Hill's Criteria for Causality
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Descriptive Statistics (Part 2): Interpreting Study Results
Statistical Notes II Descriptive statistics (Part 2): Interpreting study results A Cook and A Sheikh he previous paper in this series looked at ‘baseline’. Investigations of treatment effects can be descriptive statistics, showing how to use and made in similar fashion by comparisons of disease T interpret fundamental measures such as the probability in treated and untreated patients. mean and standard deviation. Here we continue with descriptive statistics, looking at measures more The relative risk (RR), also sometimes known as specific to medical research. We start by defining the risk ratio, compares the risk of exposed and risk and odds, the two basic measures of disease unexposed subjects, while the odds ratio (OR) probability. Then we show how the effect of a disease compares odds. A relative risk or odds ratio greater risk factor, or a treatment, can be measured using the than one indicates an exposure to be harmful, while relative risk or the odds ratio. Finally we discuss the a value less than one indicates a protective effect. ‘number needed to treat’, a measure derived from the RR = 1.2 means exposed people are 20% more likely relative risk, which has gained popularity because of to be diseased, RR = 1.4 means 40% more likely. its clinical usefulness. Examples from the literature OR = 1.2 means that the odds of disease is 20% higher are used to illustrate important concepts. in exposed people. RISK AND ODDS Among workers at factory two (‘exposed’ workers) The probability of an individual becoming diseased the risk is 13 / 116 = 0.11, compared to an ‘unexposed’ is the risk. -
Risk Factors Associated with Maternal Age and Other Parameters in Assisted Reproductive Technologies - a Brief Review
Available online at www.pelagiaresearchlibrary.com Pelagia Research Library Advances in Applied Science Research, 2017, 8(2):15-19 ISSN : 0976-8610 CODEN (USA): AASRFC Risk Factors Associated with Maternal Age and Other Parameters in Assisted Reproductive Technologies - A Brief Review Shanza Ghafoor* and Nadia Zeeshan Department of Biochemistry and Biotechnology, University of Gujrat, Hafiz Hayat Campus, Gujrat, Punjab, Pakistan ABSTRACT Assisted reproductive technology is advancing at fast pace. Increased use of ART (Assisted reproductive technology) is due to changing living standards which involve increased educational and career demand, higher rate of infertility due to poor lifestyle and child conceivement after second marriage. This study gives an overview that how advancing age affects maternal and neonatal outcomes in ART (Assisted reproductive technology). Also it illustrates how other factor like obesity and twin pregnancies complicates the scenario. The studies find an increased rate of preterm birth .gestational hypertension, cesarean delivery chances, high density plasma, Preeclampsia and fetal death at advanced age. The study also shows the combinatorial effects of mother age with number of embryos along with number of good quality embryos which are transferred in ART (Assisted reproductive technology). In advanced age women high clinical and multiple pregnancy rate is achieved by increasing the number along with quality of embryos. Keywords: Reproductive techniques, Fertility, Lifestyle, Preterm delivery, Obesity, Infertility INTRODUCTION Assisted reproductive technology actually involves group of treatments which are used to achieve pregnancy when patients are suffering from issues like infertility or subfertility. The treatments can involve invitro fertilization [IVF], intracytoplasmic sperm injection [ICSI], embryo transfer, egg donation, sperm donation, cryopreservation, etc., [1]. -
Clarifying Questions About “Risk Factors”: Predictors Versus Explanation C
Schooling and Jones Emerg Themes Epidemiol (2018) 15:10 Emerging Themes in https://doi.org/10.1186/s12982-018-0080-z Epidemiology ANALYTIC PERSPECTIVE Open Access Clarifying questions about “risk factors”: predictors versus explanation C. Mary Schooling1,2* and Heidi E. Jones1 Abstract Background: In biomedical research much efort is thought to be wasted. Recommendations for improvement have largely focused on processes and procedures. Here, we additionally suggest less ambiguity concerning the questions addressed. Methods: We clarify the distinction between two confated concepts, prediction and explanation, both encom- passed by the term “risk factor”, and give methods and presentation appropriate for each. Results: Risk prediction studies use statistical techniques to generate contextually specifc data-driven models requiring a representative sample that identify people at risk of health conditions efciently (target populations for interventions). Risk prediction studies do not necessarily include causes (targets of intervention), but may include cheap and easy to measure surrogates or biomarkers of causes. Explanatory studies, ideally embedded within an informative model of reality, assess the role of causal factors which if targeted for interventions, are likely to improve outcomes. Predictive models allow identifcation of people or populations at elevated disease risk enabling targeting of proven interventions acting on causal factors. Explanatory models allow identifcation of causal factors to target across populations to prevent disease. Conclusion: Ensuring a clear match of question to methods and interpretation will reduce research waste due to misinterpretation. Keywords: Risk factor, Predictor, Cause, Statistical inference, Scientifc inference, Confounding, Selection bias Introduction (2) assessing causality. Tese are two fundamentally dif- Biomedical research has reached a crisis where much ferent questions, concerning two diferent concepts, i.e., research efort is thought to be wasted [1]. -
Observational Determinism for Concurrent Program Security
Observational Determinism for Concurrent Program Security Steve Zdancewic Andrew C. Myers Department of Computer and Information Science Computer Science Department University of Pennsylvania Cornell University [email protected] [email protected] Abstract This paper makes two contributions. First, it presents a definition of information-flow security that is appropriate for Noninterference is a property of sequential programs that concurrent systems. Second, it describes a simple but ex- is useful for expressing security policies for data confiden- pressive concurrent language with a type system that prov- tiality and integrity. However, extending noninterference to ably enforces security. concurrent programs has proved problematic. In this pa- Notions of secure information flow are usually based on per we present a relatively expressive secure concurrent lan- noninterference [15], a property only defined for determin- guage. This language, based on existing concurrent calculi, istic systems. Intuitively, noninterference requires that the provides first-class channels, higher-order functions, and an publicly visible results of a computation do not depend on unbounded number of threads. Well-typed programs obey a confidential (or secret) information. Generalizing noninter- generalization of noninterference that ensures immunity to ference to concurrent languages is problematic because these internal timing attacks and to attacks that exploit informa- languages are naturally nondeterministic: the order of execu- tion about the thread scheduler. Elimination of these refine- tion of concurrent threads is not specified by the language se- ment attacks is possible because the enforced security prop- mantics. Although this nondeterminism permits a variety of erty extends noninterference with observational determin- thread scheduler implementations, it also leads to refinement ism. -
Judging the Evidence 2018 Contents World Cancer Research Fund Network 3 1
Judging the evidence 2018 Contents World Cancer Research Fund Network 3 1. Introduction 5 2. Randomised controlled trials 6 3. Epidemiological evidence 6 3.1 Cohort studies 9 3.2 Case-control studies 10 3.3 Other study designs 10 4. Meta-analysis 11 5. Experimental evidence 16 5.1 Human studies 16 5.2 Live animal models 16 5.3 In vitro studies 17 6. Methods of assessment 17 6.1 Foods, drinks and nutrients 17 6.2 Nutrition status 18 6.3 Physical activity 19 6.4 Cancer outcomes 20 7. Evidence collated for the Continuous Update Project 21 8. The grading criteria 22 8.1 Context for using the criteria 26 8.2 Food-based approach 27 8.3 CUP matrices 28 8.4 Levels and types of judgement 29 9. Conclusions 29 Acknowledgements 30 Abbreviations 34 Glossary 35 References 39 Our Cancer Prevention Recommendations 42 WORLD CANCER RESEARCH FUND NETWORK Our Vision We want to live in a world where no one develops a preventable cancer. Our Mission We champion the latest and most authoritative scientific research from around the world on cancer prevention and survival through diet, weight and physical activity, so that we can help people make informed choices to reduce their cancer risk. As a network, we influence policy at the highest level and are trusted advisors to governments and to other official bodies from around the world. Our Network World Cancer Research Fund International is a not-for-profit organisation that leads and unifies a network of cancer charities with a global reach, dedicated to the prevention of cancer through diet, weight and physical activity. -
Librarianship and the Philosophy of Information
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Library Philosophy and Practice (e-journal) Libraries at University of Nebraska-Lincoln July 2005 Librarianship and the Philosophy of Information Ken R. Herold Hamilton College Follow this and additional works at: https://digitalcommons.unl.edu/libphilprac Part of the Library and Information Science Commons Herold, Ken R., "Librarianship and the Philosophy of Information" (2005). Library Philosophy and Practice (e-journal). 27. https://digitalcommons.unl.edu/libphilprac/27 Library Philosophy and Practice Vol. 3, No. 2 (Spring 2001) (www.uidaho.edu/~mbolin/lppv3n2.htm) ISSN 1522-0222 Librarianship and the Philosophy of Information Ken R. Herold Systems Manager Burke Library Hamilton College Clinton, NY 13323 “My purpose is to tell of bodies which have been transformed into shapes of a different kind.” Ovid, Metamorphoses Part I. Library Philosophy Provocation Information seems to be ubiquitous, diaphanous, a-categorical, discrete, a- dimensional, and knowing. · Ubiquitous. Information is ever-present and pervasive in our technology and beyond in our thinking about the world, appearing to be a generic ‘thing’ arising from all of our contacts with each other and our environment, whether thought of in terms of communication or cognition. For librarians information is a universal concept, at its greatest extent total in content and comprehensive in scope, even though we may not agree that all information is library information. · Diaphanous. Due to its virtuality, the manner in which information has the capacity to make an effect, information is freedom. In many aspects it exhibits a transparent quality, a window-like clarity as between source and patron in an ideal interface or a perfect exchange without bias. -
A Modular Approach to Integrating Multiple Data Sources Into Real-Time Clinical Prediction for Pediatric Diarrhea
RESEARCH ARTICLE A modular approach to integrating multiple data sources into real-time clinical prediction for pediatric diarrhea Ben J Brintz1,2*, Benjamin Haaland3, Joel Howard4, Dennis L Chao5, Joshua L Proctor5, Ashraful I Khan6, Sharia M Ahmed2, Lindsay T Keegan1, Tom Greene1, Adama Mamby Keita7, Karen L Kotloff8, James A Platts-Mills9, Eric J Nelson10,11, Adam C Levine12, Andrew T Pavia4, Daniel T Leung2,13* 1Division of Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, United States; 2Division of Infectious Diseases, Department of Internal Medicine, University of Utah, Salt Lake City, United States; 3Population Health Sciences, University of Utah, Salt Lake City, United States; 4Division of Pediatric Infectious Diseases, University of Utah, Salt Lake City, United States; 5Institute of Disease Modeling, Bill and Melinda Gates Foundation, Seattle, United States; 6International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh; 7Centre Pour le De´veloppement des Vaccins-Mali, Bamako, Mali; 8Division of Infectious Disease and Tropical Pediatrics, University of Maryland, Baltimore, United States; 9Division of Infectious Diseases and International Health, University of Virginia, Charlottesville, United States; 10Departments of Pediatrics, University of Florida, Gainesville, United States; 11Departments of Environmental and Global Health, University of Florida, Gainesville, United States; 12Department of Emergency Medicine, Brown University, Providence, United States; 13Division of Microbiology and Immunology, Department of Internal Medicine, University of Utah, Salt Lake City, United States *For correspondence: [email protected] (BJB); [email protected] (DTL) Abstract Traditional clinical prediction models focus on parameters of the individual patient. For infectious diseases, sources external to the patient, including characteristics of prior patients and Competing interests: The authors declare that no seasonal factors, may improve predictive performance. -
The Anti-Essentialism Paper
The New Pragmatism, Anti-essentialism, and What is Universal: It’s The Situation All The Way Down C. F. Abel Stephen F. Austin State University [email protected] The New Pragmatism, Anti-essentialism, and What is Universal: It’s The Situation All The Way Down C. F. Abel Stephen F. Austin State University [email protected] A well-known scientist once gave a public lecture on astronomy. He described how the Earth orbits around the sun and how the sun, in turn, orbits around the center of a vast collection of stars called our galaxy. At the end of the lecture, a little old lady at the back of the room got up and said: "What you have told us is rubbish. The world is really a flat plate supported on the back of a giant tortoise." The scientist gave a superior smile before replying, "What is the tortoise standing on?" "You're very clever, young man," said the old lady. "But it's turtles all the way down!" Introduction “New Pragmatism” attacks the very foundation of pragmatic thought by denying that we may ever have any definitive experience. As what we are experiencing is up for grabs, we can never know any situation that we may encounter, and we are left to ground both our knowledge and our values in our language games alone. This paper argues that this set of claims is founded on two errors, one regarding the nature of language games and the other regarding the nature of deconstruction. The “Old Pragmatism,” by way of contrast, is non-essentialist but not anti- essentialist, and it resolves the problem of how we might know “the situation,” given the subjectivity of our observations and the contingencies of our language games, by suggesting that our experiences can be understood as existing in, and constituted by, the totality of their particular instances or modes at the time of inquiry. -
1.) What Is the Difference Between Observation and Interpretation? Write a Short Paragraph in Your Journal (5-6 Sentences) Defining Both, with One Example Each
Observation and Response: Creative Response Template can be adapted to fit a variety of classes and types of responses Goals: Students will: • Practice observation skills and develop their abilities to find multiple possibilities for interpretation and response to visual material; • Consider the difference between observation and interpretation; • Develop descriptive skills, including close reading and metaphorical description; • Develop research skills by considering a visual text or object as a primary source; • Engage in creative response to access and communicate intellectually or emotionally challenging material. Observation exercises Part I You will keep a journal as you go through this exercise. This can be a physical notebook that pleases you or a word document on your computer. At junctures during the exercise, you will be asked to comment, define, reflect, and create in your journal on what you just did. Journal responses will be posted to Canvas at the conclusion of the exercise, either as word documents or as Jpegs. 1.) What is the difference between observation and interpretation? Write a short paragraph in your journal (5-6 sentences) defining both, with one example each. 2.) Set a timer on your phone or computer (or oven…) and observe the image provided for 1 minute. Quickly write a preliminary research question about it. At first glance, what are you curious about? What do you want to know? 3.) Set your timer for 5 minutes and write as many observations as possible about it. Try to keep making observations, even when you feel stuck. Keep returning to the question, “What do I see?” No observation is too big or too small, too obvious or too obscure. -
Biocentrism in Environmental Ethics: Questions of Inherent Worth, Etiology, and Teleofunctional Interests David Lewis Rice III University of Arkansas, Fayetteville
University of Arkansas, Fayetteville ScholarWorks@UARK Theses and Dissertations 8-2016 Biocentrism in Environmental Ethics: Questions of Inherent Worth, Etiology, and Teleofunctional Interests David Lewis Rice III University of Arkansas, Fayetteville Follow this and additional works at: http://scholarworks.uark.edu/etd Part of the Ethics and Political Philosophy Commons Recommended Citation Rice, David Lewis III, "Biocentrism in Environmental Ethics: Questions of Inherent Worth, Etiology, and Teleofunctional Interests" (2016). Theses and Dissertations. 1650. http://scholarworks.uark.edu/etd/1650 This Dissertation is brought to you for free and open access by ScholarWorks@UARK. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of ScholarWorks@UARK. For more information, please contact [email protected], [email protected]. Biocentrism in Environmental Ethics: Questions of Inherent Worth, Etiology, and Teleofunctional Interests A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Philosophy by David Rice Delta State University Bachelor of Science in Biology, 1994 Delta State University Master of Science in Natural Sciences in Biology, 1999 University of Mississippi Master of Arts in Philosophy, 2009 August 2016 University of Arkansas This dissertation is approved for recommendation to the Graduate Council. ____________________________________ Dr. Richard Lee Dissertation Director ____________________________________ ____________________________________ Dr. Warren Herold Dr. Tom Senor Committee Member Committee Member Abstract Some biocentrists argue that all living things have "inherent worth". Anything that has inherent worth has interests that provide a reason for why all moral agents should care about it in and of itself. There are, however, some difficulties for biocentric individualist arguments which claim that all living things have inherent worth. -
Could Low Grade Bacterial Infection Contribute to Low Back Pain? a Systematic Review
Urquhart et al. BMC Medicine (2015) 13:13 DOI 10.1186/s12916-015-0267-x RESEARCH ARTICLE Open Access Could low grade bacterial infection contribute to low back pain? A systematic review Donna M Urquhart1*, Yiliang Zheng1, Allen C Cheng1, Jeffrey V Rosenfeld2,3, Patrick Chan2,3, Susan Liew2,4, Sultana Monira Hussain1 and Flavia M Cicuttini1 Abstract Background: Recently, there has been both immense interest and controversy regarding a randomised, controlled trial which showed antibiotics to be effective in the treatment of chronic low back pain (disc herniation with Modic Type 1 change). While this research has the potential to result in a paradigm shift in the treatment of low back pain, several questions remain unanswered. This systematic review aims to address these questions by examining the role of bacteria in low back pain and the relationship between bacteria and Modic change. Methods: We conducted electronic searches of MEDLINE and EMBASE and included studies that examined the relationship between bacteria and back pain or Modic change. Studies were rated based on their methodological quality, a best-evidence synthesis was used to summarise the results, and Bradford Hill’s criteria were used to assess the evidence for causation. Results: Eleven studies were identified. The median (range) age and percentage of female participants was 44.7 (41–46.4) years and 41.5% (27–59%), respectively, and in 7 of the 11 studies participants were diagnosed with disc herniation. Nine studies examined the presence of bacteria in spinal disc material and all identified bacteria, with the pooled estimate of the proportion with positive samples being 34%. -
Building a Better Mousetrap: Patenting Biotechnology in the European
THE BRADFORD HILL CRITERIA: THE FORGOTTEN PREDICATE Dr. Frank C. Woodside, III* & Allison G. Davis** Table of Contents I. INTRODUCTION ....................................................................... 104 II. EPIDEMIOLOGY, DAUBERT, AND ESTABLISHING ASSOCIATION .................................................................... 107 A. Background on the Field of Epidemiology ...................... 107 B. Establishing Association .................................................. 108 C. Daubert and Its Progeny .................................................. 111 III. CAUSATION: THE NINE CRITERIA .................................... 112 A. Strength of Association ................................................... 113 B. Consistency ...................................................................... 114 C. Specificity of the Association .......................................... 116 * Frank C. Woodside, III is of counsel to the law firm of Dinsmore & Shohl. Dr. Woodside is a nationally-known trial lawyer representing manufacturers of pharmaceutical and medical devices, chemicals and flavorings, as well as producers of consumer products. Over a period of more than 40 years, he has tried 80-plus cases to verdict or judgment, serving as primary trial counsel in medical malpractice, product liability, and mass tort cases. Dr. Woodside’s clients include Fortune 500 companies, health care providers, and hospitals. His background to practice Medicine and Surgery for nearly 40 years affords him added knowledge and insight he uses to his