The Biology of Phoronida
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Benthic Invertebrate Community Monitoring and Indicator Development for Barnegat Bay-Little Egg Harbor Estuary
July 15, 2013 Final Report Project SR12-002: Benthic Invertebrate Community Monitoring and Indicator Development for Barnegat Bay-Little Egg Harbor Estuary Gary L. Taghon, Rutgers University, Project Manager [email protected] Judith P. Grassle, Rutgers University, Co-Manager [email protected] Charlotte M. Fuller, Rutgers University, Co-Manager [email protected] Rosemarie F. Petrecca, Rutgers University, Co-Manager and Quality Assurance Officer [email protected] Patricia Ramey, Senckenberg Research Institute and Natural History Museum, Frankfurt Germany, Co-Manager [email protected] Thomas Belton, NJDEP Project Manager and NJDEP Research Coordinator [email protected] Marc Ferko, NJDEP Quality Assurance Officer [email protected] Bob Schuster, NJDEP Bureau of Marine Water Monitoring [email protected] Introduction The Barnegat Bay ecosystem is potentially under stress from human impacts, which have increased over the past several decades. Benthic macroinvertebrates are commonly included in studies to monitor the effects of human and natural stresses on marine and estuarine ecosystems. There are several reasons for this. Macroinvertebrates (here defined as animals retained on a 0.5-mm mesh sieve) are abundant in most coastal and estuarine sediments, typically on the order of 103 to 104 per meter squared. Benthic communities are typically composed of many taxa from different phyla, and quantitative measures of community diversity (e.g., Rosenberg et al. 2004) and the relative abundance of animals with different feeding behaviors (e.g., Weisberg et al. 1997, Pelletier et al. 2010), can be used to evaluate ecosystem health. Because most benthic invertebrates are sedentary as adults, they function as integrators, over periods of months to years, of the properties of their environment. -
Development, Organization, and Remodeling of Phoronid Muscles from Embryo to Metamorphosis (Lophotrochozoa: Phoronida) Elena N Temereva1,3* and Eugeni B Tsitrin2
Temereva and Tsitrin BMC Developmental Biology 2013, 13:14 http://www.biomedcentral.com/1471-213X/13/14 RESEARCH ARTICLE Open Access Development, organization, and remodeling of phoronid muscles from embryo to metamorphosis (Lophotrochozoa: Phoronida) Elena N Temereva1,3* and Eugeni B Tsitrin2 Abstract Background: The phoronid larva, which is called the actinotrocha, is one of the most remarkable planktotrophic larval types among marine invertebrates. Actinotrochs live in plankton for relatively long periods and undergo catastrophic metamorphosis, in which some parts of the larval body are consumed by the juvenile. The development and organization of the muscular system has never been described in detail for actinotrochs and for other stages in the phoronid life cycle. Results: In Phoronopsis harmeri, muscular elements of the preoral lobe and the collar originate in the mid-gastrula stage from mesodermal cells, which have immigrated from the anterior wall of the archenteron. Muscles of the trunk originate from posterior mesoderm together with the trunk coelom. The organization of the muscular system in phoronid larvae of different species is very complex and consists of 14 groups of muscles. The telotroch constrictor, which holds the telotroch in the larval body during metamorphosis, is described for the first time. This unusual muscle is formed by apical myofilaments of the epidermal cells. Most larval muscles are formed by cells with cross-striated organization of myofibrils. During metamorphosis, most elements of the larval muscular system degenerate, but some of them remain and are integrated into the juvenile musculature. Conclusion: Early steps of phoronid myogenesis reflect the peculiarities of the actinotroch larva: the muscle of the preoral lobe is the first muscle to appear, and it is important for food capture. -
Oogenesis in the Viviparous Phoronid, Phoronis Embryolabi
J_ID: Customer A_ID: JMOR20765 Cadmus Art: JMOR20765 Ed. Ref. No.: JMOR-17-0193.R1 Date: 20-October-17 Stage: Page: 1 Received: 3 September 2017 | Revised: 6 October 2017 | Accepted: 8 October 2017 DOI: 10.1002/jmor.20765 RESEARCH ARTICLE Oogenesis in the viviparous phoronid, Phoronis embryolabi Elena N. Temereva Biological Faculty, Department of Invertebrate Zoology, Moscow State Abstract University, Russia, Moscow The study of gametogenesis is useful for phylogenetic analysis and can also provide insight into the physiology and biology of species. This report describes oogenesis in the Phoronis embryolabi,a Correspondence newly described species, which has an unusual type of development, that is, a viviparity of larvae. Elena N. Temereva, Biological Faculty, Department of Invertebrate Zoology, Phoronid oogonia are described here for the first time. Yolk formation is autoheterosynthetic. Het- Moscow State University, Russia, Moscow. erosynthesis occurs in the peripheral cytoplasm via fusion of endocytosic vesicles. Simultaneously, Email: [email protected] the yolk is formed autosynthetically by rough endoplasmic reticulum in the central cytoplasm. Each developing oocyte is surrounded by the follicle of vasoperitoneal cells, whose cytoplasm is filled Funding information Russian Foundation for Basic Research, with glycogen particles and various inclusions. Cytoplasmic bridges connect developing oocytes Grant/Award Number: #17-04-00586 and and vasoperitoneal cells. These bridges and the presence of the numerous glycogen particles in the # 15-29-02601; Russian Science vasoperitoneal cells suggest that nutrients are transported from the follicle to oocytes. Phoronis Foundation, Grant/Award Number: #14-50-00029; M.V. Ministry of Education embryolabi is just the second phoronid species in which the ultrastructure of oogenesis has been and Science of the Russian Federation studied, and I discuss the data obtained comparing them with those in Phoronopsis harmeri. -
Most Impaired" Coral Reef Areas in the State of Hawai'i
Final Report: EPA Grant CD97918401-0 P. L. Jokiel, K S. Rodgers and Eric K. Brown Page 1 Assessment, Mapping and Monitoring of Selected "Most Impaired" Coral Reef Areas in the State of Hawai'i. Paul L. Jokiel Ku'ulei Rodgers and Eric K. Brown Hawaii Coral Reef Assessment and Monitoring Program (CRAMP) Hawai‘i Institute of Marine Biology P.O.Box 1346 Kāne'ohe, HI 96744 Phone: 808 236 7440 e-mail: [email protected] Final Report: EPA Grant CD97918401-0 April 1, 2004. Final Report: EPA Grant CD97918401-0 P. L. Jokiel, K S. Rodgers and Eric K. Brown Page 2 Table of Contents 0.0 Overview of project in relation to main Hawaiian Islands ................................................3 0.1 Introduction...................................................................................................................3 0.2 Overview of coral reefs – Main Hawaiian Islands........................................................4 1.0 Ka¯ne‘ohe Bay .................................................................................................................12 1.1 South Ka¯ne‘ohe Bay Segment ...................................................................................62 1.2 Central Ka¯ne‘ohe Bay Segment..................................................................................86 1.3 North Ka¯ne‘ohe Bay Segment ....................................................................................94 2.0 South Moloka‘i ................................................................................................................96 2.1 Kamalō -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Chemical Defense of a Soft-Sediment Dwelling Phoronid Against Local Epibenthic Predators
Vol. 374: 101–111, 2009 MARINE ECOLOGY PROGRESS SERIES Published January 13 doi: 10.3354/meps07767 Mar Ecol Prog Ser Chemical defense of a soft-sediment dwelling phoronid against local epibenthic predators Amy A. Larson1, 3,*, John J. Stachowicz2 1Bodega Marine Laboratory, PO Box 247, Bodega Bay, California 94923-0247, USA 2Section of Evolution and Ecology, University of California, Davis, California 95616, USA 3Present address: Aquatic Bioinvasions Research and Policy Institute, Environmental Sciences and Resources, Portland State University, PO Box 751 (ESR), Portland, Oregon 97207, USA ABSTRACT: Chemical defenses are thought to be infrequent in most soft-sediment systems because organisms that live beneath the sediment rely more on avoidance or escape to reduce predation. However, selection for chemical deterrence might be strong among soft-sediment organisms that are sessile and expose at least part of their body above the surface. The phoronid Phoronopsis viridis is a tube-dwelling lophophorate that reaches high densities (26 500 m–2) on tidal flats in small bays in California, USA. We found that P. viridis is broadly unpalatable, and that this unpalatability is most apparent in the anterior section, including the lophophore, which is exposed to epibenthic predators as phoronids feed. Experimental removal of lophophores in the field increased the palatability of phoronids to predators; deterrence was regained after 12 d, when the lophophores had regenerated. Extracts of P. viridis deterred both fish and crab predators. Bioassay-guided fractionation suggested that the active compounds are relatively non-polar and volatile. Although we were unable to isolate the deterrent metabolite(s), we were able to rule out brominated phenols, a group of compounds commonly reported from infaunal organisms. -
Tropical Marine Invertebrates CAS BI 569 Phylum Echinodermata by J
Tropical Marine Invertebrates CAS BI 569 Phylum Echinodermata by J. R. Finnerty Porifera Ctenophora Cnidaria Deuterostomia Ecdysozoa Lophotrochozoa Chordata Arthropoda Annelida Hemichordata Onychophora Mollusca Echinodermata *Nematoda *Platyhelminthes Acoelomorpha Calcispongia Silicispongiae PROTOSTOMIA Phylum Phylum Phylum CHORDATA ECHINODERMATA HEMICHORDATA Blastopore -> anus Radial / equal cleavage Coelom forms by enterocoely ! Protostome = blastopore contributes to the mouth blastopore mouth anus ! Deuterostome = blastopore becomes anus blastopore anus mouth Halocynthia, a tunicate (Urochordata) Coelom Formation Protostomes: Schizocoely Deuterostomes: Enterocoely Enterocoely in a sea star Axocoel (protocoel) Gives rise to small portion of water vascular system. Hydrocoel (mesocoel) Gives rise to water vascular system. Somatocoel (metacoel) Gives rise to lining of adult body cavity. Echinoderm Metamorphosis ECHINODERM FEATURES Water vascular system and tube feet Pentaradial symmetry Coelom formation by enterocoely Water Vascular System Tube Foot Tube Foot Locomotion ECHINODERM DIVERSITY Crinoidea Asteroidea Ophiuroidea Holothuroidea Echinoidea “sea lilies” “sea stars” “brittle stars” “sea cucumbers” “urchins, sand dollars” Group Form & Habit Habitat Ossicles Feeding Special Characteristics Crinoids 5-200 arms, stalked epifaunal Internal skeleton suspension mouth upward; mucous & Of each arm feeders secreting glands on sessile podia Ophiuroids usually 5 thin arms, epifaunal ossicles in arms deposit feeders act and appear like vertebrae -
Glossary - Zoology - Intro
1 Glossary - Zoology - Intro Abdomen: Posterior part of an arthropoda’ body; in vertebrates: abdomen between thorax and pelvic girdle. Acoelous: See coelom. Amixia: A restriction that prevents general intercrossing in a species leading to inbreeding. Anabiosis: Resuscitation after apparent death. Archenteron: See coelom. Aulotomy: Capacity of separating a limb; followed by regeneration; used also for asexual reproduction; see also fissipary (in echinodermata and platyhelminthes). Basal Lamina: Basal plate of developing neural tube; the noncellular, collagenous layer that separates an epithelium from an underlying layer of tissue; also basal membrane. Benthic: Organisms that live on ocean bottoms. Blastocoel: See coelom. Blastula: Stage of embryonic development, at / near the end of cleavage, preceding gastrulation; generally consisting of a hollow ball of cells (coeloblastula); if no blastoceol is present it is termed stereoblastulae (arise from isolecithal and moderately telolecithal ova); in meroblastic cleavage (only the upper part of the zygote is divided), the blastula consists of a disc of cells lying on top of the yolk mass; the blastocoel is reduced to the space separating the cells from the yolk mass. Blastoporus: The opening into the archenteron (the primitive gastric cavity of the gastrula = gastrocoel) developed by the invagination of the blastula = protostoma. Cephalisation: (Gk. kephale, little head) A type of animal body plan or organization in which one end contains a nerve-rich region and functions as a head. Cilium: (pl. cilia, long eyelash) A short, centriole-based, hairlike organelle: Rows of cilia propel certain protista. Cilia also aid the movement of substances across epithelial surfaces of animal cells. Cleavage: The zygote undergoes a series of rapid, synchronous mitotic divisions; results in a ball of many cells. -
Tropical Marine Invertebrates CAS BI 569 Major Animal Characters Part 2 — Adult Bodyplan Features by J
Tropical Marine Invertebrates CAS BI 569 Major Animal Characters Part 2 — Adult Bodyplan Features by J. R. Finnerty Metazoan Characters Part II. Adult Body Plan Features CHARACTER states EPITHELIUM: present; absent; BODY LAYERS: diploblastic; triploblastic BODY CAVITIES: precoelomate; acoelomate; pseudocoelomate; eucoelomate; GUT: absent; blind sac; through-gut; SYMMETRY: asymmetrical; radial; bi-radial; bilateral; pentaradial SKELETON: “spicules;” “bones;” hydrostat; exoskeleton EPITHELIUM Sheet of cells that lines body cavities or covers outer body surfaces. E.g., skin, gut lining Creates extracellular compartments four key characteristics: 1.continuous — uninterrupted layer 2. intercellular junctions cell 3. polarity (apical vs. basal) 4. basal lamina (extracellular matrix on which basal cell surface rests; collagen secreted by cells) Ruppert et al., Figure 6.1 3 Body Layers (Germ Layers) Germ layers form during gastrulation ectoderm blastocoel blastocoel endoderm gut blastoderm BLASTULA blastopore 4 Diploblastic Condition Two germ layers, endoderm & ectoderm blastocoel blastocoel endoderm gut gut ectoderm ectoderm 5 Triploblastic Condition Three germ layers, endoderm, ectoderm, & mesoderm. blastocoel gut ectoderm Body Cavities I. Blastocoel the central cavity in the hollow blastula the 1st body cavity II. Archenteron “primitive gut” opens to the outside via the blastopore lined by endoderm III. Coelom cavity entirely lined by mesoderm A pseudocoelom is only partially lined by mesoderm. It may represent a persistent blastocoel. Character -
Role of Seabed Mapping Techniques in Environmental Monitoring and Management
Science Series Technical Report no.127 The role of seabed mapping techniques in environmental monitoring and management S.E. Boyd, R.A. Coggan, S.N.R. Birchenough, D.S. Limpenny, P.E. Eastwood, R.L. Foster-Smith, S. Philpott, W.J. Meadows, J.W.C. James, K. Vanstaen, S. Soussi and S. Rogers Science Series Technical Report no.127 The role of seabed mapping techniques in environmental monitoring and management S.E. Boyd, R.A. Coggan, S.N.R. Birchenough, D.S. Limpenny, P.E. Eastwood, R.L. Foster-Smith, S. Philpott, W.J. Meadows, J.W.C. James, K. Vanstaen, S. Soussi and S. Rogers April 2006 Funded by This report should be cited as: S.E. Boyd, R.A. Coggan, S.N.R. Birchenough, D.S. Limpenny, P.E. Eastwood, R.L. Foster-Smith, S. Philpott, W.J. Meadows, J.W.C. James, K. Vanstaen, S. Soussi and S. Rogers, 2006. The role of seabed mapping techniques in environmental monitoring and management. Sci. Ser. Tech Rep., Cefas Lowestoft, 127: 170pp. Authors responsible for writing sections of this report are as follows: Chapter 1 - S.E. Boyd, R.A. Coggan, S.N.R. Birchenough and P.E. Eastwood Chapter 2 - S.E. Boyd Chapter 3 - D.S. Limpenny, S.E. Boyd, S.N.R. Birchenough, W.J. Meadows and K. Vanstaen Chapter 4 - Part 1: R.A. Coggan and S. Philpott: Part 2: P.Eastwood. Chapter 5 - S.N.R.Birchenough, R.Foster-Smith, S.E. Boyd, W.J. Meadows, K. Vanstaen and D.S. Limpenny Chapter 6 - R.A. -
Phoronis Muelleri (Phoronida) Based on Immunocytochemical Staining and Confocal Laser Scanning Microscopy“
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by OTHES DIPLOMARBEIT Titel der Diplomarbeit „Analysis of the Nervous System of the Actinotroch Larva of Phoronis muelleri (Phoronida) based on Immunocytochemical Staining and Confocal Laser Scanning Microscopy“ Verfasserin Birgit Sonnleitner angestrebter akademischer Grad Magistra der Naturwissenschaften (Mag.rer.nat.) Wien, 2012 Studienkennzahl lt. Studienblatt: A 439 Studienrichtung lt. Studienblatt: Zoologie Betreuerin / Betreuer: Univ.-Prof. DDr. Andreas Wanninger Für meine Eltern, die mich immer unterstützen Content Abstract ................................................................................................................................................... 3 Zusammenfassung ................................................................................................................................... 3 Introduction ............................................................................................................................................. 5 Materials and Methods ............................................................................................................................ 8 Animal collection and fixation ........................................................................................................ 8 Immunocytochemistry, data acquisition and analysis ..................................................................... 9 Results .................................................................................................................................................. -
"Phoronida". In: Encyclopedia of Life Science
Phoronida Introductory article Christian C Emig, Centre d’Oce´anologie de Marseille CNRS, Marseille, France Article Contents . Basic Design The Phoronida, divided into two genera and 10 species, is a small marine group, which . Diversity and Lifestyles belongs to the phylum Lophophorata. Fossil History and Phylogeny Basic Design complexity of the lophophore from an oval to a helicoidal, The Phoronida is an exclusively marine group with a sessile through a horseshoe and spiral shape. This is related to an vermiform body enclosed in a tube (Figure 1) The body is increase in the number of tentacles, which is proportional composed of three distinct parts (prosome, mesosome and to the general body size. metasome), each containing its own coelomic cavity. The The metasome (or trunk) is slender and cylindrical, with prosome forms the epistome, a fold overhanging the mouth a bulb-like posterior end (or ampulla) that anchors the dorsally. The mesosome bears the lophophore, with the body in the rear end of the tube. It is separated from the rest mouth lying between its two rows of tentacles. The of the body by the diaphragm, a thick transverse septum lophophore is a terminal, bilaterally symmetrical, tentacle located behind the lophophore. crown, each tentacle having complex arrays of cilia for The digestive tract is U-shaped, bringing the anus close filter-feeding. Lophophore shape is a fairly constant to the mouth. The descending branch is divided into a short feature within each species, and there is an increasing oesophagus, followed by a long prestomach, then a stomach surrounded by a blood plexus.