(Erwinia Chrysanthemi 3937) Is a Pathogen of the Pea Aphid A.M
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The Hypercomplex Genome of an Insect Reproductive Parasite Highlights the Importance of Lateral Gene Transfer in Symbiont Biology
This is a repository copy of The hypercomplex genome of an insect reproductive parasite highlights the importance of lateral gene transfer in symbiont biology. White Rose Research Online URL for this paper: http://eprints.whiterose.ac.uk/164886/ Version: Published Version Article: Frost, C.L., Siozios, S., Nadal-Jimenez, P. et al. (4 more authors) (2020) The hypercomplex genome of an insect reproductive parasite highlights the importance of lateral gene transfer in symbiont biology. mBio, 11 (2). e02590-19. ISSN 2150-7511 https://doi.org/10.1128/mbio.02590-19 Reuse This article is distributed under the terms of the Creative Commons Attribution (CC BY) licence. This licence allows you to distribute, remix, tweak, and build upon the work, even commercially, as long as you credit the authors for the original work. More information and the full terms of the licence here: https://creativecommons.org/licenses/ Takedown If you consider content in White Rose Research Online to be in breach of UK law, please notify us by emailing [email protected] including the URL of the record and the reason for the withdrawal request. [email protected] https://eprints.whiterose.ac.uk/ OBSERVATION Ecological and Evolutionary Science crossm The Hypercomplex Genome of an Insect Reproductive Parasite Highlights the Importance of Lateral Gene Transfer in Symbiont Biology Crystal L. Frost,a Stefanos Siozios,a Pol Nadal-Jimenez,a Michael A. Brockhurst,b Kayla C. King,c Alistair C. Darby,a Gregory D. D. Hursta aInstitute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom bDepartment of Animal and Plant Sciences, University of Sheffield, Sheffield, United Kingdom cDepartment of Zoology, University of Oxford, Oxford, United Kingdom Crystal L. -
Genetics and Physiology of Motility by Photorhabdus Spp Brandye A
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Spring 2006 Genetics and physiology of motility by Photorhabdus spp Brandye A. Michaels University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation Michaels, Brandye A., "Genetics and physiology of motility by Photorhabdus spp" (2006). Doctoral Dissertations. 324. https://scholars.unh.edu/dissertation/324 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. GENETICS AND PHYSIOLOGY OF MOTILITY BYPHOTORHABDUS SPP. BY BRANDYE A. MICHAELS BS, Armstrong Atlantic State University, 1999 DISSERTATION Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Microbiology May, 2006 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. UMI Number: 3217433 INFORMATION TO USERS The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bleed-through, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. ® UMI UMI Microform 3217433 Copyright 2006 by ProQuest Information and Learning Company. -
Evolutionary Patchwork of an Insecticidal Toxin
Ruffner et al. BMC Genomics (2015) 16:609 DOI 10.1186/s12864-015-1763-2 RESEARCH ARTICLE Open Access Evolutionary patchwork of an insecticidal toxin shared between plant-associated pseudomonads and the insect pathogens Photorhabdus and Xenorhabdus Beat Ruffner1, Maria Péchy-Tarr2, Monica Höfte3, Guido Bloemberg4, Jürg Grunder5, Christoph Keel2* and Monika Maurhofer1* Abstract Background: Root-colonizing fluorescent pseudomonads are known for their excellent abilities to protect plants against soil-borne fungal pathogens. Some of these bacteria produce an insecticidal toxin (Fit) suggesting that they may exploit insect hosts as a secondary niche. However, the ecological relevance of insect toxicity and the mechanisms driving the evolution of toxin production remain puzzling. Results: Screening a large collection of plant-associated pseudomonads for insecticidal activity and presence of the Fit toxin revealed that Fit is highly indicative of insecticidal activity and predicts that Pseudomonas protegens and P. chlororaphis are exclusive Fit producers. A comparative evolutionary analysis of Fit toxin-producing Pseudomonas including the insect-pathogenic bacteria Photorhabdus and Xenorhadus, which produce the Fit related Mcf toxin, showed that fit genes are part of a dynamic genomic region with substantial presence/absence polymorphism and local variation in GC base composition. The patchy distribution and phylogenetic incongruence of fit genes indicate that the Fit cluster evolved via horizontal transfer, followed by functional integration of vertically transmitted genes, generating a unique Pseudomonas-specific insect toxin cluster. Conclusions: Our findings suggest that multiple independent evolutionary events led to formation of at least three versions of the Mcf/Fit toxin highlighting the dynamic nature of insect toxin evolution. -
Transitions in Symbiosis: Evidence for Environmental Acquisition and Social Transmission Within a Clade of Heritable Symbionts
The ISME Journal (2021) 15:2956–2968 https://doi.org/10.1038/s41396-021-00977-z ARTICLE Transitions in symbiosis: evidence for environmental acquisition and social transmission within a clade of heritable symbionts 1,2 3 2 4 2 Georgia C. Drew ● Giles E. Budge ● Crystal L. Frost ● Peter Neumann ● Stefanos Siozios ● 4 2 Orlando Yañez ● Gregory D. D. Hurst Received: 5 August 2020 / Revised: 17 March 2021 / Accepted: 6 April 2021 / Published online: 3 May 2021 © The Author(s) 2021. This article is published with open access Abstract A dynamic continuum exists from free-living environmental microbes to strict host-associated symbionts that are vertically inherited. However, knowledge of the forces that drive transitions in symbiotic lifestyle and transmission mode is lacking. Arsenophonus is a diverse clade of bacterial symbionts, comprising reproductive parasites to coevolving obligate mutualists, in which the predominant mode of transmission is vertical. We describe a symbiosis between a member of the genus Arsenophonus and the Western honey bee. The symbiont shares common genomic and predicted metabolic properties with the male-killing symbiont Arsenophonus nasoniae, however we present multiple lines of evidence that the bee 1234567890();,: 1234567890();,: Arsenophonus deviates from a heritable model of transmission. Field sampling uncovered spatial and seasonal dynamics in symbiont prevalence, and rapid infection loss events were observed in field colonies and laboratory individuals. Fluorescent in situ hybridisation showed Arsenophonus localised in the gut, and detection was rare in screens of early honey bee life stages. We directly show horizontal transmission of Arsenophonus between bees under varying social conditions. We conclude that honey bees acquire Arsenophonus through a combination of environmental exposure and social contacts. -
Identification of Photorhabdus Symbionts by MALDI-TOF Mass Spectrometry
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.10.901900; this version posted January 11, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Identification of Photorhabdus symbionts by MALDI-TOF mass spectrometry Virginia Hill1,2, Peter Kuhnert2, Matthias Erb1, Ricardo A. R. Machado1* 1 Institute of Plant Sciences, University of Bern, Switzerland 2Institute of Veterinary Bacteriology, Vetsuisse Faculty, University of Bern, Switzerland. *Correspondence: [email protected] Abstract Species of the bacterial genus Photorhabus live in a symbiotic relationship with Heterorhabditis entomopathogenic nematodes. Besides their use as biological control agents against agricultural pests, some Photorhabdus species are also a source of natural products and are of medical interest due to their ability to cause tissue infections and subcutaneous lesions in humans. Given the diversity of Photorhabdus species, rapid and reliable methods to resolve this genus to the species level are needed. In this study, we evaluated the potential of matrix-assisted laser desorption/ionization time-of flight mass spectrometry (MALDI-TOF MS) for the identification of Photorhabdus species. To this end, we established a collection of 55 isolates consisting of type strains and multiple field strains that belong to each of the validly described species and subspecies of this genus. Reference spectra for the strains were generated and used to complement a currently available database. The extended reference database was then used for identification based on the direct transfer and protein fingerprint of single colonies. -
The Louse Fly-Arsenophonus Arthropodicus Association
THE LOUSE FLY-ARSENOPHONUS ARTHROPODICUS ASSOCIATION: DEVELOPMENT OF A NEW MODEL SYSTEM FOR THE STUDY OF INSECT-BACTERIAL ENDOSYMBIOSES by Kari Lyn Smith A dissertation submitted to the faculty of The University of Utah in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology The University of Utah August 2012 Copyright © Kari Lyn Smith 2012 All Rights Reserved The University of Utah Graduate School STATEMENT OF DISSERTATION APPROVAL The dissertation of Kari Lyn Smith has been approved by the following supervisory committee members: Colin Dale Chair June 18, 2012 Date Approved Dale Clayton Member June 18, 2012 Date Approved Maria-Denise Dearing Member June 18, 2012 Date Approved Jon Seger Member June 18, 2012 Date Approved Robert Weiss Member June 18, 2012 Date Approved and by Neil Vickers Chair of the Department of __________________________Biology and by Charles A. Wight, Dean of The Graduate School. ABSTRACT There are many bacteria that associate with insects in a mutualistic manner and offer their hosts distinct fitness advantages, and thus have likely played an important role in shaping the ecology and evolution of insects. Therefore, there is much interest in understanding how these relationships are initiated and maintained and the molecular mechanisms involved in this process, as well as interest in developing symbionts as platforms for paratransgenesis to combat disease transmission by insect hosts. However, this research has been hampered by having only a limited number of systems to work with, due to the difficulties in isolating and modifying bacterial symbionts in the lab. In this dissertation, I present my work in developing a recently described insect-bacterial symbiosis, that of the louse fly, Pseudolynchia canariensis, and its bacterial symbiont, Candidatus Arsenophonus arthropodicus, into a new model system with which to investigate the mechanisms and evolution of symbiosis. -
Recent Advances and Perspectives in Nasonia Wasps
Disentangling a Holobiont – Recent Advances and Perspectives in Nasonia Wasps The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Dittmer, Jessica, Edward J. van Opstal, J. Dylan Shropshire, Seth R. Bordenstein, Gregory D. D. Hurst, and Robert M. Brucker. 2016. “Disentangling a Holobiont – Recent Advances and Perspectives in Nasonia Wasps.” Frontiers in Microbiology 7 (1): 1478. doi:10.3389/ fmicb.2016.01478. http://dx.doi.org/10.3389/fmicb.2016.01478. Published Version doi:10.3389/fmicb.2016.01478 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:29408381 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA fmicb-07-01478 September 21, 2016 Time: 14:13 # 1 REVIEW published: 23 September 2016 doi: 10.3389/fmicb.2016.01478 Disentangling a Holobiont – Recent Advances and Perspectives in Nasonia Wasps Jessica Dittmer1, Edward J. van Opstal2, J. Dylan Shropshire2, Seth R. Bordenstein2,3, Gregory D. D. Hurst4 and Robert M. Brucker1* 1 Rowland Institute at Harvard, Harvard University, Cambridge, MA, USA, 2 Department of Biological Sciences, Vanderbilt University, Nashville, TN, USA, 3 Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, TN, USA, 4 Institute of Integrative Biology, University of Liverpool, Liverpool, UK The parasitoid wasp genus Nasonia (Hymenoptera: Chalcidoidea) is a well-established model organism for insect development, evolutionary genetics, speciation, and symbiosis. -
Erwinia Chrysanthemi the Facts
Erwinia chrysanthemi (Dickeya spp.) The Facts Compiled for the British Potato Council by; Dr John Elphinstone, Central Science Laboratory Dr Ian Toth, Scottish Crop Research Institute Erwinia chrysanthemi (Dickeya spp.) – The Facts Contents Executive Summary 1. Introduction 2. The pathogen 3. Symptoms • Distinction from symptoms caused by P. atrosepticum and P. carotovorum • Distinction from other diseases 4. Geographical distribution • Presence in GB • Europe • Overseas 5. Biology, survival and dissemination of the pathogen • Factors influencing disease development • Dissemination • Survival 6. Assessment of Risk and Economic Loss • Quarantine status • Potential GB economic impact • Economic impact to overseas markets 7. Control • Statutory (certification) • On farm • Specific approaches and control measures in other countries • Best practice guide 8. Diagnostic methods 9. Knowledge gaps 10. Threats, Opportunities and Recommendations 11. References 12. Glossary of terms 2 © British Potato Council 2007 Erwinia chrysanthemi (Dickeya spp.) – The Facts Executive Summary The pathogen Erwinia chrysanthemi (Echr) is a complex of different bacteria now reclassified as species of Dickeya. While D. dadantii and D. zeae (formerly Echr biovar 3 or 8) are pathogens of potato in warmer countries, D. dianthicola (formerly Echr biovar 1 and 7) appears to be spreading on potatoes in Europe. The revised nomenclature of these pathogens has distinguished them from other soft rot erwiniae (including P. atrosepticum and P. carotovorum). Symptoms Symptoms of soft rot disease on potato tubers are similar whether caused by Dickeya or Pectobacterium spp. In the field, disease develops following movement of either pathogen from the stem base. Whereas P. atrosepticum typically causes blackleg symptoms under cool wet conditions, symptoms due to Dickeya spp. -
Assessing the Pathogenicity of Two Bacteria Isolated from the Entomopathogenic Nematode Heterorhabditis Indica Against Galleria Mellonella and Some Pest Insects
insects Article Assessing the Pathogenicity of Two Bacteria Isolated from the Entomopathogenic Nematode Heterorhabditis indica against Galleria mellonella and Some Pest Insects Rosalba Salgado-Morales 1,2 , Fernando Martínez-Ocampo 2 , Verónica Obregón-Barboza 2, Kathia Vilchis-Martínez 3, Alfredo Jiménez-Pérez 3 and Edgar Dantán-González 2,* 1 Doctorado en Ciencias, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, 62209 Cuernavaca, Morelos, Mexico; [email protected] 2 Laboratorio de Estudios Ecogenómicos, Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, 62209 Cuernavaca, Morelos, Mexico; [email protected] (F.M.-O.); [email protected] (V.O.-B.) 3 Centro de Desarrollo de Productos Bióticos, Instituto Politécnico Nacional, Calle Ceprobi No. 8, San Isidro, Yautepec, 62739 Morelos, Mexico; [email protected] (K.V.-M.); [email protected] (A.J.-P.) * Correspondence: [email protected]; Tel.: +52-777-329-7000 Received: 20 December 2018; Accepted: 15 March 2019; Published: 26 March 2019 Abstract: The entomopathogenic nematodes Heterorhabditis are parasites of insects and are associated with mutualist symbiosis enterobacteria of the genus Photorhabdus; these bacteria are lethal to their host insects. Heterorhabditis indica MOR03 was isolated from sugarcane soil in Morelos state, Mexico. The molecular identification of the nematode was confirmed using sequences of the ITS1-5.8S-ITS2 region and the D2/D3 expansion segment of the 28S rRNA gene. In addition, two bacteria HIM3 and NA04 strains were isolated from the entomopathogenic nematode. The genomes of both bacteria were sequenced and assembled de novo. -
Characterization and Synthesis of Selected Secondary Metabolites Produced by Xenorhabdus and Photorhabdus Spp
Characterization and Synthesis of Selected Secondary Metabolites produced by Xenorhabdus and Photorhabdus spp Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften vorgelegt dem Fachbereich der Biowissenschaften (15) der Johann Wolfgang von Goethe Universität, Frankfurt a. M. von Friederike Inga Nollmann geboren am 30. 11. 1985 in Stade D30 vom Fachbereich für Biowissenschaften (15) der Johann-Wolfgan-von-Goethe-Universität als Dissertation angenommen. Dekanin: Prof. Dr. Meike Piepenbring Gutachter: Prof. Dr. Helge B. Bode Jun. Prof. Dr. Martin Grininger Datum der Disputation: 3 4 There is no answer as big as the question, there is no victory as big as the lesson, you go on and you see where your detours will take you to, there is no power like understanding. Tina Dico To my friends and my family who were neglected now and then in the process of this work but nevertheless helped to make it happen. 5 6 Acknowledgement Anybody who has been seriously engaged in scientific work of any kind realizes that over the entrance to the gates of the temple of science are written the words: “Ye must have faith.” Max Planck With these words I would like to thank all the people who were involved in this work and had to restore my faith in sciences from time to time, namely Prof. Dr. Helge B. Bode, my mentor, who gave me the opportunity to work on a quite diverse topic which never stopped being challenging. I also appreciate it that he always had the confidence in me to make it click. Jun. Prof. Dr. Martin Grininger, my second reviewer, who was willing to survey this work without hesitation. -
Haemocoel Injection of Pira1b1 to Galleria Mellonella Larvae Leads To
www.nature.com/scientificreports OPEN Haemocoel injection of PirA1B1 to Galleria mellonella larvae leads to disruption of the haemocyte Received: 05 July 2016 Accepted: 22 September 2016 immune functions Published: 13 October 2016 Gongqing Wu1,2 & Yunhong Yi1 The bacterium Photorhabdus luminescens produces a number of insecticidal proteins to kill its larval prey. In this study, we cloned the gene coding for a binary toxin PirA1B1 and purified the recombinant protein using affinity chromatography combined with desalination technology. Furthermore, the cytotoxicity of the recombinant protein against the haemocytes of Galleria mellonella larvae was investigated. We found that the protein had haemocoel insecticidal activity against G. mellonella with an LD50 of 131.5 ng/larva. Intrahaemocoelic injection of PirA1B1 into G. mellonella resulted in significant decreases in haemocyte number and phagocytic ability. In in vitro experiments, PirA1B1 inhibited the spreading behaviour of the haemocytes of G. mellonella larvae and even caused haemocyte degeneration. Fluorescence microscope analysis and visualization of haemocyte F-actin stained with phalloidin-FITC showed that the PirA1B1 toxin disrupted the organization of the haemocyte cytoskeleton. Our results demonstrated that the PirA1B1 toxin disarmed the insect cellular immune system. Photorhabdus luminescens, a Gram-negative bacterium, resides as a symbiont in the gut of entomopathogenic nematodes (EPNs) of the genus Heterorhabditis1. Upon entering an insect host, EPNs release the symbiotic bacte- ria directly into the insect haemocoel. To infect its host and survive, bacteria must be capable of producing a wide range of proteins, including toxins2. To date, four primary classes of toxins are characterized in P. luminescens. The first class, toxin complexes (Tcs), shows both oral and injectable activity against the Colorado potato beetle3. -
Endosymbiont Diversity and Evolution Across Weevil Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/171181; this version posted August 1, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Endosymbiont diversity and evolution across weevil tree of life Guanyang Zhang1#, Patrick Browne1,2#, Geng Zhen1#, Andrew Johnston4, Hinsby Cadillo-Quiroz5, and Nico Franz1 1 School of Life Sciences, Arizona State University, Tempe, Arizona, USA 2 Department of Environmental Science, Aarhus University, 4000 Roskilde, Denmark # These authors contributed equally to this work ABSTRACT As early as the time of Paul Buchner, a pioneer of endosymbionts research, it was shown that weevils host diverse bacterial endosymbionts, probably only second to the hemipteran insects. To date, there is no taxonomically broad survey of endosymbionts in weevils, which preclude any systematic understanding of the diversity and evolution of endosymbionts in this large group of insects, which comprise nearly 7% of described diversity of all insects. We gathered the largest known taxonomic sample of weevils representing four families and 17 subfamilies to perform a study of weevil endosymbionts. We found that the diversity of endosymbionts is exceedingly high, with as many as 44 distinct kinds of endosymbionts detected. We recovered an ancient origin of association of Nardonella with weevils, dating back to 124 MYA. We found repeated losses of this endosymbionts, but also cophylogeny with weevils. We also investigated patterns of coexistence and coexclusion. INTRODUCTION Weevils (Insecta: Coleoptera: Curculionoidea) host diverse bacterial endosymbionts.