Mediterranean Marine Science
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High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project
High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project AEA Technology, Environment Contract: W/35/00632/00/00 For: The Department of Trade and Industry New & Renewable Energy Programme Report issued 30 August 2002 (Version with minor corrections 16 September 2002) Keith Hiscock, Harvey Tyler-Walters and Hugh Jones Reference: Hiscock, K., Tyler-Walters, H. & Jones, H. 2002. High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Report from the Marine Biological Association to The Department of Trade and Industry New & Renewable Energy Programme. (AEA Technology, Environment Contract: W/35/00632/00/00.) Correspondence: Dr. K. Hiscock, The Laboratory, Citadel Hill, Plymouth, PL1 2PB. [email protected] High level environmental screening study for offshore wind farm developments – marine habitats and species ii High level environmental screening study for offshore wind farm developments – marine habitats and species Title: High Level Environmental Screening Study for Offshore Wind Farm Developments – Marine Habitats and Species Project. Contract Report: W/35/00632/00/00. Client: Department of Trade and Industry (New & Renewable Energy Programme) Contract management: AEA Technology, Environment. Date of contract issue: 22/07/2002 Level of report issue: Final Confidentiality: Distribution at discretion of DTI before Consultation report published then no restriction. Distribution: Two copies and electronic file to DTI (Mr S. Payne, Offshore Renewables Planning). One copy to MBA library. Prepared by: Dr. K. Hiscock, Dr. H. Tyler-Walters & Hugh Jones Authorization: Project Director: Dr. Keith Hiscock Date: Signature: MBA Director: Prof. S. Hawkins Date: Signature: This report can be referred to as follows: Hiscock, K., Tyler-Walters, H. -
The Peculiar Protein Ultrastructure of Fan Shell and Pearl Oyster Byssus
Soft Matter View Article Online PAPER View Journal | View Issue A new twist on sea silk: the peculiar protein ultrastructure of fan shell and pearl oyster byssus† Cite this: Soft Matter, 2018, 14,5654 a a b b Delphine Pasche, * Nils Horbelt, Fre´de´ric Marin, Se´bastien Motreuil, a c d Elena Macı´as-Sa´nchez, Giuseppe Falini, Dong Soo Hwang, Peter Fratzl *a and Matthew James Harrington *ae Numerous mussel species produce byssal threads – tough proteinaceous fibers, which anchor mussels in aquatic habitats. Byssal threads from Mytilus species, which are comprised of modified collagen proteins – have become a veritable archetype for bio-inspired polymers due to their self-healing properties. However, threads from different species are comparatively much less understood. In particular, the byssus of Pinna nobilis comprises thousands of fine fibers utilized by humans for millennia to fashion lightweight golden fabrics known as sea silk. P. nobilis is very different from Mytilus from an ecological, morphological and evolutionary point of view and it stands to reason that the structure– Creative Commons Attribution 3.0 Unported Licence. function relationships of its byssus are distinct. Here, we performed compositional analysis, X-ray diffraction (XRD) and transmission electron microscopy (TEM) to investigate byssal threads of P. nobilis, as well as a closely related bivalve species (Atrina pectinata) and a distantly related one (Pinctada fucata). Received 20th April 2018, This comparative investigation revealed that all three threads share a similar molecular superstructure Accepted 18th June 2018 comprised of globular proteins organized helically into nanofibrils, which is completely distinct from DOI: 10.1039/c8sm00821c the Mytilus thread ultrastructure, and more akin to the supramolecular organization of bacterial pili and F-actin. -
Spatial Distribution and Abundance of the Endangered Fan Mussel Pinna Nobilis Was Investigated in Souda Bay, Crete, Greece
Vol. 8: 45–54, 2009 AQUATIC BIOLOGY Published online December 29 doi: 10.3354/ab00204 Aquat Biol OPENPEN ACCESSCCESS Spatial distribution, abundance and habitat use of the protected fan mussel Pinna nobilis in Souda Bay, Crete Stelios Katsanevakis1, 2,*, Maria Thessalou-Legaki2 1Institute of Marine Biological Resources, Hellenic Centre for Marine Research (HCMR), 46.7 km Athens-Sounio, 19013 Anavyssos, Greece 2Department of Zoology–Marine Biology, Faculty of Biology, University of Athens, Panepistimioupolis, 15784 Athens, Greece ABSTRACT: The spatial distribution and abundance of the endangered fan mussel Pinna nobilis was investigated in Souda Bay, Crete, Greece. A density surface modelling approach using survey data from line transects, integrated with a geographic information system, was applied to estimate the population density and abundance of the fan mussel in the study area. Marked zonation of P. nobilis distribution was revealed with a density peak at a depth of ~15 m and practically zero densities in shallow areas (<4 m depth) and at depths >30 m. A hotspot of high density was observed in the south- eastern part of the bay. The highest densities occurred in Caulerpa racemosa and Cymodocea nodosa beds, and the lowest occurred on rocky or unvegetated sandy/muddy bottoms and in Caulerpa pro- lifera beds. The high densities of juvenile fan mussels (almost exclusively of the first age class) observed in dense beds of the invasive alien alga C. racemosa were an indication of either preferen- tial recruitment or reduced juvenile mortality in this habitat type. In C. nodosa beds, mostly large individuals were observed. The total abundance of the species was estimated as 130 900 individuals with a 95% confidence interval of 100 600 to 170 400 individuals. -
A New Insight on the Symbiotic Association Between the Fan Mussel Pinna Rudis and the Shrimp Pontonia Pinnophylax in the Azores (NE Atlantic)
Global Journal of Zoology Joao P Barreiros1, Ricardo JS Pacheco2 Short Communication and Sílvia C Gonçalves2,3 1CE3C /ABG, Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity A New Insight on the Symbiotic Group. University of the Azores, 9700-042 Angra do Heroísmo, Portugal Association between the Fan 2MARE, Marine and Environmental Sciences Centre, ESTM, Polytechnic Institute of Leiria, 2520-641 Peniche, Portugal Mussel Pinna Rudis and the Shrimp 3MARE, Marine and Environmental Sciences Centre, Department of Life Sciences, Faculty of Sciences Pontonia Pinnophylax in the Azores and Technology, University of Coimbra, 3004-517 Coimbra, Portugal (NE Atlantic) Dates: Received: 05 July, 2016; Accepted: 13 July, 2016; Published: 14 July, 2016 collect fan mussels which implied that the presence of the shrimps was *Corresponding author: João P. Barreiros, evaluated through underwater observation of the shell (when slightly CE3C /ABG, Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity opened) or through counter light (by means of pointing a lamp). A Group. University of the Azores, 9700-042 Angra do previous note on this work was reported by the authors [4]. Presently, Heroísmo, Portugal, E-mail; [email protected] the authors are indeed collecting specimens of P. rudis in the same www.peertechz.com areas referred here for a more comprehensive project on symbiotic mutualistic/ relationships in several subtidal Azorean animals (work Communication in progress). Bivalves Pinnidae are typical hosts of Pontoniinae shrimps. Pinna rudis is widely distributed along Atlantic and Several species of this family were documented to harbor these Mediterranean waters but previous records of the association decapods inside their shells, especially shrimps from the genus between this bivalve and P. -
Louisiana's Animal Species of Greatest Conservation Need (SGCN)
Louisiana's Animal Species of Greatest Conservation Need (SGCN) ‐ Rare, Threatened, and Endangered Animals ‐ 2020 MOLLUSKS Common Name Scientific Name G‐Rank S‐Rank Federal Status State Status Mucket Actinonaias ligamentina G5 S1 Rayed Creekshell Anodontoides radiatus G3 S2 Western Fanshell Cyprogenia aberti G2G3Q SH Butterfly Ellipsaria lineolata G4G5 S1 Elephant‐ear Elliptio crassidens G5 S3 Spike Elliptio dilatata G5 S2S3 Texas Pigtoe Fusconaia askewi G2G3 S3 Ebonyshell Fusconaia ebena G4G5 S3 Round Pearlshell Glebula rotundata G4G5 S4 Pink Mucket Lampsilis abrupta G2 S1 Endangered Endangered Plain Pocketbook Lampsilis cardium G5 S1 Southern Pocketbook Lampsilis ornata G5 S3 Sandbank Pocketbook Lampsilis satura G2 S2 Fatmucket Lampsilis siliquoidea G5 S2 White Heelsplitter Lasmigona complanata G5 S1 Black Sandshell Ligumia recta G4G5 S1 Louisiana Pearlshell Margaritifera hembeli G1 S1 Threatened Threatened Southern Hickorynut Obovaria jacksoniana G2 S1S2 Hickorynut Obovaria olivaria G4 S1 Alabama Hickorynut Obovaria unicolor G3 S1 Mississippi Pigtoe Pleurobema beadleianum G3 S2 Louisiana Pigtoe Pleurobema riddellii G1G2 S1S2 Pyramid Pigtoe Pleurobema rubrum G2G3 S2 Texas Heelsplitter Potamilus amphichaenus G1G2 SH Fat Pocketbook Potamilus capax G2 S1 Endangered Endangered Inflated Heelsplitter Potamilus inflatus G1G2Q S1 Threatened Threatened Ouachita Kidneyshell Ptychobranchus occidentalis G3G4 S1 Rabbitsfoot Quadrula cylindrica G3G4 S1 Threatened Threatened Monkeyface Quadrula metanevra G4 S1 Southern Creekmussel Strophitus subvexus -
Computational Modelling of Wet Adhesive Mussel Foot Proteins (Bivalvia): Insights Into the Evolutionary Convolution in Diverse Perspectives P
www.nature.com/scientificreports OPEN Computational modelling of wet adhesive mussel foot proteins (Bivalvia): Insights into the evolutionary convolution in diverse perspectives P. P. Anand & Y. Shibu Vardhanan Underwater adhesion in mussels (Bivalvia) is an extreme adaptation to achieve robust and frm wet adhesion in the freshwater/brackish/ocean, which biochemically shaped through millions of years. The protein-based adhesion has huge prospective in various felds like industry, medical, etc. Currently, no comprehensive records related to the systematic documentation of structural and functional properties of Mussel foot proteins (Mfps). In this study, we identifed the nine species of bivalves in which the complete sequence of at least one adhesive protein is known. The insilico characterization revealed the specifc physio-chemical structural and functional characters of each Mfps. The evolutionary analyses of selected bivalves are mainly based on Mfps, Mitogenome, and TimeTree. The outcome of the works has great applications for designing biomimetic materials in future. Some groups of mussels are capable to produce proteinaceous glue- like sticky material known as byssus thread made by an array of foot proteins (fps). Tis byssus contains mainly four parts i.e. Plaque, thread, stem, and root. Individual threads proximally merged together to form stem and base of the stem (root) deeply anchored at the base of animal foot. Each byssus threads terminating distally with a fattened plaque which mediates adhesion to the substratum1–4. Each part of the byssus thread complex formed by the auto-assembly of secretory products originating from four distinct glands enclosed in the mussel foot4,5. Tese mussel foot protein (Mfps), mastered the ability to binding the diverse substratum by using adhesive plaques. -
Nacre Tablet Thickness Records Formation Temperature in Modern and Fossil Shells
Lawrence Berkeley National Laboratory Recent Work Title Nacre tablet thickness records formation temperature in modern and fossil shells Permalink https://escholarship.org/uc/item/1rf2g647 Authors Gilbert, PUPA Bergmann, KD Myers, CE et al. Publication Date 2017-02-15 DOI 10.1016/j.epsl.2016.11.012 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Bivalve nacre preserves a physical indicator of paleotemperature Pupa U.P.A Gilbert1,2*, Kristin D. Bergmann3,4, Corinne E. Myers5,6, Ross T. DeVol1, Chang-Yu Sun1, A.Z. Blonsky1, Jessica Zhao2, Elizabeth A. Karan2, Erik Tamre2, Nobumichi Tamura7, Matthew A. Marcus7, Anthony J. Giuffre1, Sarah Lemer5, Gonzalo Giribet5, John M. Eiler8, Andrew H. Knoll3,5 1 University of Wisconsin–Madison, Department of Physics, Madison WI 53706 USA. 2 Harvard University, Radcliffe Institute for Advanced Study, Fellowship Program, Cambridge, MA 02138. 3 Harvard University, Department of Earth and Planetary Sciences, Cambridge, MA 02138. 4 Massachusetts Institute of Technology, Department of Earth, Atmospheric and Planetary Sciences, Cambridge, MA 02138. 5 Harvard University, Department of Organismic and Evolutionary Biology, Cambridge, MA 02138. 6 University of New Mexico, Department of Earth and Planetary Sciences, Albuquerque, NM 87131. 7 Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. 8 California Institute of Technology, Division of Geological and Planetary Sciences, Pasadena, CA 91125 * [email protected], previously publishing as Gelsomina De Stasio Abstract: Biomineralizing organisms record chemical information as they build structure, but to date chemical and structural data have been linked in only the most rudimentary of ways. In paleoclimate studies, physical structure is commonly evaluated for evidence of alteration, constraining geochemical interpretation. -
TREATISE ONLINE Number 48
TREATISE ONLINE Number 48 Part N, Revised, Volume 1, Chapter 31: Illustrated Glossary of the Bivalvia Joseph G. Carter, Peter J. Harries, Nikolaus Malchus, André F. Sartori, Laurie C. Anderson, Rüdiger Bieler, Arthur E. Bogan, Eugene V. Coan, John C. W. Cope, Simon M. Cragg, José R. García-March, Jørgen Hylleberg, Patricia Kelley, Karl Kleemann, Jiří Kříž, Christopher McRoberts, Paula M. Mikkelsen, John Pojeta, Jr., Peter W. Skelton, Ilya Tëmkin, Thomas Yancey, and Alexandra Zieritz 2012 Lawrence, Kansas, USA ISSN 2153-4012 (online) paleo.ku.edu/treatiseonline PART N, REVISED, VOLUME 1, CHAPTER 31: ILLUSTRATED GLOSSARY OF THE BIVALVIA JOSEPH G. CARTER,1 PETER J. HARRIES,2 NIKOLAUS MALCHUS,3 ANDRÉ F. SARTORI,4 LAURIE C. ANDERSON,5 RÜDIGER BIELER,6 ARTHUR E. BOGAN,7 EUGENE V. COAN,8 JOHN C. W. COPE,9 SIMON M. CRAgg,10 JOSÉ R. GARCÍA-MARCH,11 JØRGEN HYLLEBERG,12 PATRICIA KELLEY,13 KARL KLEEMAnn,14 JIřÍ KřÍž,15 CHRISTOPHER MCROBERTS,16 PAULA M. MIKKELSEN,17 JOHN POJETA, JR.,18 PETER W. SKELTON,19 ILYA TËMKIN,20 THOMAS YAncEY,21 and ALEXANDRA ZIERITZ22 [1University of North Carolina, Chapel Hill, USA, [email protected]; 2University of South Florida, Tampa, USA, [email protected], [email protected]; 3Institut Català de Paleontologia (ICP), Catalunya, Spain, [email protected], [email protected]; 4Field Museum of Natural History, Chicago, USA, [email protected]; 5South Dakota School of Mines and Technology, Rapid City, [email protected]; 6Field Museum of Natural History, Chicago, USA, [email protected]; 7North -
Guide to Theecological Systemsof Puerto Rico
United States Department of Agriculture Guide to the Forest Service Ecological Systems International Institute of Tropical Forestry of Puerto Rico General Technical Report IITF-GTR-35 June 2009 Gary L. Miller and Ariel E. Lugo The Forest Service of the U.S. Department of Agriculture is dedicated to the principle of multiple use management of the Nation’s forest resources for sustained yields of wood, water, forage, wildlife, and recreation. Through forestry research, cooperation with the States and private forest owners, and management of the National Forests and national grasslands, it strives—as directed by Congress—to provide increasingly greater service to a growing Nation. The U.S. Department of Agriculture (USDA) prohibits discrimination in all its programs and activities on the basis of race, color, national origin, age, disability, and where applicable sex, marital status, familial status, parental status, religion, sexual orientation genetic information, political beliefs, reprisal, or because all or part of an individual’s income is derived from any public assistance program. (Not all prohibited bases apply to all programs.) Persons with disabilities who require alternative means for communication of program information (Braille, large print, audiotape, etc.) should contact USDA’s TARGET Center at (202) 720-2600 (voice and TDD).To file a complaint of discrimination, write USDA, Director, Office of Civil Rights, 1400 Independence Avenue, S.W. Washington, DC 20250-9410 or call (800) 795-3272 (voice) or (202) 720-6382 (TDD). USDA is an equal opportunity provider and employer. Authors Gary L. Miller is a professor, University of North Carolina, Environmental Studies, One University Heights, Asheville, NC 28804-3299. -
The Intermingling of Benthic Macroinvertebrate Communities During a Period of Shifting Range: the “East of Nantucket” Atlant
Received: 2 November 2018 | Revised: 1 April 2019 | Accepted: 13 May 2019 DOI: 10.1111/maec.12546 ORIGINAL ARTICLE The intermingling of benthic macroinvertebrate communities during a period of shifting range: The “East of Nantucket” Atlantic Surfclam Survey and the existence of transient multiple stable states Eric N. Powell1 | Roger Mann2 | Kelsey M. Kuykendall1 | M. Chase Long2 | Jeremy R. Timbs1 1Gulf Coast Research Laboratory, University of Southern Mississippi, Ocean Springs, Abstract Mississippi A f survey o the region eastward of Nantucket provided an opportunity to examine 2 Virginia Institute of Marine Science, The the cold temperate–boreal boundary along the high-energy Great South Channel. College of William and Mary, Gloucester Point, Virginia Here described are the benthic macroinvertebrate community types encountered, with a focus on the influence of climate change on the range boundaries of the Correspondence Eric N. Powell, Gulf Coast Research benthic biomass dominants and the potential existence of transient multiple stable Laboratory, University of Southern states. The survey identified three primary community types. The shallowest sites Mississippi, 703 East Beach Drive, Ocean Springs, Mississippi 39564 were occupied by a surfclam-dominated community, comprising an abundance of Email: [email protected] large (≥150 mm) surfclams, and a few common attached epibiota primarily attached Funding information to exposed surfclam shell. Two communities exist at intermediate depths, one domi- National Science Foundation’s Industry/ nated by submarket and small market‐size surfclams (<150 mm) and the other, created University Cooperative Research Center SCeMFiS (Science Center for Marine by mussel mats and their attendant epibiota, crabs, sea urchins, and other mobile epi- Fisheries), Grant/Award Number: NSF fauna. -
Short Guidance for the Construction, Instalation and Removal of Pinna Nobilis Larval Collectors
SHORT GUIDANCE FOR THE CONSTRUCTION, INSTALATION AND REMOVAL OF PINNA NOBILIS LARVAL COLLECTORS D. K. Kersting1,2, I. E. Hendriks3 1 Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Institut de Recerca de la Biodiversitat (IRBIO), Universitat de Barcelona, Spain. 2 Working Group on Geobiology and Anthropocene Research, Institute of Geological Sciences, Freie Universität Berlin, Germany. 3 Global Change Research Group, Mediterranean Institute for Advanced Studies (IMEDEA, CSIC-UIB), Esporles, Spain 1 CONTEXT An unprecedented mass mortality event is impacting Pinna nobilis populations throughout the Mediterranean Sea (https://www.iucn.org/news/mediterranean/201907/mediterranean-noble-pen-shell- crisis-pinna-nobilis-june-2019-update; Vázquez-Luis et al. 2017). The eventual recovery of impacted populations will depend mainly on the existence of unimpacted populations, resistant individuals and recruitment. Therefore, it is extremely important to assess larval recruitment to evaluate if larvae coming from unaffected sites or resistant individuals are reaching the impacted areas, thus potentially contributing to eventual recoveries. Larval collectors have been successfully used to assess P. nobilis recruitment in different contexts and areas (Cabanellas-Reboredo et al. 2009, Kersting & García-March 2017, Wesselmann et al. 2018). Additionally, if needed, this methodology might eventually be used to provide juveniles to restock populations (Kersting & García-March 2017). Here we describe how to construct, install and remove larval collectors in order to assess larval settlement in P. nobilis. CONSTRUCTION Collector bags The collector bags consist of entangled nylon filament, onion bags or any similar material composed of fine filaments that endure underwater, placed inside polyethylene (or similar plastic) mesh bags (Fig. -
Turkish Journal of Maritime and Marine Sciences Volume: 7 Issue: 1 (2021) 49-53
Short Communication (SC) DOI: 10.52998/trjmms.908055 Turkish Journal of Maritime and Marine Sciences Volume: 7 Issue: 1 (2021) 49-53 The First Occurrence of the Pen Shell Pinna nobilis (Linnaeus, 1758) in the Samandağ coast, the northeastern Mediterranean Kuzeydoğu Akdeniz Samandağ Sahillerinde Delici Midye Pinna nobilis (Linnaeus, 1758)’in İlk Kaydı Türk Denizcilik ve Deniz Bilimleri Dergisi Cilt: 7 Sayı: 1 (2021) 49-53 Cemal TURAN1,* , Servet Ahmet DOĞDU1 1İskenderun Technical University, Faculty of Marine Sciences and Technology, Molecular Ecology and Fisheries Laboratuary, 31200, Hatay, Turkey ABSTRACT The pen shell Pinna nobilis is distributed in the northwest area of the Mediterranean and the Aegean Sea. In this study, on September 9, 2020, one specimen of Pinna nobilis was observed during scuba diving at 16 m depth from Samandag coast (36.259444° N, 35.810111° E) in the northeastern Mediterranean. In this region, the presence of P. nobilis has never been previously recorded, and this new record confirms the presence of a new location in the northeastern Mediterranean Sea. Keywords: Bivalve, Pinna nobilis, pen shell, new location Article Info Received: 01 April 2021 Revised: 04 May 2021 Accepted: 08 May 2021 * (corresponding author) E-mail: [email protected] To cite this article: Turan, C., Doğdu, S.A., (2021). The First Occurrence of the Pen Shell, Pinna nobilis (Linnaeus, 1758) in the Samandağ coast, the northeastern Mediterranean, Turkish Journal of Maritime and Marine Science 7 (1): 49-53, DOI: https://doi.org/10.52998/trjmms.908055. 49 Turan and Doğdu, Turkish Journal of Maritime and Marine Sciences, 7(1): 49-53 ÖZET Delici midye Pinna nobilis Akdeniz'in kuzeybatı bölgesinde ve Ege Denizi'nde dağılım göstermektedir.