Volume 2, Chapter 4-3: Invertebrates: Nematodes
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Bryophytes: Indicators and Monitoring Agents of Pollution
NeBIO (2010) Vol. 1(1) Govindapyari et al . 35-41 GENERAL ARTICLE Bryophytes: indicators and monitoring agents of pollution H. Govindapyari, M. Leleeka, M. Nivedita and P. L. Uniyal Department of Botany, University of Delhi, Delhi – 110 007 Author for correspondence: [email protected], [email protected] Received: 17 September 2009; Revised and Accepted: 2 January 2010 ABSTRACT Bryophyte proves to be a potential bio-indicator of air pollution. The habitat diversity, structural simplicity, totipotency, rapid rate of multiplication and high metal accumulation capacity make bryophytes an ideal organism for pollution studies. The decline and absence of bryophyte populations especially epiphytes is a phenomenon primarily induced by air pollution caused by gaseous and particulate pollutants. Bryophytes are reliable indicators and monitors of air pollution as they are easy to handle and show a vast range of specific sensitivity and visible symptoms to pollutants greatly exceeding that of higher plants. KEY WORDS: Bryophyte, bio-indicator, air pollution, pollutants. Bryophytes are green land plants which lack a • which have the capacity to absorb and retain vascular system and are simple both morpho- pollutants in quantities much higher than those logically and anatomically. The growth potential in absorbed by other plant groups growing in the bryophytes is not as highly polarized as vascular same habitat. These plants trap and prevent plants. Bryophytes grow in a variety of habitats recycling of such pollutants in the ecosystem especially in moist places on soil, rocks, trunks and for different periods of time. Analysis of such branches of trees and fallen log. They obtain plants gives a fair idea about the degree of nutrients directly from substances dissolved in metal pollution. -
Nematode, Ditylenchus, Stem and Bulb, Meloidogyne, Root Knot
BIOLOGY AND CONTROL OF STEM AND ROOT KNOT NEMATODES r Becky B. Westerdahl1 Abstract: Plant parasitic nematodes are nonsegmented-microscopic roundworms which are frequently present in alfalfa fields. Although more than 10 different genera have been found in alfalfa fields in California, two (stem and bulb, and root knot) are most commonly associated with damage. A management plan to fit a particular growing situation should be developed using a combination of techniques including: planting site selection, certified seed, clean equipment, weed and irrigation management, resistant varieties, crop rotation, fallow, organic amendments and chemical nematicides. Ke~words nematode, Ditylenchus, stem and bulb, Meloidogyne, root knot, INTRODUCTION Plant parasitic nematodes are nonsegmented-microscopic roundworms which are frequently present in alfalfa fields. Whether or not alfalfa is to be planted in a nematode infested area, a grower should be knowledgeable about nematodes. If nematodes are present, both pre and postplant management strategies should be developed for pathogenic species. If an alfalfa field or a potential planting site is not infested, a grower should be aware of techniques available to prevent the introduction of harmful species. For growers to carry on a nematode pest management program they need to be familiar with (1) nematode biology; (2) symptoms and signs of nematode f damage; (3) how nematodes injure plants; (4) how to sample for nematodes; and (5) the principles underlying various management techniques including: planting site selection, the use of certified seed, the importance of using clean equipment and irrigation water, weed management, the use of resistant varieties, crop rotation, fallow, organic amendments, and chemical nematicides. -
Metabolites from Nematophagous Fungi and Nematicidal Natural Products from Fungi As an Alternative for Biological Control
Appl Microbiol Biotechnol (2016) 100:3799–3812 DOI 10.1007/s00253-015-7233-6 MINI-REVIEW Metabolites from nematophagous fungi and nematicidal natural products from fungi as an alternative for biological control. Part I: metabolites from nematophagous ascomycetes Thomas Degenkolb1 & Andreas Vilcinskas1,2 Received: 4 October 2015 /Revised: 29 November 2015 /Accepted: 2 December 2015 /Published online: 29 December 2015 # The Author(s) 2015. This article is published with open access at Springerlink.com Abstract Plant-parasitic nematodes are estimated to cause Keywords Phytoparasitic nematodes . Nematicides . global annual losses of more than US$ 100 billion. The num- Oligosporon-type antibiotics . Nematophagous fungi . ber of registered nematicides has declined substantially over Secondary metabolites . Biocontrol the last 25 years due to concerns about their non-specific mechanisms of action and hence their potential toxicity and likelihood to cause environmental damage. Environmentally Introduction beneficial and inexpensive alternatives to chemicals, which do not affect vertebrates, crops, and other non-target organisms, Nematodes as economically important crop pests are therefore urgently required. Nematophagous fungi are nat- ural antagonists of nematode parasites, and these offer an eco- Among more than 26,000 known species of nematodes, 8000 physiological source of novel biocontrol strategies. In this first are parasites of vertebrates (Hugot et al. 2001), whereas 4100 section of a two-part review article, we discuss 83 nematicidal are parasites of plants, mostly soil-borne root pathogens and non-nematicidal primary and secondary metabolites (Nicol et al. 2011). Approximately 100 species in this latter found in nematophagous ascomycetes. Some of these sub- group are considered economically important phytoparasites stances exhibit nematicidal activities, namely oligosporon, of crops. -
An Ecological Study of Ditylenchus Dipsaci (Kuhn) Filipjev
Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 5-1966 An Ecological Study of Ditylenchus Dipsaci (Kuhn) Filipjev. in a Field of Alfalfa Shu-Ten Tseng Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Plant Sciences Commons Recommended Citation Tseng, Shu-Ten, "An Ecological Study of Ditylenchus Dipsaci (Kuhn) Filipjev. in a Field of Alfalfa" (1966). All Graduate Theses and Dissertations. 2872. https://digitalcommons.usu.edu/etd/2872 This Thesis is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. AN ECOLOGICAL STUDY OF DITYLENCHUS DIPSACI (KUHN) FILIPJEV. IN A FIELD OF ALFALFA by Shu-ten Tseng A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE in Plant Science UTAH STATE UNIVERSITY Logan, Utah 1966 ACKNOWLEDGMENT Th e author wishes to express his hearty appreciation t o : Dr. Keith R. Allred and Dr. Gerald D. Griffen for their constant encour agement and advice in carrying ou t this s tudy ; Dr. Rex L. Hurst f or his valuable help in statistical analysis; Dr.DeVer e R. McAllister for his kind arrangement which made this study possible . Shu-Ten Tseng TABLE OF CONTENTS INTRODUCTION . REVIEW OF LITERATURE 3 History of alfalfa stem nematode 3 Morphology . 4 Life cycle of Dityl e nchus dipsaci 4 The influence of environme nt 6 Moisture 6 Ae ration 7 Temperature 8 Soil t ype 9 Ditylenchus dipsaci population in soil and its r e lation wi th damage 10 Some aspect of behavior of ~· dipsaci 12 Orientation and invasion 12 Quiescence and l ongevi t y 13 Plant - Parasite relation . -
Globally Widespread Bryophytes, but Rare in Europe
Portugaliae Acta Biol. 20: 11-24. Lisboa, 2002 GLOBALLY WIDESPREAD BRYOPHYTES, BUT RARE IN EUROPE Tomas Hallingbäck Swedish Threatened Species Unit, P.O. Box 7007, SE-75007 Uppsala, Sweden. [email protected] Hallingbäck, T. (2002). Globally widespread bryophytes, but rare in Europe. Portugaliae Acta Biol. 20: 11-24. The need to save not only globally threatened species, but also regionally rare and declining species in Europe is discussed. One rationale of red-listing species regionally is to be preventive and to counteract the local species extinction process. There is also a value in conserving populations at the edge of their geographical range and this is discussed in terms of genetic variation. Another reason is the political willingness of acting locally rather than globally. Among the rare and non-endemic species in Europe, some are rare and threatened both in Europe and elsewhere, others are more common outside Europe and a third group is locally common within Europe but rare in the major part. How much conservation effort should be put on these three European non-endemic species groups is briefly discussed, as well as why bryophytes are threatened. A discussion is given, for example, of how a smaller total distribution range, decreasing density of localities, smaller sites, less substrate and lower habitat quality affect the survival of sensitive species. This is also compared with species that have either high or low dispersal capacity or different longevity of either vegetative parts or spores. Examples from Sweden are given. Key words: Bryophytes, rarity, Europe, dispersal capacity, Sweden. Hallingbäck, T. (2002). -
Occurrence of Ditylenchus Destructorthorne, 1945 on a Sand
Journal of Plant Protection Research ISSN 1427-4345 ORIGINAL ARTICLE Occurrence of Ditylenchus destructor Thorne, 1945 on a sand dune of the Baltic Sea Renata Dobosz1*, Katarzyna Rybarczyk-Mydłowska2, Grażyna Winiszewska2 1 Entomology and Animal Pests, Institute of Plant Protection – National Research Institute, Poznan, Poland 2 Nematological Diagnostic and Training Centre, Museum and Institute of Zoology Polish Academy of Sciences, Warsaw, Poland Vol. 60, No. 1: 31–40, 2020 Abstract DOI: 10.24425/jppr.2020.132206 Ditylenchus destructor is a serious pest of numerous economically important plants world- wide. The population of this nematode species was isolated from the root zone of Ammo- Received: July 11, 2019 phila arenaria on a Baltic Sea sand dune. This population’s morphological and morphomet- Accepted: September 27, 2019 rical characteristics corresponded to D. destructor data provided so far, except for the stylet knobs’ height (2.1–2.9 vs 1.3–1.8) and their arrangement (laterally vs slightly posteriorly *Corresponding address: sloping), the length of a hyaline part on the tail end (0.8–1.8 vs 1–2.9), the pharyngeal gland [email protected] arrangement in relation to the intestine (dorsal or ventral vs dorsal, ventral or lateral) and the appearance of vulval lips (smooth vs annulated). Ribosomal DNA sequence analysis confirmed the identity of D. destructor from a coastal dune. Keywords: Ammophila arenaria, internal transcribed spacer (ITS), potato rot nematode, 18S, 28S rDNA Introduction Nematodes from the genus Ditylenchus Filipjev, 1936, arachis Zhang et al., 2014, both of which are pests of are found in soil, in the root zone of arable and wild- peanut (Arachis hypogaea L.), Ditylenchus destruc- -growing plants, and occasionally in the tissues of un- tor Thorne, 1945 which feeds on potato (Solanum tu- derground or aboveground parts (Brzeski 1998). -
Molecular Phylogeny of Chinese Thuidiaceae with Emphasis on Thuidium and Pelekium
Molecular Phylogeny of Chinese Thuidiaceae with emphasis on Thuidium and Pelekium QI-YING, CAI1, 2, BI-CAI, GUAN2, GANG, GE2, YAN-MING, FANG 1 1 College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China. 2 College of Life Science, Nanchang University, 330031 Nanchang, China. E-mail: [email protected] Abstract We present molecular phylogenetic investigation of Thuidiaceae, especially on Thudium and Pelekium. Three chloroplast sequences (trnL-F, rps4, and atpB-rbcL) and one nuclear sequence (ITS) were analyzed. Data partitions were analyzed separately and in combination by employing MP (maximum parsimony) and Bayesian methods. The influence of data conflict in combined analyses was further explored by two methods: the incongruence length difference (ILD) test and the partition addition bootstrap alteration approach (PABA). Based on the results, ITS 1& 2 had crucial effect in phylogenetic reconstruction in this study, and more chloroplast sequences should be combinated into the analyses since their stability for reconstructing within genus of pleurocarpous mosses. We supported that Helodiaceae including Actinothuidium, Bryochenea, and Helodium still attributed to Thuidiaceae, and the monophyletic Thuidiaceae s. lat. should also include several genera (or species) from Leskeaceae such as Haplocladium and Leskea. In the Thuidiaceae, Thuidium and Pelekium were resolved as two monophyletic groups separately. The results from molecular phylogeny were supported by the crucial morphological characters in Thuidiaceae s. lat., Thuidium and Pelekium. Key words: Thuidiaceae, Thuidium, Pelekium, molecular phylogeny, cpDNA, ITS, PABA approach Introduction Pleurocarpous mosses consist of around 5000 species that are defined by the presence of lateral perichaetia along the gametophyte stems. Monophyletic pleurocarpous mosses were resolved as three orders: Ptychomniales, Hypnales, and Hookeriales (Shaw et al. -
Description of Seinura Italiensis N. Sp.(Tylenchomorpha
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-018 e2020-18 | Vol. 52 Description of Seinura italiensis n. sp. (Tylenchomorpha: Aphelenchoididae) found in the medium soil imported from Italy Jianfeng Gu1,*, Munawar Maria2, 1 3 Lele Liu and Majid Pedram Abstract 1Technical Centre of Ningbo Seinura italiensis n. sp. isolated from the medium soil imported from Customs (Ningbo Inspection and Italy is described and illustrated using morphological and molecular Quarantine Science Technology data. The new species is characterized by having short body (477 Academy), No. 8 Huikang, Ningbo, (407-565) µm and 522 (469-590) µm for males and females, respec- 315100, Zhejiang, P.R. China. tively), three lateral lines, stylet lacking swellings at the base, and ex- 2Laboratory of Plant Nematology, cretory pore at the base or slightly anterior to base of metacorpus; Institute of Biotechnology, College females have 58.8 (51.1-69.3) µm long post-uterine sac (PUS), elon- of Agriculture and Biotechnology, gate conical tail with its anterior half conoid, dorsally convex, and Zhejiang University, Hangzhou, ventrally slightly concave and the posterior half elongated, narrower, 310058, Zhejiang, P.R. China. with finely rounded to pointed tip and males having seven caudal papillae and 14.1 (12.6-15.0) µm long spicules. Morphologically, the 3Department of Plant Pathology, new species is similar to S. caverna, S. chertkovi, S. christiei, S. hyr- Faculty of Agriculture, Tarbiat cania, S. longicaudata, S. persica, S. steineri, and S. tenuicaudata. Modares University, Tehran, Iran. The differences of the new species with aforementioned species are *E-mail: [email protected] discussed. -
Report of the Botanist 1868
) ;:; HEW Y««li BOTAPilCAL ( D. OAtOEN REPORT OF THE BOTANIST. Dr. S. B. WoolWORTH, Secretary of the Regents : Sir—The following report for 1868 is respectfully su])initted : The specimens of plants known as the " Beck Collection " have been taken from the folios, poisoned, and arranged in the cabinet case prepared for them. A few folios, containing the undistributed spec i mens of the collection, jet remain, there not being room for them in the case without too close pressing. The unmounted duplicate specimens of the State Herbarium have been arranged, with their proper labels, in the empty folios. The number of specimens* of the State collection that have been poisoned and mounted is about one thousand five hundred, representing four hundred and ten species, distributed as follows Phoenogamia, or flowering plants, one hundred and seventy-eight Cryptogamia, or flowerless plants, two hundred and thirty-two ; of which nine species are ferns, one lumdred and eighty mosses, and forty-three are liverworts. The names of the species are given in the accompanying list, marked A. In mounting the specimens of mosses, the species, so far as pos- sible, have been represented by series of specimens illustrating the different forms, variations in size, aspect, etc. In most instances a single plant has been separated from the tuft and placed by itself on the species sheet, that it may be seen individually as well as collect- ively. When the genus contains several or many species, the speci- mens of it have been prefaced by arranging a single plant of each species side by side on one sheet, thus giving, as it were, a synopsis <^^ of the genus. -
Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves
Journal of Nematology 48(1):28–33. 2016. Ó The Society of Nematologists 2016. Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves 1 1 1 2 LYNN K. CARTA, SHIGUANG LI, ANDREA M. SKANTAR, AND GEORGE NEWCOMBE Abstract: During a long-term, large network study of the ecology of plant endophytes in native habitats, various nematodes have been found. Two poplar species, Populus angustifolia (narrowleaf cottonwood) and Populus trichocarpa (black cottonwood), are important ecological and genomic models now used in ongoing plant–pathogen–endophyte interaction studies. In this study, two different aphe- lenchid nematodes within surface-sterilized healthy leaves of these two Populus spp. in northwestern North America were discovered. Nematodes were identified and characterized microscopically and molecularly with 28S ribosomal RNA (rRNA) and 18S rRNA molecular markers. From P. angustifolia, Aphelenchoides saprophilus was inferred to be closest to another population of A. saprophilus among sequenced taxa in the 18S tree. From P. trichocarpa, Laimaphelenchus heidelbergi had a 28S sequence only 1 bp different from that of a Portuguese population, and 1 bp different from the original Australian type population. The 28S and 18S rRNA trees of Aphelenchoides and Laima- phelenchus species indicated L. heidelbergi failed to cluster with three other Laimaphelenchus species, including the type species of the genus. Therefore, we support a conservative definition of the genus Laimaphelenchus, and consider these populations to belong to Aphelenchoides, amended as Aphelenchoides heidelbergi n. comb. This is the first report of these nematode species from within aboveground leaves. The presence of these fungal-feeding nematodes can affect the balance of endophytic fungi, which are important determinants of plant health. -
Tokorhabditis N. Gen
www.nature.com/scientificreports OPEN Tokorhabditis n. gen. (Rhabditida, Rhabditidae), a comparative nematode model for extremophilic living Natsumi Kanzaki1, Tatsuya Yamashita2, James Siho Lee3, Pei‑Yin Shih4,5, Erik J. Ragsdale6 & Ryoji Shinya2* Life in extreme environments is typically studied as a physiological problem, although the existence of extremophilic animals suggests that developmental and behavioral traits might also be adaptive in such environments. Here, we describe a new species of nematode, Tokorhabditis tufae, n. gen., n. sp., which was discovered from the alkaline, hypersaline, and arsenic‑rich locale of Mono Lake, California. The new species, which ofers a tractable model for studying animal‑specifc adaptations to extremophilic life, shows a combination of unusual reproductive and developmental traits. Like the recently described sister group Auanema, the species has a trioecious mating system comprising males, females, and self‑fertilizing hermaphrodites. Our description of the new genus thus reveals that the origin of this uncommon reproductive mode is even more ancient than previously assumed, and it presents a new comparator for the study of mating‑system transitions. However, unlike Auanema and almost all other known rhabditid nematodes, the new species is obligately live‑bearing, with embryos that grow in utero, suggesting maternal provisioning during development. Finally, our isolation of two additional, molecularly distinct strains of the new genus—specifcally from non‑extreme locales— establishes a comparative system for the study of extremophilic traits in this model. Extremophilic animals ofer a window into how development, sex, and behavior together enable resilience to inhospitable environments. A challenge to studying such animals has been to identify those amenable to labo- ratory investigation1,2. -
Hypnaceaeandpossiblyrelatedfn
Hikobial3:645-665.2002 Molecularphylo窪enyOfhypnobrJ/aleanmOssesasin化rredfroma lar淫e-scaledatasetofchlOroplastlbcL,withspecialre他rencetothe HypnaceaeandpOssiblyrelatedfnmilies1 HIRoMITsuBoTA,ToMoTsuGuARIKAwA,HIRoYuKIAKIYAMA,EFRAINDELuNA,DoLoREs GoNzALEz,MASANoBuHIGucHIANDHIRoNoRIDEGucHI TsuBoTA,H、,ARIKAwA,T,AKIYAMA,H,,DELuNA,E,GoNzALEz,,.,HIGucHI,M 4 &DEGucHI,H、2002.Molecularphylogenyofhypnobryaleanmossesasinferred fiPomalarge-scaledatasetofchloroplastr6cL,withspecialreferencetotheHypnaceae andpossiblyrelatedfamiliesl3:645-665. ▲ Phylogeneticrelationshipswithinthehypnobryaleanmosses(ie,theHypnales,Leuco- dontales,andHookeriales)havebeenthefbcusofmuchattentioninrecentyears Herewepresentphylogeneticinfierencesonthislargeclade,andespeciallyonthe Hypnaceaeandpossiblyrelatedftlmilies,basedonmaximumlikelihoodanalysisof l81r6cLsequences、Oursmdycorroboratesthat(1)theHypnales(sstr.[=sensu Vittl984])andLeucodontalesareeachnotmonophyleticentities、TheHypnalesand LeucodontalestogethercompriseawellsupportedsistercladetotheHookeriales;(2) theSematophyllaceae(s」at[=sensuTsubotaetaL2000,2001a,b])andPlagiothecia‐ ceae(s・str.[=sensupresentDareeachresolvedasmonophyleticgroups,whileno particularcladeaccommodatesallmembersoftheHypnaceaeandCryphaeaceae;and (3)theHypnaceaeaswellasitstypegenusノリDlwz"川tselfwerepolyphyletioThese resultsdonotconcurwiththesystemsofVitt(1984)andBuckandVitt(1986),who suggestedthatthegroupswithasinglecostawouldhavedivergedfiFomthehypnalean ancestoratanearlyevolutionarystage,fbllowedbythegroupswithadoublecosta (seealsoTsubotaetall999;Bucketal2000)OurresultsfiPomlikelihoodanalyses