; 4Institute of Chemistry and Bioanalytics, University of Applied Sciences Northwestern Switzerland FHNW, Muttenz, Switzerland Abstract. Background/Aim: The phenomenon of membrane that vesicle production allows neoplastic cells to exert different vesicle-release by neoplastic cells is a growing field of interest effects, according to the possible acceptor targets. For instance, in cancer research, due to their potential role in carrying a vesicles could potentiate the malignant properties of adjacent large array of tumor antigens when secreted into the neoplastic cells or activate non-tumoral cells. Moreover, vesicles extracellular medium. In particular, experimental evidence show could convey signals to immune cells and surrounding stroma that at least some of the tumor markers detected in the blood cells. The present study may significantly contribute to the circulation of mammary carcinoma patients are carried by knowledge of the vesiculation phenomenon, which is a critical membrane-bound vesicles. Thus, biomarker research in breast device for trans cellular communication in cancer. cancer can gain great benefits from vesicle characterization. Materials and Methods: Conditioned medium was collected The phenomenon of membrane release in the extracellular from serum starved MDA-MB-231 sub-confluent cell cultures medium has long been known and was firstly described by and exosome-like vesicles (ELVs) were isolated by Paul H. -
Calmodulin Dependent Wound Repair in Dictyostelium Cell Membrane
cells Article Ca2+–Calmodulin Dependent Wound Repair in Dictyostelium Cell Membrane Md. Shahabe Uddin Talukder 1,2, Mst. Shaela Pervin 1,3, Md. Istiaq Obaidi Tanvir 1, Koushiro Fujimoto 1, Masahito Tanaka 1, Go Itoh 4 and Shigehiko Yumura 1,* 1 Graduate School of Sciences and Technology for Innovation, Yamaguchi University, Yamaguchi 753-8511, Japan; [email protected] (M.S.U.T.); [email protected] (M.S.P.); [email protected] (M.I.O.T.); [email protected] (K.F.); [email protected] (M.T.) 2 Institute of Food and Radiation Biology, AERE, Bangladesh Atomic Energy Commission, Savar, Dhaka 3787, Bangladesh 3 Rajshahi Diabetic Association General Hospital, Luxmipur, Jhautala, Rajshahi 6000, Bangladesh 4 Department of Molecular Medicine and Biochemistry, Akita University Graduate School of Medicine, Akita 010-8543, Japan; [email protected] * Correspondence: [email protected]; Tel./Fax: +81-83-933-5717 Received: 2 April 2020; Accepted: 21 April 2020; Published: 23 April 2020 Abstract: Wound repair of cell membrane is a vital physiological phenomenon. We examined wound repair in Dictyostelium cells by using a laserporation, which we recently invented. We examined the influx of fluorescent dyes from the external medium and monitored the cytosolic Ca2+ after wounding. The influx of Ca2+ through the wound pore was essential for wound repair. Annexin and ESCRT components accumulated at the wound site upon wounding as previously described in animal cells, but these were not essential for wound repair in Dictyostelium cells. We discovered that calmodulin accumulated at the wound site upon wounding, which was essential for wound repair. -
IDENTIFICATION and CHARACTERIZATION of ACTIN-REGULATORY PROTEINS in the HAIR CELL's CUTICULAR PLATE by LANA MARY POLLOCK Subm
IDENTIFICATION AND CHARACTERIZATION OF ACTIN-REGULATORY PROTEINS IN THE HAIR CELL’S CUTICULAR PLATE by LANA MARY POLLOCK Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy Dissertation advisor: Brian M. McDermott Jr., Ph.D. Department of Genetics and Genome Sciences CASE WESTERN RESERVE UNIVERSITY January 2016 Case Western Reserve University School of Graduate Studies We, the thesis committee, hereby approve the thesis/dissertation of Lana Pollock, candidate for the degree of Doctor of Philosophy (PhD).* (signed)_________Zhenghe Wang, Ph.D._________________ (chair of committee) ___________Brian McDermott, Ph.D._______________ ___________ Hua Lou, Ph.D._____________________ ___________Stephen Maricich, Ph.D., M.D.___________ ___________Anthony Wynshaw-Boris, Ph.D., M.D._____ Date of defense_____September 8th, 2015_______________ *we also certify that written approval has been obtained for release of any proprietary material contained therein 2 This thesis is dedicated to Daniel Margevicius. Thank you for your unwavering love and support. Ačiū!! 3 Table of contents List of Tables ........................................................................................................ 7 List of Figures ....................................................................................................... 8 List of abbreviations ............................................................................................ 13 Abstract ............................................................................................................. -
Research and Application of Hydrostatic High Pressure in Tumor Vaccines (Review)
ONCOLOGY REPORTS 45: 75, 2021 Research and application of hydrostatic high pressure in tumor vaccines (Review) SHUAI YAN1, KAI LIU2, LIN MU3, JIANFENG LIU2, WAN TANG1 and BIN LIU2 Departments of 1Operating Room, 2Hand and Foot Surgery, and 3Radiology, The First Hospital of Jilin University, Changchun, Jilin 130021, P.R. China Received February 19, 2020; Accepted March 5, 2021 DOI: 10.3892/or.2021.8026 Abstract. It is well known that hydrostatic pressure (HP) is a 5. High hydrostatic pressure and immunogenic cell death of physical parameter that is now regarded as an important vari‑ tumors able for life. High hydrostatic pressure (HHP) technology has 6. High hydrostatic pressure and dendritic cell‑based tumor influenced biological systems for more than 100 years. Food vaccines and bioscience researchers have shown great interest in HHP 7. Tumor vaccines and Annexin A5 technology over the past few decades. The development of 8. Conclusions and outlooks knowledge related to this area can better facilitate the applica‑ tion of HHP in the life sciences. Furthermore, new applications for HHP may come from these current studies, particularly in 1. Introduction tumor vaccines. Currently, cancer recurrence and metastasis continue to pose a serious threat to human health. The limited High hydrostatic pressure (HHP) is a traditional technology efficacy of conventional treatments has led to the need for used to produce steel, alloys, ceramics, and synthetic mate‑ breakthroughs in immunotherapy and other related areas. rials (1). Over the past few decades, HHP has also been used for Research into tumor vaccines is providing new insights for non‑heat pasteurization of processed foods, designed to extend cancer treatment. -
Vinexin Family (SORBS) Proteins Play Different Roles in Stiffness- Sensing and Contractile Force Generation Takafumi Ichikawa1,2, Masahiro Kita1, Tsubasa S
© 2017. Published by The Company of Biologists Ltd | Journal of Cell Science (2017) 130, 3517-3531 doi:10.1242/jcs.200691 RESEARCH ARTICLE Vinexin family (SORBS) proteins play different roles in stiffness- sensing and contractile force generation Takafumi Ichikawa1,2, Masahiro Kita1, Tsubasa S. Matsui3,4, Ayaka Ichikawa Nagasato1, Tomohiko Araki3, Shian-Huey Chiang5, Takuhito Sezaki1, Yasuhisa Kimura1, Kazumitsu Ueda1,2, Shinji Deguchi3,4, Alan R. Saltiel5,* and Noriyuki Kioka1,2,‡ ABSTRACT generating actin stress fibers (SFs) (Geiger et al., 2001). This Vinexin, c-Cbl associated protein (CAP) and Arg-binding protein 2 ‘ ’ (ArgBP2) constitute an adaptor protein family called the vinexin mechanical linkage acts as a molecular clutch to transmit the force (SORBS) family that is targeted to focal adhesions (FAs). Although derived from non-muscle myosin-II-dependent contraction to the numerous studies have focused on each of the SORBS proteins and ECM. Cells on more rigid substrates exert greater contractile forces partially elucidated their involvement in mechanotransduction, a than those on soft substrates (Hoffman et al., 2011; Roca-Cusachs comparative analysis of their function has not been well addressed. et al., 2012; LaCroix et al., 2015). These alterations can lead to Here, we established mouse embryonic fibroblasts that individually stiffness-dependent biochemical signals. Among the numerous FA scaffolding proteins, vinculin is one of expressed SORBS proteins and analysed their functions in an ‘ ’ identical cell context. Both vinexin-α and CAP co-localized with the main clutch molecules that can regulate force transmission. vinculin at FAs and promoted the appearance of vinculin-rich FAs, Vinculin consists of an N-terminal head region and a C-terminal tail α region separated by a flexible proline-rich linker region (Bakolitsa whereas ArgBP2 co-localized with -actinin at the proximal end of – FAs and punctate structures on actin stress fibers (SFs), and induced et al., 2004; Borgon et al., 2004). -
Annexin-A5 Assembled Into Two-Dimensional Arrays Promotes Cell Membrane Repair
ARTICLE Received 1 Nov 2010 | Accepted 9 Mar 2011 | Published 5 Apr 2011 DOI: 10.1038/ncomms1270 Annexin-A5 assembled into two-dimensional arrays promotes cell membrane repair Anthony Bouter1, Céline Gounou1, Rémi Bérat1, Sisareuth Tan1, Bernard Gallois2, Thierry Granier2, Béatrice Langlois d’Estaintot2, Ernst Pöschl3, Bent Brachvogel4 & Alain R. Brisson1 Eukaryotic cells possess a universal repair machinery that ensures rapid resealing of plasma membrane disruptions. Before resealing, the torn membrane is submitted to considerable tension, which functions to expand the disruption. Here we show that annexin-A5 (AnxA5), a protein that self-assembles into two-dimensional (2D) arrays on membranes upon Ca2 + activation, promotes membrane repair. Compared with wild-type mouse perivascular cells, AnxA5-null cells exhibit a severe membrane repair defect. Membrane repair in AnxA5-null cells is rescued by addition of AnxA5, which binds exclusively to disrupted membrane areas. In contrast, an AnxA5 mutant that lacks the ability of forming 2D arrays is unable to promote membrane repair. We propose that AnxA5 participates in a previously unrecognized step of the membrane repair process: triggered by the local influx of Ca2 + , AnxA5 proteins bind to torn membrane edges and form a 2D array, which prevents wound expansion and promotes membrane resealing. 1 Molecular Imaging and NanoBioTechnology, IECB, UMR-5248 CBMN CNRS-University Bordeaux1-ENITAB, Talence F-33402, France. 2 Crystallography of Biological Macromolecules, UMR-5248 CBMN CNRS-University Bordeaux1-ENITAB, Talence F-33402, France. 3 School of Biological Sciences, University of East Anglia, Norwich NR4 7TJ, UK. 4 Center for Biochemistry, Center for Molecular Medicine Cologne, Medical Faculty, University of Cologne, Cologne D-50931, Germany. -
SORBS2 Transcription Is Activated by Telomere Position Effect–Over Long Distance Upon Telomere Shortening in Muscle Cells From
SORBS2 transcription is activated by telomere position effect–over long distance upon telomere shortening in muscle cells from patients with facioscapulohumeral dystrophy Jérôme Robin, Andrew Ludlow, Kimberly Batten, Marie-Cécile Gaillard, Guido Stadler, Frédérique Magdinier, Woodring Wright, Jerry W. Shay To cite this version: Jérôme Robin, Andrew Ludlow, Kimberly Batten, Marie-Cécile Gaillard, Guido Stadler, et al.. SORBS2 transcription is activated by telomere position effect–over long distance upon telomere shortening in muscle cells from patients with facioscapulohumeral dystrophy. Genome Research, Cold Spring Harbor Laboratory Press, 2015, 25 (12), pp.1781 - 1790. 10.1101/gr.190660.115. hal- 01663663 HAL Id: hal-01663663 https://hal-amu.archives-ouvertes.fr/hal-01663663 Submitted on 14 Dec 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Downloaded from genome.cshlp.org on December 13, 2017 - Published by Cold Spring Harbor Laboratory Press Research SORBS2 transcription is activated by telomere position effect–over long distance upon telomere shortening in muscle cells from patients with facioscapulohumeral dystrophy Jérôme D. Robin,1 Andrew T. Ludlow,1 Kimberly Batten,1 Marie-Cécile Gaillard,2 Guido Stadler,1 Frédérique Magdinier,2 Woodring E. -
The Proteome of the Differentiating Mesencephalic Progenitor Cell Line CSM14.1 in Vitro
Hindawi Publishing Corporation BioMed Research International Volume 2014, Article ID 351821, 13 pages http://dx.doi.org/10.1155/2014/351821 Research Article The Proteome of the Differentiating Mesencephalic Progenitor Cell Line CSM14.1 In Vitro B. Weiss,1 S. Haas,1 G. Lessner,1,2 S. Mikkat,3 M. Kreutzer,3 M. O. Glocker,3 A. Wree,1 and O. Schmitt1 1 Department of Anatomy, University of Rostock, Gertrudenstraße 9, 18057 Rostock, Germany 2 Department of Pathology, University of Wurzburg,¨ Josef-Schneider Straße 2, 97080 Wurzburg,¨ Germany 3 Proteome Center Rostock, University of Rostock, Schillingallee 69, 18055 Rostock, Germany Correspondence should be addressed to O. Schmitt; [email protected] Received 5 July 2013; Accepted 16 December 2013; Published 30 January 2014 Academic Editor: Stephan M. Huber Copyright © 2014 B. Weiss et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The treatment of Parkinson’s disease by transplantation of dopaminergic (DA) neurons from human embryonic mesencephalic tissue is a promising approach. However, the origin of these cells causes major problems: availability and standardization of the graft. Therefore, the generation of unlimited numbers of DA neurons from various types of stem or progenitor cells has been brought into focus. A source for DA neurons might be conditionally immortalized progenitor cells. The temperature-sensitive immortalized cell line CSM14.1 derived from the mesencephalon of an embryonic rat has been used successfully for transplantation experiments. This cell line was analyzed by unbiased stereology of cell type specific marker proteins and 2D-gel electrophoresis followed by mass spectrometry to characterize the differentially expressed proteome. -
Defective Membrane Repair Machinery Impairs Survival of Invasive Cancer Cells
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.20.050211; this version posted April 20, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Defective membrane repair machinery impairs survival of invasive cancer cells Bouvet F.1, Ros M.2, Bonedeau E.1, Croissant C.1, Frelin L.1, Saltel F.2, Moreau V.2, Bouter A.1,* 1Institute of Chemistry and Biology of Membranes and Nano-objects, UMR 5248, CNRS, University of Bordeaux, IPB, F-33600 Pessac, France. 2INSERM, Université de Bordeaux, UMR1053, BaRITOn Bordeaux Research in Translational Oncology, 146 Rue Léo Saignat, Bordeaux F-33076, France. *Corresponding author Mailing address: Bât. B14, Allée Geoffroy Saint Hilaire, 33600 Pessac, France E-mail: [email protected]; Tel: +33 540006860 ; Fax : +33 540002200 Running title: Membrane repair and cancer cell migration 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.04.20.050211; this version posted April 20, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Summary Cancer cells are able to reach distant tissues by migration and invasion processes. This study shows that inhibition of the plasma membrane repair machinery may represent a promising avenue for annihilating cancer metastasis. Abstract Cancer cells are able to reach distant tissues by migration and invasion processes. Enhanced ability to cope with physical stresses leading to cell membrane damages may offer to cancer cells high survival rate during metastasis. -
1 SORBS2 Is a Susceptibility Gene to Arrhythmogenic Right Ventricular Cardiomyopathy Yonghe Ding, Phd,1, 2* Jingchun Yang, Phd 1
bioRxiv preprint doi: https://doi.org/10.1101/725077; this version posted August 5, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. SORBS2 is a susceptibility gene to arrhythmogenic right ventricular cardiomyopathy Yonghe Ding, PhD,1, 2* Jingchun Yang, PhD 1, 2*,% Peng Chen, MD,3,# Tong Lu, PhD, MD,2,# Kunli Jiao, MD,1, 2, 4 David Tester, PhD,2 Kai Jiang, PhD,5 Michael J Ackerman, MD, PhD,2 Yigang Li, MD,4 Dao Wu Wang, MD,6 Dao Wen Wang, MD,3 Hon-Chi Lee, MD, PhD,2 Xiaolei Xu, PhD,1, 2 1 Department of Biochemistry and Molecular Biology, 2 Department of Cardiovascular Medicine, Mayo Clinic, Rochester, Minnesota, USA. 3 Division of Cardiology, Departments of Internal Medicine and Genetic Diagnosis Center, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology; Hubei Key Laboratory of Genetics and Molecular Mechanism of Cardiologic Disorders, Wuhan, China. 4 Division of Cardiology, Xinhua Hospital, Shanghai Jiaotong University. 5 Division of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA. 6 State Key Laboratory of Reproductive Medicine, Clinical Center of Reproductive Medicine and Department of Cardiology, the First Affiliated Hospital of Nanjing Medical University, Nanjing, China. *, # Equal contribution % Current address: Gastrointestinal Department, Mayo Clinic Short title: SORBS2 is an ARVC gene Total word count: 6878 1 bioRxiv preprint doi: https://doi.org/10.1101/725077; this version posted August 5, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder.