Porphyra: Complex Life Histories in a Harsh Environment: P
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Genetic Variation Within and Among Asexual Populations of Porphyra Umbilicalis Kützing (Bangiales, Rhodophyta) in the Gulf of Maine, USA Renee L
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by UNH Scholars' Repository University of New Hampshire University of New Hampshire Scholars' Repository New Hampshire Agricultural Experiment Station Research Institutes, Centers and Programs 1-13-2016 Genetic variation within and among asexual populations of Porphyra umbilicalis Kützing (Bangiales, Rhodophyta) in the Gulf of Maine, USA Renee L. Eriksen University of New Hampshire, Durham Lindsay A. Green University of New Hampshire, Durham Anita S. Klein University of New Hampshire, Durham, [email protected] Follow this and additional works at: https://scholars.unh.edu/nhaes Recommended Citation Renée L. Eriksen, Lindsay A. Green and Anita S. Klein. Genetic variation within and among asexual populations of Porphyra umbilicalis Kützing (Bangiales, Rhodophyta) in the Gulf of Maine, USA. Botanica Marina 2016; 59(1): 1–12. https://dx.doi.org/ 10.1515/bot-2015-0017 This Article is brought to you for free and open access by the Research Institutes, Centers and Programs at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in New Hampshire Agricultural Experiment Station by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. Botanica Marina 2016; 59(1): 1–12 Renée L. Eriksen*, Lindsay A. Green and Anita S. Klein Genetic variation within and among asexual populations of Porphyra umbilicalis Kützing (Bangiales, Rhodophyta) in the Gulf of Maine, USA DOI 10.1515/bot-2015-0017 Received 16 February, 2015; accepted 8 December, 2015; online first Introduction 13 January, 2016 The marine red alga Porphyra umbilicalis Kützing (Ban- Abstract: The intertidal marine red alga Porphyra umbili- giales, Rhodophyta) is found in the intertidal region on calis reproduces asexually in the Northwest Atlantic. -
Universidad Autónoma De Nuevo León Facultad De Ciencias Biológicas
UNIVERSIDAD AUTÓNOMA DE NUEVO LEÓN FACULTAD DE CIENCIAS BIOLÓGICAS TESIS TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN POR DIANA ELENA AGUIRRE CAVAZOS COMO REQUISITO PARCIAL PARA OBTENER EL GRADO DE DOCTOR EN CIENCIAS CON ACENTUACIÓN EN MANEJO Y ADMINISTRACIÓN DE RECURSOS VEGETALES MAYO, 2018 TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN Comité de Tesis Presidente: Dr. Sergio Manuel Salcedo Martínez. Secretario: Dr. Sergio Moreno Limón. Vocal 1: Hugo Alberto Luna Olvera. Vocal 2: Dr. Marco Antonio Alvarado Vázquez. Vocal 3: Dra. Alejandra Rocha Estrada. TAXONOMÍA, DISTRIBUCIÓN E IMPORTANCIA DE LAS ALGAS DE NUEVO LEÓN Dirección de Tesis Director: Dr. Sergio Manuel Salcedo Martínez. AGRADECIMIENTOS A Dios, por guiar siempre mis pasos y darme fortaleza ante las dificultades. Al Dr. Sergio Manuel Salcedo Martínez, por su disposición para participar como director de este proyecto, por sus consejos y enseñanzas que siempre tendré presente tanto en mi vida profesional como personal; pero sobre todo por su dedicación, paciencia y comprensión que hicieron posible la realización de este trabajo. A la Dra. Alejandra Rocha Estrada, El Dr. Marco Antonio Alvarado Vázquez, el Dr. Sergio Moreno Limón y el Dr. Hugo Alberto Luna Olvera por su apoyo y aportaciones para la realización de este trabajo. Al Dr. Eberto Novelo, por sus valiosas aportaciones para enriquecer el listado taxonómico. A la M.C. Cecilia Galicia Campos, gracias Cecy, por hacer tan amena la estancia en el laboratorio y en el Herbario; por esas pláticas interminables y esas “riso terapias” que siempre levantaban el ánimo. A mis entrañables amigos, “los biólogos”, “los cacos”: Brenda, Libe, Lula, Samy, David, Gera, Pancho, Reynaldo y Ricardo. -
J. Gen. Appl. Microbiol. Doi 10.2323/Jgam.2020.02.003 ©2020 Applied Microbiology, Molecular and Cellular Biosciences Research Foundation
Advance Publication J. Gen. Appl. Microbiol. doi 10.2323/jgam.2020.02.003 ©2020 Applied Microbiology, Molecular and Cellular Biosciences Research Foundation 1 Short Communication 2 Establishment of a firefly luciferase reporter assay system in the unicellular red alga 3 Cyanidioschyzon merolae 4 (Received January 25, 2020; Accepted February 11, 2020; J-STAGE Advance publication date: September 16, 2020) 5 Running Head: Luciferase reporter system in C. merolae 6 Baifeng Zhou1,2, Sota Takahashi1,3, Tokiaki Takemura1,2, Kan Tanaka1,*, Sousuke Imamura1,* 7 1Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute 8 of Technology, Nagatsuta, Midori-ku, Yokohama, Japan 9 2School of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta, Midori- 10 ku, Yokohama, Japan 11 3Interdisciplinary Graduate School of Science and Engineering, Tokyo Institute of 12 Technology, Nagatsuta, Midori-ku, Yokohama, Japan 13 14 Key Words: Cyanidioschyzon merolae; luciferase; nitrogen; reporter assay; transcription 15 factor 16 *To whom correspondence should be addressed. E-mail: [email protected] (K. 17 Tanaka); [email protected] (S. Imamura) 18 The firefly luciferase (Luc) reporter assay is a powerful tool used to analyze promoter 19 activities in living cells. In this report, we established a firefly Luc reporter assay system in 20 the unicellular model red alga Cyanidioschyzon merolae. A nitrite reductase (NIR) promoter- 21 Luc fusion gene was integrated into the URA5.3 genomic region to construct the C. merolae 22 NIR-Luc strain. Luc activities in the NIR-Luc strain were increased, correlating with the 23 accumulation of endogenous NIR transcripts in response to nitrogen depletion. -
RED ALGAE · RHODOPHYTA Rhodophyta Are Cosmopolitan, Found from the Artic to the Tropics
RED ALGAE · RHODOPHYTA Rhodophyta are cosmopolitan, found from the artic to the tropics. Although they grow in both marine and fresh water, 98% of the 6,500 species of red algae are marine. Most of these species occur in the tropics and sub-tropics, though the greatest number of species is temperate. Along the California coast, the species of red algae far outnumber the species of green and brown algae. In temperate regions such as California, red algae are common in the intertidal zone. In the tropics, however, they are mostly subtidal, growing as epiphytes on seagrasses, within the crevices of rock and coral reefs, or occasionally on dead coral or sand. In some tropical waters, red algae can be found as deep as 200 meters. Because of their unique accessory pigments (phycobiliproteins), the red algae are able to harvest the blue light that reaches deeper waters. Red algae are important economically in many parts of the world. For example, in Japan, the cultivation of Pyropia is a multibillion-dollar industry, used for nori and other algal products. Rhodophyta also provide valuable “gums” or colloidal agents for industrial and food applications. Two extremely important phycocolloids are agar (and the derivative agarose) and carrageenan. The Rhodophyta are the only algae which have “pit plugs” between cells in multicellular thalli. Though their true function is debated, pit plugs are thought to provide stability to the thallus. Also, the red algae are unique in that they have no flagellated stages, which enhance reproduction in other algae. Instead, red algae has a complex life cycle, with three distinct stages. -
METABOLIC EVOLUTION in GALDIERIA SULPHURARIA By
METABOLIC EVOLUTION IN GALDIERIA SULPHURARIA By CHAD M. TERNES Bachelor of Science in Botany Oklahoma State University Stillwater, Oklahoma 2009 Submitted to the Faculty of the Graduate College of the Oklahoma State University in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY May, 2015 METABOLIC EVOLUTION IN GALDIERIA SUPHURARIA Dissertation Approved: Dr. Gerald Schoenknecht Dissertation Adviser Dr. David Meinke Dr. Andrew Doust Dr. Patricia Canaan ii Name: CHAD M. TERNES Date of Degree: MAY, 2015 Title of Study: METABOLIC EVOLUTION IN GALDIERIA SULPHURARIA Major Field: PLANT SCIENCE Abstract: The thermoacidophilic, unicellular, red alga Galdieria sulphuraria possesses characteristics, including salt and heavy metal tolerance, unsurpassed by any other alga. Like most plastid bearing eukaryotes, G. sulphuraria can grow photoautotrophically. Additionally, it can also grow solely as a heterotroph, which results in the cessation of photosynthetic pigment biosynthesis. The ability to grow heterotrophically is likely correlated with G. sulphuraria ’s broad capacity for carbon metabolism, which rivals that of fungi. Annotation of the metabolic pathways encoded by the genome of G. sulphuraria revealed several pathways that are uncharacteristic for plants and algae, even red algae. Phylogenetic analyses of the enzymes underlying the metabolic pathways suggest multiple instances of horizontal gene transfer, in addition to endosymbiotic gene transfer and conservation through ancestry. Although some metabolic pathways as a whole appear to be retained through ancestry, genes encoding individual enzymes within a pathway were substituted by genes that were acquired horizontally from other domains of life. Thus, metabolic pathways in G. sulphuraria appear to be composed of a ‘metabolic patchwork’, underscored by a mosaic of genes resulting from multiple evolutionary processes. -
Red Algae (Bangia Atropurpurea) Ecological Risk Screening Summary
Red Algae (Bangia atropurpurea) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, February 2014 Revised, March 2016, September 2017, October 2017 Web Version, 6/25/2018 1 Native Range and Status in the United States Native Range From NOAA and USGS (2016): “Bangia atropurpurea has a widespread amphi-Atlantic range, which includes the Atlantic coast of North America […]” Status in the United States From Mills et al. (1991): “This filamentous red alga native to the Atlantic Coast was observed in Lake Erie in 1964 (Lin and Blum 1977). After this sighting, records for Lake Ontario (Damann 1979), Lake Michigan (Weik 1977), Lake Simcoe (Jackson 1985) and Lake Huron (Sheath 1987) were reported. It has become a major species of the littoral flora of these lakes, generally occupying the littoral zone with Cladophora and Ulothrix (Blum 1982). Earliest records of this algae in the basin, however, go back to the 1940s when Smith and Moyle (1944) found the alga in Lake Superior tributaries. Matthews (1932) found the alga in Quaker Run in the Allegheny drainage basin. Smith and 1 Moyle’s records must have not resulted in spreading populations since the alga was not known in Lake Superior as of 1987. Kishler and Taft (1970) were the most recent workers to refer to the records of Smith and Moyle (1944) and Matthews (1932).” From NOAA and USGS (2016): “Established where recorded except in Lake Superior. The distribution in Lake Simcoe is limited (Jackson 1985).” From Kipp et al. (2017): “Bangia atropurpurea was first recorded from Lake Erie in 1964. During the 1960s–1980s, it was recorded from Lake Huron, Lake Michigan, Lake Ontario, and Lake Simcoe (part of the Lake Ontario drainage). -
Xylans of Red and Green Algae: What Is Known About Their Structures and How They Are Synthesised?
polymers Review Xylans of Red and Green Algae: What Is Known about Their Structures and How They Are Synthesised? Yves S.Y. Hsieh 1,* and Philip J. Harris 2,* 1 Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, SE-106 91 Stockholm, Sweden 2 School of Biological Science, The University of Auckland, Private Bag 92019, Auckland, New Zealand * Correspondence: [email protected] (Y.S.Y.H.); [email protected] (P.J.H.); Tel.: +46-8-790-9937 (Y.S.Y.H.); +64-9-923-8366 (P.J.H.) Received: 30 January 2019; Accepted: 17 February 2019; Published: 18 February 2019 Abstract: Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae (Rhodophyta). Substituted 1,4-β-D-xylans, similar to those in land plants (embryophytes), occur in the cell wall matrix of advanced orders of charophyte green algae. Small proportions of 1,4-β-D-xylans have also been found in the cell walls of some chlorophyte green algae and red algae but have not been well characterised. 1,3-β-D-Xylans occur as triple helices in microfibrils in the cell walls of chlorophyte algae in the order Bryopsidales and of red algae in the order Bangiales. 1,3;1,4-β-D-Xylans occur in the cell wall matrix of red algae in the orders Palmariales and Nemaliales. In the angiosperm Arabidopsis thaliana, the gene IRX10 encodes a xylan 1,4-β-D-xylosyltranferase (xylan synthase), and, when heterologously expressed, this protein catalysed the production of the backbone of 1,4-β-D-xylans. -
The Global Dispersal of the Non-Endemic Invasive Red Alga Gracilariavermiculophylla in the Ecosystems of the Euro-Asia Coastal W
Review Article Oceanogr Fish Open Access J Volume 8 Issue 1 - July 2018 Copyright © All rights are reserved by Vincent van Ginneken DOI: 10.19080/OFOAJ.2018.08.555727 The Global Dispersal of the Non-Endemic Invasive Red Alga Gracilaria vermiculophylla in the Ecosystems of the Euro-Asia Coastal Waters Including the Wadden Sea Unesco World Heritage Coastal Area: Awful or Awesome? Vincent van Ginneken* and Evert de Vries Bluegreentechnologies, Heelsum, Netherlands Submission: September 05, 2017; Published: July 06, 2018 Corresponding author: Vincent van Ginneken, Bluegreentechnologies, Heelsum, Netherlands, Email: Abstract Gracilaria vermiculophylla (Ohmi) Papenfu ß 1967 (Rhodophyta, Gracilariaceae) is a red alga and was originally described in Japan in 1956 as Gracilariopsis vermiculophylla G. vermiculophylla is primarily used as a precursor for agar, which is widely used in the pharmaceutical and food industries. It has been introduced to the East . It is thought to be native and widespread throughout the Northwest Pacific Ocean. temperature) and can grow in an extremely wide variety of conditions; factors which contribute to its invasiveness. It invades estuarine areas Pacific, the West Atlantic and the East Atlantic, where it rapidly colonizes new environments. It is highly tolerant of stresses (nutrient, salinity, invaded: Atlantic, North Sea, Mediterranean and Baltic Sea. The Euro-Asian brackish Black-Sea have not yet been invaded but are very vulnerable towhere intense it out-competes invasion with native G. vermiculophylla algae species and modifies environments. The following European coastal and brackish water seas are already G. vermiculophylla among the most potent invaders out of 114 non-indigenous because they macro-algae are isolated species from indirect Europe. -
(Rhodophyta, Gracilariales) in Hog Island Bay, Virginia: a Cryptic Alien and Invasive Macroalga and Taxonomic Correction1
J. Phycol. 42, 139–141 (2005) r 2005 Phycological Society of America DOI: 10.1111/j.1529-8817.2005.00160.x NOTE GRACILARIA VERMICULOPHYLLA (RHODOPHYTA, GRACILARIALES) IN HOG ISLAND BAY, VIRGINIA: A CRYPTIC ALIEN AND INVASIVE MACROALGA AND TAXONOMIC CORRECTION1 Mads Solgaard Thomsen2 Department of Applied Sciences, Auckland University of Technology, Auckland, New Zealand Carlos Frederico Deluqui Gurgel, Suzanne Fredericq Department of Biology, University of Louisiana at Lafayette, P.O. Box 42451, Lafayette, Louisiana 70504-2451, USA and Karen J. McGlathery Department of Environmental Sciences, Clark Hall, University of Virginia, Charlottesville, Virginia 22903, USA Gracilaria in Virginia, USA, is abundant and Lachlan and Bird 1986). Unfortunately, in many cases, composed of thalli either having relatively flat or Gracilaria species are difficult to identify based on mor- cylindrical branches. These two morphologies were phological features (Oliveira et al. 2000, Gurgel and referred to previously as G. foliifera (Forsska˚l) Fredericq 2004). Given these difficulties and new pos- Bgesen and G. verrucosa (Hudson) Papenfuss. sibilities of accurate identification by molecular biology However, G. verrucosa is regarded an invalid techniques, Gracilaria sensu lato species are regularly name, and the flat specimens are now referred to as changing taxonomic status (Bird and Rice 1990, Bell- G. tikvahiae McLachlan. This has created confusion orin et al. 2002, Gurgel and Fredericq 2004, Gurgel about the nomenclature of Gracilaria from this re- et al. 2004). gion. Here we document that the cylindrical form Gracilaria is a particularly important genus in Vir- that dominates Hog Island Bay, Virginia, is ginia, USA, where it is abundant in lagoons and estu- G. -
Evolutionary History and the Life Cycle of Seaweeds
Evolutionary history and the life cycle of seaweeds Evolution Technical and As discussed near the beginning of this book, the impact of algae on the global scientific details ecosystem is enormous. It is estimated that they are currently responsible for about 90% of the oxygen that is released into the atmosphere. Furthermore, their contribution to the physical conditions on Earth were vitally important in setting the stage for the evolution of higher organisms. The first signs of life on our planet date back to a time when it was still very young. Earth was formed about 4.5 billion years ago and it is thought that the earliest organisms had already appeared more than 3.8 billion years ago. During this period, the conditions on Earth were very different from those of today. A particular indication of the physical state of the planet was the nearly total absence of oxygen in the atmosphere, less than one part in ten billion. Life consisted of simple, unicellular organisms, the so-called prokaryotes, which most closely resemble present-day bacteria. The prokaryotes encom- pass two separate domains (or superkingdoms): the Bacteria and the Archaea. Y, ffThe evolution of microal- Earth is formed Present day gae and macroalgae on Earth. 4 3 2 1 0 The thick lines indicate times Blue-green microalgae during which there was a rapid ■ increase in the occurrence of ■ Brown algae these species. Macroalgae became prevalent about 500 ■ Red algae to 800 million years ago. ■ Green algae About 2.5 to 1.5 billion years ago, there was a noticeable change in the Earth’s atmosphere, as the amount of oxygen in it started to increase. -
Safety Assessment of Red Algae-Derived Ingredients As Used in Cosmetics
Safety Assessment of Red Algae-Derived Ingredients as Used in Cosmetics Status: Draft Report for Panel Review Release Date: August 21, 2020 Panel Meeting Date: September 14 – 15, 2020 The Expert Panel for Cosmetic Ingredient Safety members are: Chair, Wilma F. Bergfeld, M.D., F.A.C.P.; Donald V. Belsito, M.D.; Curtis D. Klaassen, Ph.D.; Daniel C. Liebler, Ph.D.; James G. Marks, Jr., M.D.; Lisa A. Peterson, Ph.D.; Ronald C. Shank, Ph.D.; Thomas J. Slaga, Ph.D.; and Paul W. Snyder, D.V.M., Ph.D. The Cosmetic Ingredient Review (CIR) Executive Director is Bart Heldreth, Ph.D. This safety assessment was prepared by Priya Cherian, Scientific Analyst/Writer, CIR. © Cosmetic Ingredient Review 1620 L Street, NW, Suite 1200 ♢ Washington, DC 20036-4702 ♢ ph 202.331.0651 ♢ fax 202.331.0088 ♢ [email protected] Algal diversity and application. Rex L. Lowe Bowling Green State University Presentation Roadmap What are these things called algae? Species diversity & properties Ecosystem services, Ecosystem hazards Algal communities might look homogeneous but are very complex A stone this size may contain hundreds of species in a very complex community. A complex community of epilithic algae A complex community of epiphytic algae on Cladophora Ra = Rhoicosphenia abbreviata Esp = Epithemia sp. Es = Epithemia sorex Am = Achnanthidium minutissimum Cp = Cocconeis pediculus Cpl = Cocconeis placentula C = Cladophora What are algae? Algos = Latin seaweed Phycos = Greek seaweed ♦Thalloid organisms bearing chlorophyll a, lacking multicellular gametangia and their colorless relatives. ♦Morphologically diverse: ♦Prokaryotes, mesokaryotes, eukaryotes ♦Largest to smallest phototrophs (0.5µm-220 m) ♦Physiologically diverse: autotrophs, facultative heterotrophs, obligate heterotrophs (molecules or particles), parasites). -
A Morphological and Phylogenetic Study of the Genus Chondria (Rhodomelaceae, Rhodophyta)
Title A morphological and phylogenetic study of the genus Chondria (Rhodomelaceae, Rhodophyta) Author(s) Sutti, Suttikarn Citation 北海道大学. 博士(理学) 甲第13264号 Issue Date 2018-06-29 DOI 10.14943/doctoral.k13264 Doc URL http://hdl.handle.net/2115/71176 Type theses (doctoral) File Information Suttikarn_Sutti.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP A morphological and phylogenetic study of the genus Chondria (Rhodomelaceae, Rhodophyta) 【紅藻ヤナギノリ属(フジマツモ科)の形態学的および系統学的研究】 Suttikarn Sutti Department of Natural History Sciences, Graduate School of Science Hokkaido University June 2018 1 CONTENTS Abstract…………………………………………………………………………………….2 Acknowledgement………………………………………………………………………….5 General Introduction………………………………………………………………………..7 Chapter 1. Morphology and molecular phylogeny of the genus Chondria based on Japanese specimens……………………………………………………………………….14 Introduction Materials and Methods Results and Discussions Chapter 2. Neochondria gen. nov., a segregate of Chondria including N. ammophila sp. nov. and N. nidifica comb. nov………………………………………………………...39 Introduction Materials and Methods Results Discussions Conclusion Chapter 3. Yanagi nori—the Japanese Chondria dasyphylla including a new species and a probable new record of Chondria from Japan………………………………………51 Introduction Materials and Methods Results Discussions Conclusion References………………………………………………………………………………...66 Tables and Figures 2 ABSTRACT The red algal tribe Chondrieae F. Schmitz & Falkenberg (Rhodomelaceae, Rhodophyta) currently