The Modern Synthesis the Genetic Basis of Natural Selection, the Origin
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The Mendel Newsletter
THE MENDEL NEWSLETTER Archival Resources for the History of Genetics & Allied Sciences ISSUED BY THE LIBRARY OF THE AMERICAN PHILOSOPHICAL SOCIETY New Series, No. 20 June 2015 IN THIS ISSUE John Marius Opitz Papers at the American Philosophical Society — Charles Greifenstein 3 Animal Genetics Collections at Edinburgh University Library Special Collections — Clare Button 6 Rethinking Russian Studies on the Genetics of Natural Populations: Vassily Babkoff’s Papers and the History of the “Evolutionary Brigade,” 1934–1940 — Kirill Rossiianov and Tatiana Avrutskaya 15 Centrum Mendelianum: The Mendel Museum Moved to the Former Premises of Mendel’s Scientific Society — Anna Matalová and Eva Matalová 25 Resident Research Fellowships in Genetics, History of Medicine and Related Disciplines 36 THE AMERICAN PHILOSOPHICAL SOCIETY LIBRARY Philadelphia The Mendel Newsletter June 2015 The Mendel Newsletter American Philosophical Society Library 105 South Fifth Street Philadelphia PA 19106-3386 U.S.A. www.amphilsoc.org/library Editor Managing Editor Michael Dietrich Earle E. Spamer, American Philosophical Society Department of Biological Sciences [email protected] 215 Gilman Hall, HB 6044 Dartmouth College Hanover NH 03755 The Mendel Newsletter [email protected] [email protected] Editorial Board Mark B. Adams, University of Pennsylvania Barbara Kimmelman, Philadelphia University Garland E. Allen, Washington University Martin L. Levitt, American Philosophical Society John Beatty, University of Minnesota Jane Maienschein, Arizona State University Frederick B. Churchill, Indiana University Diane B. Paul, University of Massachusetts, Boston Michael R. Dietrich, Dartmouth College Jan Sapp, York University,Toronto Bernardino Fantini, Institut Louis Jantet d’Histoire Vassiliki Beatty Smocovitis, University of Florida de Medicine, Geneva The Mendel Newsletter, New Series, No. -
Giving Alexander Oparin's Origin of Life Postulates a Future
Giving Alexander Oparin’s Origin of Life Postulates a Future Jeffrey J. Wolynski [email protected] April 17, 2016 Cocoa, FL 32922 Abstract: Alexander Oparin was a Soviet scientist working behind the Iron Curtain. Many of his ideas are true and can be further developed by utilizing the General Theory of Stellar Metamorphosis. Explanation is with author’s writing in dark green. Although Oparin's started out reviewing various panspermia theories, including those of Hermann von Helmholtz and William Thomson Kelvin,[3] he was primarily interested in how life began. As early as 1922, he asserted that: 1. There is no fundamental difference between a living organism and lifeless matter. The complex combination of manifestations and properties characteristic of life must have arisen as a part of the process of the evolution of matter. The complex combination of manifestations and properties characteristic of life arise as a part of the evolution of a single star as it evolves, cools and dies becoming an “exoplanet/planet”, as stellar evolution is planet formation itself. 2. Taking into account the recent discovery of methane in the atmospheres of Jupiter and the other giant planets, Oparin suggested that the infant Earth had possessed a strongly reducing atmosphere, containing methane, ammonia, hydrogen and water vapor. In his opinion, these were the raw materials for the evolution of life. Earth had a very violent hot past before it even possessed a reducing atmosphere, it was big, hot and bright like the Sun before it was cool enough to allow for the formation of ammonia, methane, hydrogen gas and water vapor. -
The Science of Astrobiology
The Science of Astrobiology Cellular Origin, Life in Extreme Habitats and Astrobiology ________________________________________________________________ Volume 20 (Second Edition) ________________________________________________________________ Julian Chela-Flores The Science of Astrobiology A Personal View on Learning to Read the Book of Life Julian Chela-Flores The Abdus Salam International Centre for Theoretical Physics P.O. Box 586 34014 Trieste Italy [email protected] ISSN 1566-0400 ISBN 978-94-007-1626-1 e-ISBN 978-94-007-1627-8 DOI 10.1007/978-94-007-1627-8 Springer Dordrecht Heidelberg London New York Library of Congress Control Number: 2011934255 © Springer Science+Business Media B.V. 2011 No part of this work may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, microfilming, recording or otherwise, without written permission from the Publisher, with the exception of any material supplied specifically for the purpose of being entered and executed on a computer system, for exclusive use by the purchaser of the work. Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) The cupola in the West Atrium of St. Mark's Basilica in Venice, Italy representing the biblical interpretation of Genesis (Cf., also pp. 215-216 at the beginning of Part 4: The destiny of life in the universe. With kind permission of the Procuratoria of St. Mark's Basilica.) For Sarah Catherine Mary Table of contents Table of contents vii Preface xvii Acknowledgements xxi Recommendations to the readers xxiii INTRODUCTION The cultural and scientific context of astrobiology I.1 Early attempts to read the Book of Life 3 ARISTARCHUS OF SAMOS AND HIPPARCHUS 4 NICHOLAS OF CUSA (CUSANUS) 4 NICHOLAS COPERNICUS 4 GIORDANO BRUNO 5 CHARLES DARWIN 6 I.2 Some pioneers of the science of astrobiology 8 ALEXANDER OPARIN 8 STANLEY MILLER 10 SIDNEY W. -
Motoo Kimura (1924-1994)
Motoo Kimura (1924-1994) OR decades the field of mathematical population prize-winners. When our textbook (CROW and KIMURA F genetics and evolutionary theory was dominated 1970) was published, he used his royalties to build a by the three pioneers,J. B. S. HALDANE,R. A. FISHER, tiny greenhouse attached to his home. Every Sunday and SEM'A1.L. WRIGHT.M'ith WRIGI-IT'Sdeath (CROW was orchid day. He used his artistic talent to paint pic- 1988), and for some time before, the leadingsuccessor tures of his favorite flowers, usually on chinaware. to this great heritage was MOTOO KIMURA.Although From age 17 to 19 KIMURA was in high school, where best known for his daring neutral theory of molecular a friendly and scientifically literate teacher encouraged evolution, a concept of great interest andequally great his study of chromosome morphology, and hebecame controversy, he is admired by populationgeneticists a plant cytogeneticist. At that time, cytogenetics was even more forhis deep contributions to the mathemati- very popular in Japan,and he joined thearmy of chro- cal theory. mosome watchers. During this period he was also fasci- MOTOO KIMURA was born November 13,1924 in Oka- nated by a physics course. HIDEKIYUKAWA, later to win zaki, Japan. He diedNovember 13, 1994, on theseventi- the Nobel Prize for predicting the meson, became his eth anniversary of his birth. For some timehe had been scientific hero, and KIMURA began to take an interest a victim of amyotrophic lateral sclerosis and was pro- in mathematics as the language of science. gressively weakening. Nevertheless, his death was acci- Japan was then in themidst of World War 11, and the dental. -
Detecting Selection on Noncoding Nucleotide Variation: Methods and Applications
University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations 2015 Detecting Selection on Noncoding Nucleotide Variation: Methods and Applications Yang Ding University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/edissertations Part of the Bioinformatics Commons, Biology Commons, and the Evolution Commons Recommended Citation Ding, Yang, "Detecting Selection on Noncoding Nucleotide Variation: Methods and Applications" (2015). Publicly Accessible Penn Dissertations. 1687. https://repository.upenn.edu/edissertations/1687 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/edissertations/1687 For more information, please contact [email protected]. Detecting Selection on Noncoding Nucleotide Variation: Methods and Applications Abstract There has been a long tradition in molecular evolution to study selective pressures operating at the amino-acid level. But protein-coding variation is not the only level on which molecular adaptations occur, and it is not clear what roles non-coding variation has played in evolutionary history, since they have not yet been systematically explored. In this dissertation I systematically explore several aspects of selective pressures of noncoding nucleotide variation: The first project (Chapter 2) describes research on the determinants of eukaryotic translation dynamics, which include selection on non-coding aspects of DNA variation. Deep sequencing of ribosome-protected mRNA fragments and polysome gradients in various eukaryotic organisms have revealed an intriguing pattern: shorter mRNAs tend to have a greater overall density of ribosomes than longer mRNAs. There is debate about the cause of this trend. To resolve this open question, I systematically analysed 5’ mRNA structure and codon usage patterns in short versus long genes across 100 sequenced eukaryotic genomes. -
Arxiv:1910.06396V4 [Physics.Pop-Ph] 12 Jun 2021 ∗ Rmtv Ieeitdi H R-Oa Eua(Vni H C System)
Nebula-Relay Hypothesis: Primitive Life in Nebula and Origin of Life on Earth Lei Feng1,2, ∗ 1Key Laboratory of Dark Matter and Space Astronomy, Purple Mountain Observatory, Chinese Academy of Sciences, Nanjing 210023 2Joint Center for Particle, Nuclear Physics and Cosmology, Nanjing University – Purple Mountain Observatory, Nanjing 210093, China Abstract A modified version of panspermia theory, named Nebula-Relay hypothesis or local panspermia, is introduced to explain the origin of life on Earth. Primitive life, acting as the seeds of life on Earth, originated at pre-solar epoch through physicochemical processes and then filled in the pre- solar nebula after the death of pre-solar star. Then the history of life on the Earth can be divided into three epochs: the formation of primitive life in the pre-solar epoch; pre-solar nebula epoch; the formation of solar system and the Earth age of life. The main prediction of our model is that primitive life existed in the pre-solar nebula (even in the current nebulas) and the celestial body formed therein (i.e. solar system). arXiv:1910.06396v4 [physics.pop-ph] 12 Jun 2021 ∗Electronic address: [email protected] 1 I. INTRODUCTION Generally speaking, there are several types of models to interpret the origin of life on Earth. The two most persuasive and popular models are the abiogenesis [1, 2] and pansper- mia theory [3]. The modern version of abiogenesis is also known as chemical origin theory introduced by Oparin in the 1920s [1], and Haldane proposed a similar theory independently [2] at almost the same time. In this theory, the organic compounds are naturally produced from inorganic matters through physicochemical processes and then reassembled into much more complex living creatures. -
The Mystery of Life's Origin
The Mystery of Life’s Origin The Continuing Controversy CHARLES B. THAXTON, WALTER L. BRADLEY, ROGER L. OLSEN, JAMES TOUR, STEPHEN MEYER, JONATHAN WELLS, GUILLERMO GONZALEZ, BRIAN MILLER, DAVID KLINGHOFFER Seattle Discovery Institute Press Description e origin of life from non-life remains one of the most enduring mysteries of modern science. e Mystery of Life’s Origin: e Continuing Controversy investigates how close scientists are to solving that mystery and explores what we are learning about the origin of life from current research in chemistry, physics, astrobiology, biochemistry, and more. e book includes an updated version of the classic text e Mystery of Life’s Origin by Charles axton, Walter Bradley, and Roger Olsen, and new chapters on the current state of the debate by chemist James Tour, physicist Brian Miller, astronomer Guillermo Gonzalez, biologist Jonathan Wells, and philosopher of science Stephen C. Meyer. Copyright Notice Copyright © 2020 by Discovery Institute, All Rights Reserved. Library Cataloging Data e Mystery of Life’s Origin: e Continuing Controversy by Charles B. axton, Walter L. Bradley, Roger L, Olsen, James Tour, Stephen Meyer, Jonathan Wells, Guillermo Gonzalez, Brian Miller, and David Klinghoffer 486 pages, 6 x 9 x 1.0 inches & 1.4 lb, 229 x 152 x 25 mm. & 0.65 kg Library of Congress Control Number: 9781936599745 ISBN-13: 978-1-936599-74-5 (paperback), 978-1-936599-75-2 (Kindle), 978-1-936599-76-9 (EPUB) BISAC: SCI013040 SCIENCE / Chemistry / Organic BISAC: SCI013030 SCIENCE / Chemistry / Inorganic BISAC: SCI007000 SCIENCE / Life Sciences / Biochemistry BISAC: SCI075000 SCIENCE / Philosophy & Social Aspects Publisher Information Discovery Institute Press, 208 Columbia Street, Seattle, WA 98104 Internet: http://www.discoveryinstitutepress.com/ Published in the United States of America on acid-free paper. -
Stephen Jay Gould Papers M1437
http://oac.cdlib.org/findaid/ark:/13030/kt229036tr No online items Guide to the Stephen Jay Gould Papers M1437 Jenny Johnson Department of Special Collections and University Archives August 2011 ; revised 2019 Green Library 557 Escondido Mall Stanford 94305-6064 [email protected] URL: http://library.stanford.edu/spc Guide to the Stephen Jay Gould M1437 1 Papers M1437 Language of Material: English Contributing Institution: Department of Special Collections and University Archives Title: Stephen Jay Gould papers creator: Gould, Stephen Jay source: Shearer, Rhonda Roland Identifier/Call Number: M1437 Physical Description: 575 Linear Feet(958 boxes) Physical Description: 1180 computer file(s)(52 megabytes) Date (inclusive): 1868-2004 Date (bulk): bulk Abstract: This collection documents the life of noted American paleontologist, evolutionary biologist, and historian of science, Stephen Jay Gould. The papers include correspondence, juvenilia, manuscripts, subject files, teaching files, photographs, audiovisual materials, and personal and biographical materials created and compiled by Gould. Both textual and born-digital materials are represented in the collection. Preferred Citation [identification of item], Stephen Jay Gould Papers, M1437. Dept. of Special Collections, Stanford University Libraries, Stanford, Calif. Publication Rights While Special Collections is the owner of the physical and digital items, permission to examine collection materials is not an authorization to publish. These materials are made available for use -
Evolutionary Pluralism and the Ideal of a Unified Biology
História, Ciências, Saúde-Manguinhos ISSN: 0104-5970 ISSN: 1678-4758 Casa de Oswaldo Cruz, Fundação Oswaldo Cruz Araújo, Leonardo Augusto Luvison; Reis, Claudio Ricardo Martins dos Pluralismo evolutivo e o ideal de unificação da biologia História, Ciências, Saúde-Manguinhos, vol. 28, no. 2, 2021, pp. 393-411 Casa de Oswaldo Cruz, Fundação Oswaldo Cruz DOI: https://doi.org/10.1590/S0104-59702021000200004 Available in: https://www.redalyc.org/articulo.oa?id=386167870004 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative Evolutionary pluralism and the ideal of a unified biology Evolutionary pluralism and the ideal of a unified biology ARAÚJO, Leonardo Augusto Luvison; REIS, Claudio Ricardo Martins dos. Evolutionary pluralism and the ideal of a unified biology.História, Ciências, Saúde – Manguinhos, Rio de Janeiro, v.28, n.2, abr.-jun. 2021. Available at: http://dx.doi. org/10.1590/S0104-59702021000200004. Abstract Biological evolution is often regarded as a central and unifying axis of biology. This article discusses historical aspects of this ideal of unification, as well as signs of its disintegration from the 1960s to 1980s. We argue that despite new proposals for the synthesis of biological knowledge, contemporary evolutionary biology is characterized by pluralism. The main points in favor of evolutionary pluralism are discussed and some consequences of this perspective are presented, particularly in terms of the ideal of a unified biology. Finally, we defend an evolutionary pluralism that critiques the ideal of unification as a scientific objective, but still favors local Leonardo Augusto Luvison Araújoi integrations. -
History of Genetics Book Collection Catalogue
History of Genetics Book Collection Catalogue Below is a list of the History of Genetics Book Collection held at the John Innes Centre, Norwich, UK. For all enquires please contact Mike Ambrose [email protected] +44(0)1603 450630 Collection List Symposium der Deutschen Gesellschaft fur Hygiene und Mikrobiologie Stuttgart Gustav Fischer 1978 A69516944 BOOK-HG HG œ.00 15/10/1996 5th international congress on tropical agriculture 28-31 July 1930 Brussels Imprimerie Industrielle et Finangiere 1930 A6645004483 œ.00 30/3/1994 7th International Chromosome Conference Oxford Oxford 1980 A32887511 BOOK-HG HG œ.00 20/2/1991 7th International Chromosome Conference Oxford Oxford 1980 A44688257 BOOK-HG HG œ.00 26/6/1992 17th international agricultural congress 1937 1937 A6646004482 œ.00 30/3/1994 19th century science a selection of original texts 155111165910402 œ14.95 13/2/2001 150 years of the State Nikitsky Botanical Garden bollection of scientific papers. vol.37 Moscow "Kolos" 1964 A41781244 BOOK-HG HG œ.00 15/10/1996 Haldane John Burdon Sanderson 1892-1964 A banned broadcast and other essays London Chatto and Windus 1946 A10697655 BOOK-HG HG œ.00 15/10/1996 Matsuura Hajime A bibliographical monograph on plant genetics (genic analysis) 1900-1929 Sapporo Hokkaido Imperial University 1933 A47059786 BOOK-HG HG œ.00 15/10/1996 Hoppe Alfred John A bibliography of the writings of Samuel Butler (author of "erewhon") and of writings about him with some letters from Samuel Butler to the Rev. F. G. Fleay, now first published London The Bookman's Journal -
Motoo Kimura: Student, Colleague, and Friend
J. Genet., Vol. 75, Number l, April 1996, pp. 5-7. @ Indian Academy of Sciences Motoo Kimura: student, colleague, and friend JAMES F. CROW Genetics Laboratory, University of Wisconsin, Madison, W1 53706, USA Motoo Kimura's scientific life can be divided into two periods, before and after 1968. Prior to this year, he was mainly concerned with developing the mathematical theory of population genetics. In 1968 he published his neutral theory of molecular evolution. After that, although he continued to produce theoretical work, it was at a reduced rate, and his strongest interest was in finding evidence for his neutral theory. The neutral theory attracted wide attention from evolutionists and molecular biologists. Yet population geneticists are, if anything, more impressed by his earlier work. His creative insights made him the natural successor to the great pioneers Haldane, Fisher and Wright. The field had reached a plateau and Kimura gave it new life. The trio became a quartet. Kimura came to the University of Wisconsin as my student in 1954. I was then a young faculty member and had the rare privilege of having early in my career two graduate students of the calibre of Motoo Kimura and Newton Morton. Not many teachers are so fortunate. And to add icing to the cake, Sewall Wright joined the Wisconsin Genetics Department at about the same time. Although they saw each other almost every day, Kimura and Morton pursued different problems. And neither of them worked closely with Wright; their methods were quite dissimilar. Yet it was an exciting time and we often discussed research problems. -
Philosophical and Historical Reflections on the Artificial-Natural Distinction in the Life Sciences ! ! by ! S
! DENATURING NATURE ! Philosophical and Historical Reflections on the Artificial-Natural Distinction in the Life Sciences ! ! by ! S. Andrew Inkpen ! B.Sc. Saint Mary’s University 2008 ! ! ! ! ! A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF ! Doctor of Philosophy ! in ! The Faculty of Graduate and Postdoctoral Studies ! (Philosophy) ! ! ! ! ! THE UNIVERSITY OF BRITISH COLUMBIA (Vancouver) ! August 2014 ! © S. Andrew Inkpen, 2014 ! ! ABSTRACT ! ! The philosopher Georges Canguilhem observed that the “physician’s thought and activity are incomprehensible without the concepts of the normal and the pathological.” I argue similarly regarding the biologist, only it is “the artificial” and “the natural” that are indispensable. Whether it is their objects of study, the methods used to investigate those objects, or even fellow researchers, biologists have habitually classified aspects of their discipline in a way that reflects the artificial-natural distinction. Why this way of classifying? What purpose does it serve? What principles guide its application? With what repercussions? Tracing the transformation of these concepts through a series of historical episodes, I explore the reasons why biologists use this distinction and how it has influenced the practices and directions of certain biological fields—specifically evolutionary biology and ecology. The argument of this dissertation is that in biology decisions concerning the choice and evaluation of experimental and evidential practices, objects of study, and even assessments of scientific personas betray the artificial-natural distinction. Invocations of this distinction, like the normal-pathological, code normative contentions about proper biological practice. “The natural,” I argue, often functions as an epistemic authority. The methodology I employ in this dissertation is conceptual and historical.