Interactions of Bunias Orientalis Plant Chemotypes and Fungal Pathogens with Different Host Specificity in Vivo and in Vitro
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Bunias Erucago
Weed Risk Assessment for Bunias United States erucago L. (Brassicaceae) – Southern Department of warty cabbage Agriculture Animal and Plant Health Inspection Service December 6, 2016 Version 1 Left: Yellow flowers of Bunias erucago. Right: Bunias erucago seeds are contained in this very distinctive fruit. Photographs courtesy of Ferran Turmo i Gort (Turmo i Gort, 2014). Agency Contact: Plant Epidemiology and Risk Analysis Laboratory Center for Plant Health Science and Technology Plant Protection and Quarantine Animal and Plant Health Inspection Service United States Department of Agriculture 1730 Varsity Drive, Suite 300 Raleigh, NC 27606 Weed Risk Assessment for Bunias erucago Introduction Plant Protection and Quarantine (PPQ) regulates noxious weeds under the authority of the Plant Protection Act (7 U.S.C. § 7701-7786, 2000) and the Federal Seed Act (7 U.S.C. § 1581-1610, 1939). A noxious weed is defined as “any plant or plant product that can directly or indirectly injure or cause damage to crops (including nursery stock or plant products), livestock, poultry, or other interests of agriculture, irrigation, navigation, the natural resources of the United States, the public health, or the environment” (7 U.S.C. § 7701-7786, 2000). We use the PPQ weed risk assessment (WRA) process (PPQ, 2015) to evaluate the risk potential of plants, including those newly detected in the United States, those proposed for import, and those emerging as weeds elsewhere in the world. The PPQ WRA process includes three analytical components that together describe the risk profile of a plant species (risk potential, uncertainty, and geographic potential; PPQ, 2015). At the core of the process is the predictive risk model that evaluates the baseline invasive/weed potential of a plant species using information related to its ability to establish, spread, and cause harm in natural, anthropogenic, and production systems (Koop et al., 2012). -
Identification and Characterization of Alternaria Species Causing Leaf Spot
Eur J Plant Pathol (2017) 149:401–413 DOI 10.1007/s10658-017-1190-0 Identification and characterization of Alternaria species causing leaf spot on cabbage, cauliflower, wild and cultivated rocket by using molecular and morphological features and mycotoxin production Ilenia Siciliano & Giovanna Gilardi & Giuseppe Ortu & Ulrich Gisi & Maria Lodovica Gullino & Angelo Garibaldi Accepted: 22 February 2017 /Published online: 11 March 2017 # Koninklijke Nederlandse Planteziektenkundige Vereniging 2017 Abstract Alternaria species are common pathogens of Keywords Crucifers . Toxins . Leaf spot . Tenuazonic fruit and vegetables able to produce secondary metabo- acid lites potentially affecting human health. Twenty-nine isolates obtained from cabbage, cauliflower, wild and cultivated rocket were characterized and identified Introduction based on sporulation pattern and virulence; the phylo- β genetic analysis was based on the -tubulin gene. Most Alternaria species are saprophytes and ubiquitous Isolates were identified as A. alternata, A. tenuissima, in the environment, however some are plant pathogenic, A. arborescens, A. brassicicola and A. japonica. inducing diseases on a large variety of economically Pathogenicity was evaluated on plants under greenhouse important crops like cereals, oil-crops, vegetables and conditions. Two isolates showed low level of virulence fruits (Pitt and Hocking, 1997). Most Alternaria spp. on cultivated rocket while the other isolates showed produce chains of conidia with transverse and longitu- medium or high level of virulence. Isolates were also dinal septa with a tapering apical cell. Conidial size, characterized for their mycotoxin production on a mod- presence and size of a beak, the pattern of catenation ified Czapek-Dox medium. Production of the five and longitudinal and transverse septation are key taxo- Alternaria toxins, tenuazonic acid, alternariol, nomic features for this genus (Joly 1964; Ellis 1971 and alternariol monomethyl ether, altenuene and tentoxin 1976, Simmons 1992). -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Alien Flora of Europe: Species Diversity, Temporal Trends, Geographical Patterns and Research Needs
Preslia 80: 101–149, 2008 101 Alien flora of Europe: species diversity, temporal trends, geographical patterns and research needs Zavlečená flóra Evropy: druhová diverzita, časové trendy, zákonitosti geografického rozšíření a oblasti budoucího výzkumu Philip W. L a m b d o n1,2#, Petr P y š e k3,4*, Corina B a s n o u5, Martin H e j d a3,4, Margari- taArianoutsou6, Franz E s s l7, Vojtěch J a r o š í k4,3, Jan P e r g l3, Marten W i n t e r8, Paulina A n a s t a s i u9, Pavlos A n d r i opoulos6, Ioannis B a z o s6, Giuseppe Brundu10, Laura C e l e s t i - G r a p o w11, Philippe C h a s s o t12, Pinelopi D e l i p e t - rou13, Melanie J o s e f s s o n14, Salit K a r k15, Stefan K l o t z8, Yannis K o k k o r i s6, Ingolf K ü h n8, Hélia M a r c h a n t e16, Irena P e r g l o v á3, Joan P i n o5, Montserrat Vilà17, Andreas Z i k o s6, David R o y1 & Philip E. H u l m e18 1Centre for Ecology and Hydrology, Hill of Brathens, Banchory, Aberdeenshire AB31 4BW, Scotland, e-mail; [email protected], [email protected]; 2Kew Herbarium, Royal Botanic Gardens Kew, Richmond, Surrey, TW9 3AB, United Kingdom; 3Institute of Bot- any, Academy of Sciences of the Czech Republic, CZ-252 43 Průhonice, Czech Republic, e-mail: [email protected], [email protected], [email protected], [email protected]; 4Department of Ecology, Faculty of Science, Charles University, Viničná 7, CZ-128 01 Praha 2, Czech Republic; e-mail: [email protected]; 5Center for Ecological Research and Forestry Applications, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain, e-mail: [email protected], [email protected]; 6University of Athens, Faculty of Biology, Department of Ecology & Systematics, 15784 Athens, Greece, e-mail: [email protected], [email protected], [email protected], [email protected], [email protected]; 7Federal Environment Agency, Department of Nature Conservation, Spittelauer Lände 5, 1090 Vienna, Austria, e-mail: [email protected]; 8Helmholtz Centre for Environmental Research – UFZ, Department of Community Ecology, Theodor-Lieser- Str. -
Second Contribution to the Vascular Flora of the Sevastopol Area
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Wulfenia Jahr/Year: 2015 Band/Volume: 22 Autor(en)/Author(s): Seregin Alexey P., Yevseyenkow Pavel E., Svirin Sergey A., Fateryga Alexander Artikel/Article: Second contribution to the vascular flora of the Sevastopol area (the Crimea) 33-82 © Landesmuseum für Kärnten; download www.landesmuseum.ktn.gv.at/wulfenia; www.zobodat.at Wulfenia 22 (2015): 33 – 82 Mitteilungen des Kärntner Botanikzentrums Klagenfurt Second contribution to the vascular flora of the Sevastopol area (the Crimea) Alexey P. Seregin, Pavel E. Yevseyenkov, Sergey A. Svirin & Alexander V. Fateryga Summary: We report 323 new vascular plant species for the Sevastopol area, an administrative unit in the south-western Crimea. Records of 204 species are confirmed by herbarium specimens, 60 species have been reported recently in literature and 59 species have been either photographed or recorded in field in 2008 –2014. Seventeen species and nothospecies are new records for the Crimea: Bupleurum veronense, Lemna turionifera, Typha austro-orientalis, Tyrimnus leucographus, × Agrotrigia hajastanica, Arctium × ambiguum, A. × mixtum, Potamogeton × angustifolius, P. × salicifolius (natives and archaeophytes); Bupleurum baldense, Campsis radicans, Clematis orientalis, Corispermum hyssopifolium, Halimodendron halodendron, Sagina apetala, Solidago gigantea, Ulmus pumila (aliens). Recently discovered Calystegia soldanella which was considered to be extinct in the Crimea is the most important confirmation of historical records. The Sevastopol area is one of the most floristically diverse areas of Eastern Europe with 1859 currently known species. Keywords: Crimea, checklist, local flora, taxonomy, new records A checklist of vascular plants recorded in the Sevastopol area was published seven years ago (Seregin 2008). -
Flora Mediterranea 26
FLORA MEDITERRANEA 26 Published under the auspices of OPTIMA by the Herbarium Mediterraneum Panormitanum Palermo – 2016 FLORA MEDITERRANEA Edited on behalf of the International Foundation pro Herbario Mediterraneo by Francesco M. Raimondo, Werner Greuter & Gianniantonio Domina Editorial board G. Domina (Palermo), F. Garbari (Pisa), W. Greuter (Berlin), S. L. Jury (Reading), G. Kamari (Patras), P. Mazzola (Palermo), S. Pignatti (Roma), F. M. Raimondo (Palermo), C. Salmeri (Palermo), B. Valdés (Sevilla), G. Venturella (Palermo). Advisory Committee P. V. Arrigoni (Firenze) P. Küpfer (Neuchatel) H. M. Burdet (Genève) J. Mathez (Montpellier) A. Carapezza (Palermo) G. Moggi (Firenze) C. D. K. Cook (Zurich) E. Nardi (Firenze) R. Courtecuisse (Lille) P. L. Nimis (Trieste) V. Demoulin (Liège) D. Phitos (Patras) F. Ehrendorfer (Wien) L. Poldini (Trieste) M. Erben (Munchen) R. M. Ros Espín (Murcia) G. Giaccone (Catania) A. Strid (Copenhagen) V. H. Heywood (Reading) B. Zimmer (Berlin) Editorial Office Editorial assistance: A. M. Mannino Editorial secretariat: V. Spadaro & P. Campisi Layout & Tecnical editing: E. Di Gristina & F. La Sorte Design: V. Magro & L. C. Raimondo Redazione di "Flora Mediterranea" Herbarium Mediterraneum Panormitanum, Università di Palermo Via Lincoln, 2 I-90133 Palermo, Italy [email protected] Printed by Luxograph s.r.l., Piazza Bartolomeo da Messina, 2/E - Palermo Registration at Tribunale di Palermo, no. 27 of 12 July 1991 ISSN: 1120-4052 printed, 2240-4538 online DOI: 10.7320/FlMedit26.001 Copyright © by International Foundation pro Herbario Mediterraneo, Palermo Contents V. Hugonnot & L. Chavoutier: A modern record of one of the rarest European mosses, Ptychomitrium incurvum (Ptychomitriaceae), in Eastern Pyrenees, France . 5 P. Chène, M. -
New National and Regional Vascular Plant Records, 3 Alla V
Botanica Pacifica. A journal of plant science and conservation. 2021. 10(1): 85–108 DOI: 10.17581/bp.2021.10110 Findings to the flora of Russia and adjacent countries: New national and regional vascular plant records, 3 Alla V. Verkhozina1*, Roman Yu. Biryukov2, Elena S. Bogdanova3, Victoria V. Bondareva3, Dmitry V. Chernykh2,4, Nikolay V. Dorofeev1, Vladimir I. Dorofeyev5, Alexandr L. Ebel6,7, Petr G. Efimov5, Andrey N. Efremov8, Andrey S. Erst6,7, Alexander V. Fateryga9, Natalia 10,11 12 4,6 1 Siberian Institute of Plant Physiology and S. Gamova , Valerii A. Glazunov , Polina D. Gudkova , Inom J. Biochemistry SB RAS, Irkutsk, Russia Juramurodov13,14,15, Olga А. Kapitonova16,17, Alexey A. Kechaykin4, 2 Institute for Water and Environmental Anatoliy A. Khapugin18,19, Petr A. Kosachev20, Ludmila I. Krupkina5, Problems SB RAS, Barnaul, Russia 21 18 15,22 3 Mariia A. Kulagina , Igor V. Kuzmin , Lian Lian , Guljamilya A. Institute of Ecology of the Volga River 23 23 24 Basin – Branch of Samara Federal Research Koychubekova , Georgy A. Lazkov , Alexander N. Luferov , Olga Scientific Center RAS, Togliatti, Russia A. Mochalova25, Ramazan A. Murtazaliev26,27, Viktor N. Nesterov3, 4 Altai State University, Barnaul, Russia Svetlana A. Nikolaenko12, Lyubov A. Novikova28, Svetlana V. Ovchin- 5 Komarov Botanical Institute RAS, nikova7, Nataliya V. Plikina29, Sergey V. Saksonov†, Stepan A. Sena- St. Petersburg, Russia tor30, Tatyana B. Silaeva31, Guzyalya F. Suleymanova32, Hang Sun14, 6 National Research Tomsk State University, Dmitry V. Tarasov1, Komiljon Sh. Tojibaev13, Vladimir M. Vasjukov3, Tomsk, Russia 15,22 7 2,33 7 Wei Wang , Evgenii G. Zibzeev , Dmitry V. -
Comparative Genomics of Alternaria Species Provides Insights Into the Pathogenic Lifestyle of Alternaria Brassicae – a Pathoge
Rajarammohan et al. BMC Genomics (2019) 20:1036 https://doi.org/10.1186/s12864-019-6414-6 RESEARCH ARTICLE Open Access Comparative genomics of Alternaria species provides insights into the pathogenic lifestyle of Alternaria brassicae – a pathogen of the Brassicaceae family Sivasubramanian Rajarammohan1,2, Kumar Paritosh3, Deepak Pental3 and Jagreet Kaur1* Abstract Background: Alternaria brassicae, a necrotrophic pathogen, causes Alternaria Leaf Spot, one of the economically important diseases of Brassica crops. Many other Alternaria spp. such as A. brassicicola and A. alternata are known to cause secondary infections in the A. brassicae-infected Brassicas. The genome architecture, pathogenicity factors, and determinants of host-specificity of A. brassicae are unknown. In this study, we annotated and characterised the recently announced genome assembly of A. brassicae and compared it with other Alternaria spp. to gain insights into its pathogenic lifestyle. Results: We also sequenced the genomes of two A. alternata isolates that were co-infecting B. juncea using Nanopore MinION sequencing for additional comparative analyses within the Alternaria genus. Genome alignments within the Alternaria spp. revealed high levels of synteny between most chromosomes with some intrachromosomal rearrangements. We show for the first time that the genome of A. brassicae, a large-spored Alternaria species, contains a dispensable chromosome. We identified 460 A. brassicae-specific genes, which included many secreted proteins and effectors. Furthermore, we have identified the gene clusters responsible for the production of Destruxin-B, a known pathogenicity factor of A. brassicae. Conclusion: The study provides a perspective into the unique and shared repertoire of genes within the Alternaria genus and identifies genes that could be contributing to the pathogenic lifestyle of A. -
Alternaria Brassicicola – Brassicaceae Pathosystem: Insights Into the Infection Process and Resistance Mechanisms Under Optimized Artificial Bio-Assay
Eur J Plant Pathol https://doi.org/10.1007/s10658-018-1548-y Alternaria brassicicola – Brassicaceae pathosystem: insights into the infection process and resistance mechanisms under optimized artificial bio-assay Marzena Nowakowska & Małgorzata Wrzesińska & Piotr Kamiński & Wojciech Szczechura & Małgorzata Lichocka & Michał Tartanus & Elżbieta U. Kozik & Marcin Nowicki Accepted: 10 July 2018 # The Author(s) 2018 Abstract Heavy losses incited yearly by Alternaria that the plant genotype was crucial in determining its brassicicola on the vegetable Brassicaceae have response to the pathogen. The bio-assays for prompted our search for sources of genetic resistance A. brassicicola resistance were run under more stringent against the pathogen and the resultant disease, dark leaf lab conditions than the field tests (natural epidemics), spot. We optimized several parameters to test the perfor- resulting in identification of two interspecific hybrids mance of the plants under artificial inoculations with this that might be used in breeding programs. Based on the pathogen, including leaf age and position, inoculum results of the biochemical analyses, reactive oxygen concentration, and incubation temperature. Using these species and red-ox enzymes interplay has been suggested optimized conditions, we screened a collection of 38 to determine the outcome of the plant-A. brassicicola Brassicaceae cultigens with two methods (detached leaf interplay. Confocal microscopy analyses of the leaf sam- and seedlings). Our results show that either method can ples provided data on the pathogen mode of infection: be used for the A. brassicicola resistance breeding, and Direct epidermal infection or stomatal attack were relat- ed to plant resistance level against A. brassicicola among Electronic supplementary material The online version of this the cultigens tested. -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
Isolation, Pathogenicity and Effect of Different Culture Media on Growth and Sporulation of Alternaria Brassicae (Berk.) Sacc
Int.J.Curr.Microbiol.App.Sci (2019) 8(4): 1900-1910 International Journal of Current Microbiology and Applied Sciences ISSN: 2319-7706 Volume 8 Number 04 (2019) Journal homepage: http://www.ijcmas.com Original Research Article https://doi.org/10.20546/ijcmas.2019.804.223 Isolation, Pathogenicity and Effect of Different Culture Media on Growth and Sporulation of Alternaria brassicae (berk.) Sacc. causing Alternaria Leaf Spot Disease in Cauliflower H.T. Valvi, J.J. Kadam and V.R. Bangar* Department of Plant Pathology, College of Agriculture, Dapoli, India Dr. Balasaheb Sawant Konkan Krishi Vidyapeeth, Dapoli, Dist., Ratnagiri- 415 712(M.S.), India *Corresponding author ABSTRACT The leaf spot disease of Cauliflower (Brassica oleracae L. var. Botrytis) caused by A. brassicae (Berk.) Sacc. was noticed in moderate to severe form on farm of College of K e yw or ds Agriculture Engineering and Technology, Dapoli during 2014-2016. The pathogenic fungus was isolated on potato dextrose agar medium from infected leaves of cauliflower. Caulif lower, Isolation, Pathogenicity, The pathogenicity of the isolated fungus was proved by inoculating healthy seedlings of Alternaria brassicae cauliflower. On the basis of typical symptoms on foliage, microscopic observations and (B erk.) Sacc., Culture cultural characteristics of the fungus, it was identified as Alternaria spp. The Chief media, Sporulation Mycologist, Agharkar Research Institute, Pune identified the pathogenic fungus as and mycelial growth Alternaria brassicae (Berk.) Sacc. Eight culture media were tested among that, the potato Article Info dextrose agar medium was found most suitable and encouraged maximum radial mycelial growth (90.00 mm) of A. brassicae. The second best culture medium found was host leaf Accepted: extract agar medium (87.00 mm). -
ANATOMICAL CHARACTERISTICS and ECOLOGICAL TRENDS in the XYLEM and PHLOEM of BRASSICACEAE and RESEDACAE Fritz Hans Schweingruber
IAWA Journal, Vol. 27 (4), 2006: 419–442 ANATOMICAL CHARACTERISTICS AND ECOLOGICAL TRENDS IN THE XYLEM AND PHLOEM OF BRASSICACEAE AND RESEDACAE Fritz Hans Schweingruber Swiss Federal Research Institute for Forest, Snow and Landscape, CH-8903 Birmensdorf, Switzerland (= corresponding address) SUMMARY The xylem and phloem of Brassicaceae (116 and 82 species respectively) and the xylem of Resedaceae (8 species) from arid, subtropical and tem- perate regions in Western Europe and North America is described and ana- lysed, compared with taxonomic classifications, and assigned to their ecological range. The xylem of different life forms (herbaceous plants, dwarf shrubs and shrubs) of both families consists of libriform fibres and short, narrow vessels that are 20–50 μm in diameter and have alter- nate vestured pits and simple perforations. The axial parenchyma is para- tracheal and, in most species, the ray cells are exclusively upright or square. Very few Brassicaceae species have helical thickening on the vessel walls, and crystals in fibres. The xylem anatomy of Resedaceae is in general very similar to that of the Brassicaceae. Vestured pits occur only in one species of Resedaceae. Brassicaceae show clear ecological trends: annual rings are usually dis- tinct, except in arid and subtropical lowland zones; semi-ring-porosity decreases from the alpine zone to the hill zone at lower altitude. Plants with numerous narrow vessels are mainly found in the alpine zone. Xylem without rays is mainly present in plants growing in the Alps, both at low and high altitudes. The reaction wood of the Brassicaceae consists primarily of thick-walled fibres, whereas that of the Resedaceae contains gelatinous fibres.