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Bayesian Analysis of the Astrobiological Implications of Life's
Bayesian analysis of the astrobiological implications of life's early emergence on Earth David S. Spiegel ∗ y, Edwin L. Turner y z ∗Institute for Advanced Study, Princeton, NJ 08540,yDept. of Astrophysical Sciences, Princeton Univ., Princeton, NJ 08544, USA, and zInstitute for the Physics and Mathematics of the Universe, The Univ. of Tokyo, Kashiwa 227-8568, Japan Submitted to Proceedings of the National Academy of Sciences of the United States of America Life arose on Earth sometime in the first few hundred million years Any inferences about the probability of life arising (given after the young planet had cooled to the point that it could support the conditions present on the early Earth) must be informed water-based organisms on its surface. The early emergence of life by how long it took for the first living creatures to evolve. By on Earth has been taken as evidence that the probability of abiogen- definition, improbable events generally happen infrequently. esis is high, if starting from young-Earth-like conditions. We revisit It follows that the duration between events provides a metric this argument quantitatively in a Bayesian statistical framework. By (however imperfect) of the probability or rate of the events. constructing a simple model of the probability of abiogenesis, we calculate a Bayesian estimate of its posterior probability, given the The time-span between when Earth achieved pre-biotic condi- data that life emerged fairly early in Earth's history and that, billions tions suitable for abiogenesis plus generally habitable climatic of years later, curious creatures noted this fact and considered its conditions [5, 6, 7] and when life first arose, therefore, seems implications. -
ATTACHMENT, SELECTION, and TRANSFORMATION of PREBIOTIC MOLECULES on BRUCITE [Mg(OH)2]
ATTACHMENT, SELECTION, AND TRANSFORMATION OF PREBIOTIC MOLECULES ON BRUCITE [Mg(OH)2] AND THE IMPLICATIONS FOR CHEMICAL EVOLUTION AT HYDROTHERMAL SYSTEMS by Charlene F. Estrada A dissertation submitted to The Johns Hopkins University in conformity with the requirements for the degree of Doctor of Philosophy Baltimore, Maryland September, 2014 Charlene F. Estrada All rights reserved Abstract Serpentinite-hosted hydrothermal vents may have been plausible environments for the origins of life. Mineral assemblages within hydrothermal fields may have selected and concentrated biomolecules, although little is known about molecular interactions at these mineral surfaces. I investigated the adsorption of aspartate and ribose at the surface of brucite [Mg(OH)2], a major mineral phase at serpentinite-hosted hydrothermal vents. I characterized the attachment of these molecules onto a synthetic brucite powder with Mg2+ and Ca2+ using batch adsorption experiments. I observed that Mg2+ inhibits both aspartate and ribose adsorption, whereas Ca2+ enhances adsorption onto the brucite surface. I used surface complexation modeling to predict that both aspartate and ribose attach as cooperative calcium-ligand complexes onto brucite. To further investigate the cooperative effect of Ca2+ on biomolecule adsorption, I introduced an equimolar mixture of aspartate, glycine, lysine, leucine, and phenylalanine to the brucite surface, both with and without Ca2+. Without Ca2+, up to 8.9 % aspartate and ~5 % each of the remaining four amino acids adsorbed onto brucite. When Ca2+ was added, I observed that between 5.7 to 20 times more aspartate (37.3 %) adsorbed onto brucite compared with the remaining four amino acids (~3 % each). These results, when combined with the previous study, suggest that aspartate selectively adsorbs onto brucite as a cooperative calcium-aspartate complex. -
51. Astrobiology: the Final Frontier of Science Education
www.astrosociety.org/uitc No. 51 - Summer 2000 © 2000, Astronomical Society of the Pacific, 390 Ashton Avenue, San Francisco, CA 94112. Astrobiology: The Final Frontier of Science Education by Jodi Asbell-Clarke and Jeff Lockwood What (or Whom) Are We Looking For? Where Do We Look? Lessons from Our Past The Search Is On What Does the Public Have to Learn from All This? A High School Curriculum in Astrobiology Astrobiology seems to be all the buzz these days. It was the focus of the ASP science symposium this summer; the University of Washington is offering it as a new Ph.D. program, and TERC (Technical Education Research Center) is developing a high school integrated science course based on it. So what is astrobiology? The NASA Astrobiology Institute defines this new discipline as the study of the origin, evolution, distribution, and destiny of life in the Universe. What this means for scientists is finding the means to blend research fields such as microbiology, geoscience, and astrophysics to collectively answer the largest looming questions of humankind. What it means for educators is an engaging and exciting discipline that is ripe for an integrated approach to science education. Virtually every topic that one deals with in high school science is embedded in astrobiology. What (or Whom) Are We Looking For? Movies and television shows such as Contact and Star Trek have teased viewers with the idea of life on other planets and even in other galaxies. Illustration courtesy of and © 2000 by These fictional accounts almost always deal with intelligent beings that have Kathleen L. -
Is It the First Use of the Word Astrobiology ? Author
Title : Is it the first use of the word Astrobiology ? Author : Danielle Briot Adress : Observatoire de Paris 61 avenue de l’Observatoire 75014 Paris France tel : 33(0)1 40 51 22 39 and 33(0)1 45 07 78 57 [email protected] running title : First use of the word Astrobiology ? 1 Abstract The research of life in Universe is a ancient quest that has taken different forms over the centuries. It has given rise to a new science, which is normally referred as Astrobiology. It is interesting to research when this word was used for the first time and when this science developed to represent the search for life in Universe as is done today. There are records of the usage of the word "Astrobiology" as early as 1935, in an article published in a French popular science magazine. Moreover this article is quite remarkable because its portrayal of the concept of the subject is very similar to that considered today. The author of this paper was Ary J. Sternfeld (1905 - 1980), who was ortherwise known as a poorly respected great pioneer of astronautics. We provide a brief description of his life, which was heavily influenced by the tragic events of the 20th century history, from Poland and France to Russia. He was a prolific scientific writer who wrote a number of very successful scientific books and papers. Keywords : History – Pioneers 2 1. Introduction The question of the life in the Universe, in relation with the question of the multiplicity of worlds, is very ancient and probably dates back to Greek philosophers. -
Evolutionary Processes Transpiring in the Stages of Lithopanspermia Ian Von Hegner
Evolutionary processes transpiring in the stages of lithopanspermia Ian von Hegner To cite this version: Ian von Hegner. Evolutionary processes transpiring in the stages of lithopanspermia. 2020. hal- 02548882v2 HAL Id: hal-02548882 https://hal.archives-ouvertes.fr/hal-02548882v2 Preprint submitted on 5 Aug 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. HAL archives-ouvertes.fr | CCSD, April 2020. Evolutionary processes transpiring in the stages of lithopanspermia Ian von Hegner Aarhus University Abstract Lithopanspermia is a theory proposing a natural exchange of organisms between solar system bodies as a result of asteroidal or cometary impactors. Research has examined not only the physics of the stages themselves but also the survival probabilities for life in each stage. However, although life is the primary factor of interest in lithopanspermia, this life is mainly treated as a passive cargo. Life, however, does not merely passively receive an onslaught of stress from surroundings; instead, it reacts. Thus, planetary ejection, interplanetary transport, and planetary entry are only the first three factors in the equation. The other factors are the quality, quantity, and evolutionary strategy of the transported organisms. -
Getting Beyond the Toy Domain. Meditations on David Deamer's
Getting beyond the toy domain: meditations on David Deamer’s “Assembling Life” The MIT Faculty has made this article openly available. Please share how this access benefits you. Your story matters. Citation Bains, William, "Getting beyond the toy domain: meditations on David Deamer’s 'Assembling Life.'" Life 10, 12 (Feb. 2020): no. 18 doi 10.3390/life10020018 ©2020 Author(s) As Published 10.3390/life10020018 Publisher MDPI Version Final published version Citable link https://hdl.handle.net/1721.1/125661 Terms of Use Creative Commons Attribution 4.0 International license Detailed Terms https://creativecommons.org/licenses/by/4.0/ life Book Review Getting Beyond the Toy Domain. Meditations on David Deamer’s “Assembling Life” William Bains 1,2 1 Five Alarm Bio Ltd., O2h Scitech Park, Mill Lane, Hauxton, Cambridge CB22 5HX, UK; [email protected] 2 Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA Received: 25 October 2019; Accepted: 15 February 2020; Published: 18 February 2020 Abstract: David Deamer has written another book, Assembling Life, on the origin of life. It is unapologetically polemic, presenting Deamer’s view that life originated in fresh water hydrothermal fields on volcanic islands on early Earth, arguing that this provided a unique environment not just for organic chemistry but for the self-assembling structure that drive that chemistry and form the basis of structure in life. It is worth reading, it is an advance in the field, but is it convincing? I argue that the Origin of Life field as a whole is unconvincing, generating results in Toy Domains that cannot be scaled to any real world scenario. -
NASA Astrobiology Institute 2018 Annual Science Report
A National Aeronautics and Space Administration 2018 Annual Science Report Table of Contents 2018 at the NAI 1 NAI 2018 Teams 2 2018 Team Reports The Evolution of Prebiotic Chemical Complexity and the Organic Inventory 6 of Protoplanetary Disk and Primordial Planets Lead Institution: NASA Ames Research Center Reliving the Past: Experimental Evolution of Major Transitions 18 Lead Institution: Georgia Institute of Technology Origin and Evolution of Organics and Water in Planetary Systems 34 Lead Institution: NASA Goddard Space Flight Center Icy Worlds: Astrobiology at the Water-Rock Interface and Beyond 46 Lead Institution: NASA Jet Propulsion Laboratory Habitability of Hydrocarbon Worlds: Titan and Beyond 60 Lead Institution: NASA Jet Propulsion Laboratory The Origins of Molecules in Diverse Space and Planetary Environments 72 and Their Intramolecular Isotope Signatures Lead Institution: Pennsylvania State University ENIGMA: Evolution of Nanomachines in Geospheres and Microbial Ancestors 80 Lead Institution: Rutgers University Changing Planetary Environments and the Fingerprints of Life 88 Lead Institution: SETI Institute Alternative Earths 100 Lead Institution: University of California, Riverside Rock Powered Life 120 Lead Institution: University of Colorado Boulder NASA Astrobiology Institute iii Annual Report 2018 2018 at the NAI In 2018, the NASA Astrobiology Program announced a plan to transition to a new structure of Research Coordination Networks, RCNs, and simultaneously planned the termination of the NASA Astrobiology Institute -
Pincelli M. Hull [email protected] (203) 823-7985
Yale University Department of Geology & Geophysics PO Box 208109 New Haven, CT 06520-8109 Pincelli M. Hull [email protected] (203) 823-7985 http://earth.geology.yale.edu/~ph269/ PROFESSIONAL APPOINTMENTS Assistant Professor, Yale University, Department of Geology & Geophysics July 2013 EDUCATION Yale University, Department of Geology & Geophysics April 2010 – June 2013 ! Post Doctoral Associate [mentor: Derek E. G. Briggs] Universität Konstanz, Department of Biology Oct 2010 – Aug 2011 ! Visiting Postdoctoral Researcher [mentor: Axel Meyer] Scripps Institution of Oceanography, UCSD June 2004 – April 2010 ! PhD, Dissertation Title: Macroevolutionary patterns in planktonic foraminifera and the recovery of pelagic ecosystems from the Cretaceous-Paleogene mass extinction ! Advisors: Richard D. Norris and Mark D. Ohman ! Committee: Peter J.S. Franks, Jeremy B.C. Jackson, Lawrence Saul, George Sugihara ! Curriculum: Biological Oceanography and Center for Marine Biodiversity and Conservation [IGERT Associate, Interdisciplinary Graduate Education Research and Training, NSF] Duke University Sept 1999 – June 2003 ! B.S. Biology, B.S. Earth and Ocean Sciences, German Minor Sea Education Association Spring 1999 ! College semester at sea: oceanography, nautical science, maritime history [C-163] RESEARCH INTERESTS Evolution of Oceans and Life [Paleontology, Paleoceanography, and Global Change] ! Ecological and evolutionary response of marine ecosystems to past global change ! Paleoceanographic and planktonic foraminiferal evolution in the early -
World Premier International Research Center Initiative (WPI) FY 2017 WPI Project Progress Report
World Premier International Research Center Initiative (WPI) FY 2017 WPI Project Progress Report Host Institution Tokyo Institute of Technology Host Institution Head Yoshinao Mishima Research Center Earth-Life Science Institute Center Director Kei Hirose Common instructions: * Unless otherwise specified, prepare this report from the timeline of 31 March 2018. * So as to base this fiscal year’s follow-up review on the “last” center project, please prepare this report from the perspective of the latest project plan. * Use yen (¥) when writing monetary amounts in the report. If an exchange rate is used to calculate the yen amount, give the rate. * Please prepare this report within 10-20 pages (excluding the appendices, and including Summary of State of WPI Center Project Progress (within 2 pages)). Summary of State of WPI Center Project Progress (write within 2 pages) 1. Conducting research of the highest world level In FY2017, ELSI members contributed to the publication of thematic issues in Geoscience Frontiers (titled “Frontiers in early Earth history and primordial life”) and Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences (titled “Re-conceptualizing the origins of life”), which illustrates ELSI is recognized as a leading institute in the study of the early Earth and the emergence of life on the Earth. New and original ideas, scenarios, theories, and technical advances that have been cultivated at ELSI over the past years were presented, such as messy chemistry. The following are representative research topics and highlights that have advanced at ELSI in FY2017. Compositional evolution of the Earth’s core: PI Hirose, PI Hernlund, and PI Helffrich revealed that SiO2 crystallization in the core is an alternative mechanism for core convection to thermal convection (Hirose et al., 2017 Nature; Hirose et al., 2017 Science). -
041-2011-Abstracts-BOE-III-Crete.Pdf
Boreskov Institute of Catalysis of the Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia Institute of Cytology and Genetics of the Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia Borissiak Paleontological Institute of Russian Academy of Sciences, Moscow, Russia III International Conference “Biosphere Origin and Evolution” RETHYMNO, CRETE, GREECE OCTOBER 16-20, 2011 ABSTRACTS Novosibirsk, 2011 © Boreskov Institute of Catalysis, 2011 INTERNATIONAL SCIENTIFIC COMMITTEE Alexei Rozanov, Borissiak Paleontological Institute RAS, Moscow, Russia Co‐Chairman Georgii Zavarzin, Institute of Microbiology RAS, Moscow, Russia Co‐Chairman Vadim Agol Moscow State University, Russia Yury Chernov Severtsov Institute of Ecology and Evolution, Moscow, Russia Institute of Protein Research RAS, Pushchino, Moscow region, Alexander Chetverin Russia David Deamer Biomolecular Engineering, School of Engineering, Santa Cruz, USA V.S. Sobolev Institute of Geology and Mineralogy SB RAS, Nikolay Dobretsov Novosibirsk, Russia Mikhail Fedonkin Geological Institute RAS, Moscow, Russia Siegfried Franck Potsdam Institute for Climate Impact Research, Germany V.I. Vernadskii Institute of Geochemistry and Analytical Chemistry Eric Galimov RAS, Moscow, Russia Mikhail Grachev Limnological Institute SB RAS, Irkutsk, Russia Richard Hoover Nasa Marshall Space Flight Ctr., Huntsville, USA North‐Western Scientific Center RAS, St. Petersburg State Sergey Inge‐Vechtomov University, Russia Trofimuk Institute of Petroleum‐Gas Geology and Geophysics Alexander Kanygin SB RAS, Novosibirsk, Russia Astrospace Centre of Lebedev Physical Institute RAS, Moscow, Nikolay Kardashev Russia Józef Kaźmierczak Institute of Paleobiology PAN, Warsaw, Poland Nikolay Kolchanov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Trofimuk Institute of Petroleum‐Gas Geology and Geophysics Alexei Kontorovich SB RAS, Novosibirsk, Russia National Center for Biotechnology Information, National Library Eugene V. -
Biology Curricula at Universities
Biology curricula at universities European Communities Biologists Association ECBA publication No 1 Biology curricula at universities Report of a Workshop organized by the European Communities Biologists Association Index 1. INTRODUCTION ......................................................................................................................................... 4 2. OBJECTIVES OF THE WORKSHOP......................................................................................................... 5 3. GENERAL CONSIDERATIONS ................................................................................................................. 6 4. THE BASIC TRAINING BIOLOGISTS PRIOR TO SPECIALIZATION .................................................. 8 4.1. INTRODUCTION...................................................................................................................................... 8 4.2. TOPICS TO BE INCLUDED IN THE CENTRAL CORE-PROGRAM................................................................... 8 4.3. SKILLS AND ATTITUDES....................................................................................................................... 10 5. THE PHASE OF SPECIALIZATION (INTO PROFESSION)................................................................... 12 5.1. INTRODUCTION.................................................................................................................................... 12 5.2. FURTHER TRAINING IN RESEARCH ...................................................................................................... -
Formation of Amino Acids and Nucleotide Bases in a Titan Atmosphere Simulation Experiment
ASTROBIOLOGY Volume 12, Number 9, 2012 Research Article ª Mary Ann Liebert, Inc. DOI: 10.1089/ast.2011.0623 Formation of Amino Acids and Nucleotide Bases in a Titan Atmosphere Simulation Experiment S.M. Ho¨rst,1,2 R.V. Yelle,2 A. Buch,3 N. Carrasco,4 G. Cernogora,4 O. Dutuit,5 E. Quirico,5 E. Sciamma-O’Brien,6 M.A. Smith,7,8 A´ . Somogyi,8 C. Szopa,4 R. Thissen,5 and V. Vuitton5 Abstract The discovery of large ( > 100 u) molecules in Titan’s upper atmosphere has heightened astrobiological interest in this unique satellite. In particular, complex organic aerosols produced in atmospheres containing C, N, O, and H, like that of Titan, could be a source of prebiotic molecules. In this work, aerosols produced in a Titan atmosphere simulation experiment with enhanced CO (N2/CH4/CO gas mixtures of 96.2%/2.0%/1.8% and 93.2%/5.0%/ 1.8%) were found to contain 18 molecules with molecular formulae that correspond to biological amino acids and nucleotide bases. Very high-resolution mass spectrometry of isotopically labeled samples confirmed that C4H5N3O, C4H4N2O2,C5H6N2O2,C5H5N5, and C6H9N3O2 are produced by chemistry in the simulation chamber. Gas chromatography–mass spectrometry (GC-MS) analyses of the non-isotopic samples confirmed the presence of cytosine (C4H5N3O), uracil (C5H4N2O2), thymine (C5H6N2O2), guanine (C5H5N5O), glycine (C2H5NO2), and alanine (C3H7NO2). Adenine (C5H5N5) was detected by GC-MS in isotopically labeled samples. The remaining prebiotic molecules were detected in unlabeled samples only and may have been affected by contamination in the chamber.