Systematics of the Atlantic–Mediterranean Soles Pegusa Impar, P
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BROODSTOCK NUTRITION: ARACHIDONIC ACID (20:4N-6, ARA) and REPRODUCTIVE PHYSIOLOGY
SENEGALESE SOLE (SOLEA SENEGALENSIS) BROODSTOCK NUTRITION: ARACHIDONIC ACID (20:4n-6, ARA) AND REPRODUCTIVE PHYSIOLOGY Fernando Norambuena Filcun IRTA Institute for Food and Agricultural Research and Technology Center of Sant Carles de la Ràpita Catalonia, Spain Thesis supervisor: Neil Duncan SENEGALESE SOLE (SOLEA SENEGALENSIS) BROODSTOCK NUTRITION: ARACHIDONIC ACID (ARA, 20:4n-6) AND REPRODUCTIVE PHYSIOLOGY Fernando Norambuena Filcun Thesis Submitted in fulfilment of the requirements for the degree of doctor at Autonomous University of Barcelona by the authority of the rector Ana Ripoll Aracil in the presence of the Thesis Committee appointed by the Academic Board Index Abstract…………………………..…………….1 I. General introduction II. Lipids and fatty acid in S. Sole 1. Lipids and fatty acids in fish…………....….5 Abstract……………………….……….21 2. Essential fatty acids (EFAs)….……….…....5 1. Introduction………………….……22 3. Biosynthesis of fatty acids……………....…5 2. Materials and methods……......…...24 4. Senegalese sole and aquaculture…….....…..7 3. Results…………………….....……27 5. Senegalese sole reproduction………….…...8 4. Discussion…………….........……..40 6. Nutrition and reproductive physiology.........9 7. Hypothesis and aims…………………........12 5. Conclusion……………….….….....44 8. References……………………………........12 6. Acknowledgments……….….….....44 7. References…………………..….....45 III. PGs and COX-2 in S. Sole IV. ARA in blood and S. Sole physiology Abstract………………………………...............53 Abstract………………………..…..…77 1. Introduction……………………………......53 1. Introduction……………...….....…77 -
FAMILY Soleidae Bonaparte, 1833
FAMILY Soleidae Bonaparte, 1833 - true soles [=Soleini, Synapturiniae (Synapturinae), Brachirinae, Heteromycterina, Pardachirinae, Aseraggodinae, Aseraggodinae] Notes: Soleini Bonaparte 1833: Fasc. 4, puntata 22 [ref. 516] (subfamily) Solea Synapturniae [Synapturinae] Jordan & Starks, 1906:227 [ref. 2532] (subfamily) Synaptura [von Bonde 1922:21 [ref. 520] also used Synapturniae; stem corrected to Synaptur- by Jordan 1923a:170 [ref. 2421], confirmed by Chabanaud 1927:2 [ref. 782] and by Lindberg 1971:204 [ref. 27211]; senior objective synonym of Brachirinae Ogilby, 1916] Brachirinae Ogilby, 1916:136 [ref. 3297] (subfamily) Brachirus Swainson [junior objective synonym of Synapturinae Jordan & Starks, 1906, invalid, Article 61.3.2] Heteromycterina Chabanaud, 1930a:5, 20 [ref. 784] (section) Heteromycteris Pardachirinae Chabanaud, 1937:36 [ref. 793] (subfamily) Pardachirus Aseraggodinae Ochiai, 1959:154 [ref. 32996] (subfamily) Aseraggodus [unavailable publication] Aseraggodinae Ochiai, 1963:20 [ref. 7982] (subfamily) Aseraggodus GENUS Achiroides Bleeker, 1851 - true soles [=Achiroides Bleeker [P.], 1851:262, Eurypleura Kaup [J. J.], 1858:100] Notes: [ref. 325]. Masc. Plagusia melanorhynchus Bleeker, 1851. Type by monotypy. Apparently appeared first as Achiroïdes melanorhynchus Blkr. = Plagusia melanorhynchus Blkr." Species described earlier in same journal as P. melanorhynchus (also spelled melanorhijnchus). Diagnosis provided in Bleeker 1851:404 [ref. 6831] in same journal with second species leucorhynchos added. •Valid as Achiroides Bleeker, 1851 -- (Kottelat 1989:20 [ref. 13605], Roberts 1989:183 [ref. 6439], Munroe 2001:3880 [ref. 26314], Kottelat 2013:463 [ref. 32989]). Current status: Valid as Achiroides Bleeker, 1851. Soleidae. (Eurypleura) [ref. 2578]. Fem. Plagusia melanorhynchus Bleeker, 1851. Type by being a replacement name. Unneeded substitute for Achiroides Bleeker, 1851. •Objective synonym of Achiroides Bleeker, 1851 -- (Kottelat 2013:463 [ref. -
Soleidae, Pleuronectiformes) from the Gulf of Ca´Diz (Spain) Based on Mitochondrial DNA Sequences
Mar. Biotechnol. 6, 612–624, 2004 DOI: 10.1007/s10126-004-3081-6 Ó 2005 Springer Science+Business Media, Inc. Phylogenetic Relationships Among Ten Sole Species (Soleidae, Pleuronectiformes) from the Gulf of Ca´diz (Spain) Based on Mitochondrial DNA Sequences Carlos Infante, Gaetano Catanese, and Manuel Manchado Laboratorio de Identificacio´n de Especies Pesqueras y Acuı´colas, C.I.F.P.A. ‘‘El Torun˜o,’’ Consejerı´a de Innovacı´on, Ciencia y Empresa, Junta de Andalucı´a, 11500 El Puerto de Santa Marı´a, Ca´diz, Spain Abstract: The entire sequence of the mitochondrial cytochrome b gene and 2 partial sequences of the ribo- somal RNA12S and 16S genes have been used to study the molecular phylogeny in 10 species of soles belonging to the genera Solea, Monochirus, Microchirus, Dicologlossa, and Synaptura from the Atlantic waters of the Gulf of Ca´diz (Spain). The results obtained by means of different phylogenetic analyses (maximum likelihood, maximum parsimony, and neighbor-joining) were quite similar, supporting the monophyly of the Solea species. Nevertheless, they favor the differentiation of Dicologlossa cuneata and Dicologlossa hexophthalma in 2 distinct genera, since the most closely related species to the last one is Microchirus azevia. The fact that M. azevia is also more closely linked to Monochirus hispidus than to its congeneric Microchirus boscanion argues in favor of a taxonomic reorganization of these genera. Key words: Soleidae, Pleuronectiformes, phylogeny, Solea, Dicologlossa, cytochrome b. INTRODUCTION (Que´ro et al., 1986). Seven genera with 17 different species are distributed in the northeastern Atlantic and the Medi- Soleidae are benthic flatfishes that share several morpho- terranean (Que´ro et al., 1986). -
Bibliografia
Bibliografía BIBLIOGRAFIA ADAMS, C.A. (1996) Flavours and sweeteners - simple function, complex structure. Feed Mix. 5: 3: 8-11. ADRON, J.W. (1972) A design for automatic and demand feeders for experimental fish. J. Cons. Int. Explor. Mer, 34:300-305. ADRON, J.W. & A.M. MACKIE (1978) Studies on the chemical nature of feeding stimulants for rainbow trout, Salmo gairdneri Richardson. J. Fish Biol., 12: 303-310. ADRON, J.W., P.T. GRANT & C.B. COWEY (1973) A system of quantitative study of learning capacity of rainbow trout and its application to the study of food preferences and behaviour. J. Fish Biol. 5: 625-636. ALANÄRÄ, A. & E. BRÄNNÄS (1993) A test of the individual feeding activity and food size preference in rainbow trout using demand feeders. Aquaculture International, 1: 47-54. ALDERSON, R. (1979) The effect of ammonia on the growth of juvenile Dover sole, Solea solea (L.) and turbot, Scophthalmus maximus (L.) Aquaculture, 17: 291-309. AMBROSIO, P.P. & R. FLOS (2000) Effect of enzyme enriched feed on the endogenous trypsin daily secretion in Solea senegalensis. En FLOS, R. & L. CRESWELL (Eds.) Responsible Aquaculture for the new millennium. AQUA 2000 (Nice, France, May 2-6 2000) E.A.S. Special Publication n. 28: pp. 23. ANDRADE, J.P. (1989) The flatfishes of the Ria Formosa, southern Portugal: results of a three-year survey. Sci. Mar. 53 (2): 671-676. ANDRADE, J.P. (1992) Age, growth and population structure of Solea senegalensis Kaup 1858 (Pisces, Soleidae) in the Ria Formosa (Algarve, Portugal). Sci. Mar. 56 (1): 35-41. -
Evidence for a Robertsonian Fusion in Solea Senegalensis (Kaup, 1858) Revealed by Zoo- FISH and Comparative Genome Analysis Aglaya García-Angulo1, Manuel A
García-Angulo et al. BMC Genomics (2018) 19:818 https://doi.org/10.1186/s12864-018-5216-6 RESEARCH ARTICLE Open Access Evidence for a Robertsonian fusion in Solea senegalensis (Kaup, 1858) revealed by zoo- FISH and comparative genome analysis Aglaya García-Angulo1, Manuel A. Merlo1, Silvia Portela-Bens1, María E. Rodríguez1, Emilio García1, Ahmed Al-Rikabi2, Thomas Liehr2 and Laureana Rebordinos1* Abstract Background: Solea senegalensis (Kaup, 1858) is a commercially important flatfish species, belonging to the Pleuronectiformes order. The taxonomy of this group has long been controversial, and the karyotype of the order presents a high degree of variability in diploid number, derived from chromosomal rearrangements such as Robertsonian fusions. Previously it has been proposed that the large metacentric chromosome of S. senegalensis arises from this kind of chromosome rearrangement and that this is a proto-sex chromosome. Results: In this work, the Robertsonian origin of the large metacentric chromosome of S. senegalensis has been tested by the Zoo-FISH technique applied to two species of the Soleidae family (Dicologlossa cuneata and Dagetichthys lusitanica), and by comparative genome analysis with Cynoglossus semilaevis. From the karyotypic analysis we were able to determine a chromosome complement comprising 2n = 50 (FN = 54) in D. cuneata and 2n = 42 (FN = 50) in D. lusitanica. The large metacentric painting probe gave consistent signals in four acrocentric chromosomes of the two Soleidae species; and the genome analysis proved a common origin with four chromosome pairs of C. semilaevis.Asa result of the genomic analysis, up to 61 genes were annotated within the thirteen Bacterial Artificial Chromosome clones analysed. -
Survival Rates of Common Sole (Solea Solea L.) Captured by Gill Nets and Trawl from İzmir Bay; Adaptation to Culture Conditions and Feeding Behavior
E.Ü. Su Ürünleri Dergisi 2008 © Ege University Press E.U. Journal of Fisheries & Aquatic Sciences 2008 ISSN 1300 - 1590 Cilt/Volume 25, Sayı/Issue (1): 57–61 http://jfas.ege.edu.tr/ Research Note / Araştırma Notu Survival Rates of Common Sole (Solea solea L.) Captured by Gill Nets and Trawl from İzmir Bay; Adaptation to Culture Conditions and Feeding Behavior *Fatih Başaran1, Berkan Aydoğan2, Şükrü Şenol Paruğ1, Gülnur Metin1, Ali Ulaş1, Hülya Saygı1, Bora Sezen2, Belgin Hoşsucu1 1Ege University, Fisheries Faculty, 35440, Urla, İzmir, Turkey 2Kılıç Groups of Company, Güvercinlik, Muğla, Turkey *E mail: [email protected] Özet: Trol ve uzatma ağları ile İzmir körfezinden yakalanan dil (Solea solea) balığının yaşama yüzdesi; kültür şartlarına adaptasyonu ve beslenme davranışı. Bu araştırmada, doğal ortamdan yakalanan dil balığının (Solea solea), kültür şartlarına adaptasyonu ve beslenme davranışı incelenmiştir. Dil balıkları, 2007 Mart-Nisan döneminde, İzmir Körfezi’nden trol ve uzatma ağlarıyla yakalanmıştır. 270 adet dil balığının ön adaptasyonu sırasında, ilk beş gün boyunca, karanlık ortamda antibiyotik (100 ppm fruzolidon ilavesi, 60 dak/gün) uygulaması gerçekleştirilmiştir. Kültür şartlarında ilk besleme için, kalamar (Loligo vulgaris), boru kurdu (Diopatra neopolitana), kara midye (Mytilus galloprovincialis), sülünes (Solen marginatus), istiridye (Ostrea edulis), japon şapkası (Patella spp.), deniz salyangozu (Monodonta turbinata) ve taze sardalya (Sardina pilchardus) kullanılmıştır. Dil balıkları 0-2 gün içinde beslenmeye başlamıştır ve boru kurdu, en çok tercih ettikleri tür olmuştur. Bir aylık adaptasyon dönemi sonunda, uzatma ağlarıyla yakalanan dil balıklarının yaşama oranının (%58), trol ile yakalananların yaşama oranından (%29) önemli düzeyde yüksek bulunmuştur (p <0.05). Anahtar Kelimeler: Dil, yaşama yüzdesi, adaptasyon, beslenme davranışı. -
Stylianos Somarakis2, Gary R
Supporting information about the effect of energy acquisition and allocation on egg production in relation to reproductive strategies of 39 fishes (species synopses). Richard S. McBride1, Stylianos Somarakis2, Gary R. Fitzhugh3, Anu Albert4, Nathalia A. Yaragina5, Mark J. Wuenschel1, Alexandre Alonso-Fernández6, Gualtiero Basilone7. 1 National Marine Fisheries Service, Northeast Fisheries Science Center, 166 Water Street, Woods Hole MA 02543, USA 2 Hellenic Centre for Marine Research, P.O. Box 2214, Heraklion 71003, Crete, Greece 3 National Marine Fisheries Service, Southeast Fisheries Science Center, Panama City, FL 32408, USA 4 Estonian Marine Institute, University of Tartu, Vanemuise 46, 51014 Tartu, Estonia 5 Polar Research Institute of Marine Fisheries and Oceanography, 6 Knipovich St., Murmansk, 183038, Russia 6 Instituto de Investigaciones Marinas, Consejo Superior de Investigaciones Científicas, IIM- CSIC, c/ Eduardo Cabello 6, 36208 Vigo (Pontevedra) Spain 7 Consiglio Nazionale delle Ricerche Istituto Ambiente Marino Costiero UOS Mazara (CNR- IAMC), Via L. Vaccara, n°61, 91026 Mazara del Vallo (Tp), Italy Correspondence: R S McBride, National Marine Fisheries Service, Northeast Fisheries Science Center, 166 Water Street, Woods Hole, MA 02543, USA; Tel.: +508 495 2244; Fax.: +508 495 2115; Email: [email protected] 1 TABLE OF CONTENTS INTRODUCTION .......................................................................................................................... 3 SPECIES SYNOPSES ................................................................................................................... -
FAO. 2018. the State of World Fisheries and Aquaculture 2018 - Meeting the Sustainable Development Goals
2018 2018 2018 2018 THE STATE OF WORLD FISHERIES AND AQUACULTURE MEETING THE SUSTAINABLE DEVELOPMENT GOALS This flagship publication is part of THE STATE OF THE WORLD series of the Food and Agriculture Organization of the United Nations. Recommended citation: FAO. 2018. The State of World Fisheries and Aquaculture 2018 - Meeting the sustainable development goals. Rome. Licence: CC BY-NC-SA 3.0 IGO. The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. ISBN 978-92-5-130562-1 © FAO 2018 Some rights reserved. This work is made available under the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 IGO licence (CC BY-NC-SA 3.0 IGO; https://creativecommons.org/licenses/by-nc-sa/3.0/igo). Under the terms of this licence, this work may be copied, redistributed and adapted for non-commercial purposes, provided that the work is appropriately cited. In any use of this work, there should be no suggestion that FAO endorses any specific organization, products or services. The use of the FAO logo is not permitted. -
Irish Biodiversity: a Taxonomic Inventory of Fauna
Irish Biodiversity: a taxonomic inventory of fauna Irish Wildlife Manual No. 38 Irish Biodiversity: a taxonomic inventory of fauna S. E. Ferriss, K. G. Smith, and T. P. Inskipp (editors) Citations: Ferriss, S. E., Smith K. G., & Inskipp T. P. (eds.) Irish Biodiversity: a taxonomic inventory of fauna. Irish Wildlife Manuals, No. 38. National Parks and Wildlife Service, Department of Environment, Heritage and Local Government, Dublin, Ireland. Section author (2009) Section title . In: Ferriss, S. E., Smith K. G., & Inskipp T. P. (eds.) Irish Biodiversity: a taxonomic inventory of fauna. Irish Wildlife Manuals, No. 38. National Parks and Wildlife Service, Department of Environment, Heritage and Local Government, Dublin, Ireland. Cover photos: © Kevin G. Smith and Sarah E. Ferriss Irish Wildlife Manuals Series Editors: N. Kingston and F. Marnell © National Parks and Wildlife Service 2009 ISSN 1393 - 6670 Inventory of Irish fauna ____________________ TABLE OF CONTENTS Executive Summary.............................................................................................................................................1 Acknowledgements.............................................................................................................................................2 Introduction ..........................................................................................................................................................3 Methodology........................................................................................................................................................................3 -
Hox Genes Polymorphism Depicts Developmental Disruption of Common Sole Eggs
Open Life Sci. 2019; 14: 549–563 Research Article Menelaos Kavouras*, Emmanouil E. Malandrakis, Theodoros Danis, Ewout Blom, Konstantinos Anastassiadis, Panagiota Panagiotaki, Athanasios Exadactylos* Hox genes polymorphism depicts developmental disruption of common sole eggs https://doi.org/10.1515/biol-2019-0061 Received May 30, 2019; accepted November 22, 2019 1 Introduction Abstract: In sole aquaculture production, consistency In aquaculture industry, Solea solea is considered as in the quality of produced eggs throughout the year is one of the most interesting and promising species for unpredictable. Hox genes have a crucial role in controlling marine fish farming in Europe due to high market value embryonic development and their genetic variation could and consumers demand. Rearing is mainly based on alter the phenotype dramatically. In teleosts genome controlled reproduction of captive breeders [1]. The steady duplication led paralog hox genes to become diverged. production of eggs either in quality and quantity all year Direct association of polymorphism in hoxa1a, hoxa2a & round is necessary for successful mass production of hoxa2b of Solea solea with egg viability indicates hoxa2b juveniles [2, 3]. Despite the progress that has been achieved as a potential genetic marker. High Resolution Melt (HRM) all these years on the rearing and welfare conditions of analysis was carried out in 52 viable and 61 non-viable eggs sole spawners [1, 3–7], manipulated broodstocks are still collected at 54±6 hours post fertilization (hpf). Allelic and producing eggs which present variability both in quantity genotypic frequencies of polymorphism were analyzed and quality, boosting the overall production cost of sole and results illustrated a significantly increased risk for [8]. -
A Comprehensive Integrated Genetic Map of the Complete Karyotype of Solea Senegalensis (Kaup 1858)
G C A T T A C G G C A T genes Article A Comprehensive Integrated Genetic Map of the Complete Karyotype of Solea senegalensis (Kaup 1858) Manuel A. Merlo, Silvia Portela-Bens, María E. Rodríguez , Aglaya García-Angulo, Ismael Cross, Alberto Arias-Pérez, Emilio García and Laureana Rebordinos * Genetics Area, Faculty of Marine and Environmental Sciences, INMAR, University of Cadiz, 11510 Cádiz, Spain; [email protected] (M.A.M.); [email protected] (S.P.-B.); [email protected] (M.E.R.); [email protected] (A.G.-A.); [email protected] (I.C.); [email protected] (A.A.-P.); [email protected] (E.G.) * Correspondence: [email protected] Abstract: Solea senegalensis aquaculture production has experienced a great increase in the last decade and, consequently, the genome knowledge of the species is gaining attention. In this sense, obtaining a high-density genome mapping of the species could offer clues to the aquaculture improvement in those aspects not resolved so far. In the present article, a review and new processed data have allowed to obtain a high-density BAC-based cytogenetic map of S. senegalensis beside the analysis of the sequences of such BAC clones to achieve integrative data. A total of 93 BAC clones were used to localize the chromosome complement of the species and 588 genes were annotated, thus almost reaching the 2.5% of the S. senegalensis genome sequences. As a result, important data about its genome organization and evolution were obtained, such as the lesser gene density of the large metacentric pair compared with the other metacentric chromosomes, which supports the theory of a sex proto-chromosome pair. -
Reproductive Biology of the Common Sole, Solea Solea in Southern East Mediterranean, Bardawil Lagoon, Egypt Attia A. O. El- Aiat
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(1): 403 - 411 (2019) www.ejabf.journals.ekb.eg Reproductive Biology of the Common Sole, Solea solea in Southern East Mediterranean, Bardawil Lagoon, Egypt Attia A. O. El- Aiatt, Kariman A. Sh. Shalloof and Alaa M. El- Far Fisheries Division, National Institute of Oceanography and Fisheries, Egypt ARTICLE INFO ABSTRACT Article History: Annual production of soles in Bardawil Lagoon was gradually Received: Jan. 25, 2019 decreased from 343 MT in 2008 to be 161 MT in 2016. This work aims to Accepted: March 19, 2019 investigate reproductive biology of the common sole, Solea solea, to Online: March 30, 2019 provide biological base for management of its fisheries in Bardawil _______________ Lagoon, North Sinai, Egypt. Monthly samples of S. solea were collected from the commercial catch in different landing sites of the lagoon during Keywords: 2016-2017. The length-weight relation was found as W= 0.0055 L3.171, W= Solea solea 0.0047 L2.334 and W= 0.0048 L3.2215 for males, females and combined sexes Bardawil Lagoon respectivly. Generally, low values of condition factors were recorded in Mediterranean June and July, and the highest value was recorded in December. Gonado- Reproduction Somatic Index (GSI) of females showed that S. solea spawn during Management November, December and January since GSI peaked in these months Fisheries (6.77, 8.72 and 8.48 % respectively). The lowest value of GSI of females was recorded in August (1.09%). Overall sex ratio (males : females) was 1: 1.99 during the period of study.