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Sex Is a Ubiquitous, Ancient, and Inherent Attribute of Eukaryotic Life
PAPER Sex is a ubiquitous, ancient, and inherent attribute of COLLOQUIUM eukaryotic life Dave Speijera,1, Julius Lukešb,c, and Marek Eliášd,1 aDepartment of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ, Amsterdam, The Netherlands; bInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, and Faculty of Sciences, University of South Bohemia, 370 05 Ceské Budejovice, Czech Republic; cCanadian Institute for Advanced Research, Toronto, ON, Canada M5G 1Z8; and dDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic Edited by John C. Avise, University of California, Irvine, CA, and approved April 8, 2015 (received for review February 14, 2015) Sexual reproduction and clonality in eukaryotes are mostly Sex in Eukaryotic Microorganisms: More Voyeurs Needed seen as exclusive, the latter being rather exceptional. This view Whereas absence of sex is considered as something scandalous for might be biased by focusing almost exclusively on metazoans. a zoologist, scientists studying protists, which represent the ma- We analyze and discuss reproduction in the context of extant jority of extant eukaryotic diversity (2), are much more ready to eukaryotic diversity, paying special attention to protists. We accept that a particular eukaryotic group has not shown any evi- present results of phylogenetically extended searches for ho- dence of sexual processes. Although sex is very well documented mologs of two proteins functioning in cell and nuclear fusion, in many protist groups, and members of some taxa, such as ciliates respectively (HAP2 and GEX1), providing indirect evidence for (Alveolata), diatoms (Stramenopiles), or green algae (Chlor- these processes in several eukaryotic lineages where sex has oplastida), even serve as models to study various aspects of sex- – not been observed yet. -
Superorganisms of the Protist Kingdom: a New Level of Biological Organization
Foundations of Science https://doi.org/10.1007/s10699-020-09688-8 Superorganisms of the Protist Kingdom: A New Level of Biological Organization Łukasz Lamża1 © The Author(s) 2020 Abstract The concept of superorganism has a mixed reputation in biology—for some it is a conveni- ent way of discussing supra-organismal levels of organization, and for others, little more than a poetic metaphor. Here, I show that a considerable step forward in the understand- ing of superorganisms results from a thorough review of the supra-organismal levels of organization now known to exist among the “unicellular” protists. Limiting the discussion to protists has enormous advantages: their bodies are very well studied and relatively sim- ple (as compared to humans or termites, two standard examples in most discussions about superorganisms), and they exhibit an enormous diversity of anatomies and lifestyles. This allows for unprecedented resolution in describing forms of supra-organismal organiza- tion. Here, four criteria are used to diferentiate loose, incidental associations of hosts with their microbiota from “actual” superorganisms: (1) obligatory character, (2) specifc spatial localization of microbiota, (3) presence of attachment structures and (4) signs of co-evolu- tion in phylogenetic analyses. Three groups—that have never before been described in the philosophical literature—merit special attention: Symbiontida (also called Postgaardea), Oxymonadida and Parabasalia. Specifcally, it is argued that in certain cases—for Bihos- pites bacati and Calkinsia aureus (symbiontids), Streblomastix strix (an oxymonad), Joe- nia annectens and Mixotricha paradoxa (parabasalids) and Kentrophoros (a ciliate)—it is fully appropriate to describe the whole protist-microbiota assocation as a single organism (“superorganism”) and its elements as “tissues” or, arguably, even “organs”. -
Molecular Identification and Evolution of Protozoa Belonging to the Parabasalia Group and the Genus Blastocystis
UNIVERSITAR DEGLI STUDI DI SASSARI SCUOLA DI DOTTORATO IN SCIENZE BIOMOLECOLARI E BIOTECNOLOGICHE (Intenational PhD School in Biomolecular and Biotechnological Sciences) Indirizzo: Microbiologia molecolare e clinica Molecular identification and evolution of protozoa belonging to the Parabasalia group and the genus Blastocystis Direttore della scuola: Prof. Masala Bruno Relatore: Prof. Pier Luigi Fiori Correlatore: Dott. Eric Viscogliosi Tesi di Dottorato : Dionigia Meloni XXIV CICLO Nome e cognome: Dionigia Meloni Titolo della tesi : Molecular identification and evolution of protozoa belonging to the Parabasalia group and the genus Blastocystis Tesi di dottorato in scienze Biomolecolari e biotecnologiche. Indirizzo: Microbiologia molecolare e clinica Universit degli studi di Sassari UNIVERSITAR DEGLI STUDI DI SASSARI SCUOLA DI DOTTORATO IN SCIENZE BIOMOLECOLARI E BIOTECNOLOGICHE (Intenational PhD School in Biomolecular and Biotechnological Sciences) Indirizzo: Microbiologia molecolare e clinica Molecular identification and evolution of protozoa belonging to the Parabasalia group and the genus Blastocystis Direttore della scuola: Prof. Masala Bruno Relatore: Prof. Pier Luigi Fiori Correlatore: Dott. Eric Viscogliosi Tesi di Dottorato : Dionigia Meloni XXIV CICLO Nome e cognome: Dionigia Meloni Titolo della tesi : Molecular identification and evolution of protozoa belonging to the Parabasalia group and the genus Blastocystis Tesi di dottorato in scienze Biomolecolari e biotecnologiche. Indirizzo: Microbiologia molecolare e clinica Universit degli studi di Sassari Abstract My thesis was conducted on the study of two groups of protozoa: the Parabasalia and Blastocystis . The first part of my work was focused on the identification, pathogenicity, and phylogeny of parabasalids. We showed that Pentatrichomonas hominis is a possible zoonotic species with a significant potential of transmission by the waterborne route and could be the aetiological agent of gastrointestinal troubles in children. -
Secondary Absence of Mitochondria in Giardia Lamblia and Trichomonas
Proc. Natl. Acad. Sci. USA Vol. 95, pp. 6860–6865, June 1998 Evolution Secondary absence of mitochondria in Giardia lamblia and Trichomonas vaginalis revealed by valyl-tRNA synthetase phylogeny (amitochondriate protistsydiplomonadsyparabasalia) TETSUO HASHIMOTO*†‡,LIDYA B. SA´NCHEZ†,TETSUROU SHIRAKURA*, MIKLO´S MULLER¨ †, AND MASAMI HASEGAWA* *The Institute of Statistical Mathematics, 4–6-7 Minami-Azabu, Minato-ku, Tokyo 106, Japan; and †The Rockefeller University, New York, NY 10021 Communicated by William Trager, The Rockefeller University, New York, NY, March 27, 1998 (received for review December 29, 1997) ABSTRACT Nuclear-coded valyl-tRNA synthetase evolutionary origins of the amitochondriate condition. Before (ValRS) of eukaryotes is regarded of mitochondrial origin. any molecular phylogenetic data became available, cytological Complete ValRS sequences obtained by us from two amito- considerations led to the proposal by Cavalier-Smith that chondriate protists, the diplomonad, Giardia lamblia and the diplomonads, parabasalids, and microsporidia could be prim- parabasalid, Trichomonas vaginalis were of the eukaryotic itively amitochondriate (15, 16), and to the erection of the type, strongly suggesting an identical history of ValRS in all taxon Archezoa for these organisms. These three amitochond- eukaryotes studied so far. The findings indicate that riate lineages represented the first branches on phylogenetic diplomonads are secondarily amitochondriate and give fur- trees based on rRNA (17, 18) and some protein sequences (19). ther evidence for such conclusion reached recently concerning This observation was regarded as compelling evidence for an parabasalids. Together with similar findings on other amito- early separation of these groups from the main eukaryotic chondriate groups (microsporidia and entamoebids), this lineage, preceding the acquisition of mitochondria (20). -
23.3 Groups of Protists
Chapter 23 | Protists 639 cysts that are a protective, resting stage. Depending on habitat of the species, the cysts may be particularly resistant to temperature extremes, desiccation, or low pH. This strategy allows certain protists to “wait out” stressors until their environment becomes more favorable for survival or until they are carried (such as by wind, water, or transport on a larger organism) to a different environment, because cysts exhibit virtually no cellular metabolism. Protist life cycles range from simple to extremely elaborate. Certain parasitic protists have complicated life cycles and must infect different host species at different developmental stages to complete their life cycle. Some protists are unicellular in the haploid form and multicellular in the diploid form, a strategy employed by animals. Other protists have multicellular stages in both haploid and diploid forms, a strategy called alternation of generations, analogous to that used by plants. Habitats Nearly all protists exist in some type of aquatic environment, including freshwater and marine environments, damp soil, and even snow. Several protist species are parasites that infect animals or plants. A few protist species live on dead organisms or their wastes, and contribute to their decay. 23.3 | Groups of Protists By the end of this section, you will be able to do the following: • Describe representative protist organisms from each of the six presently recognized supergroups of eukaryotes • Identify the evolutionary relationships of plants, animals, and fungi within the six presently recognized supergroups of eukaryotes • Identify defining features of protists in each of the six supergroups of eukaryotes. In the span of several decades, the Kingdom Protista has been disassembled because sequence analyses have revealed new genetic (and therefore evolutionary) relationships among these eukaryotes. -
The Amoeboid Parabasalid Flagellate Gigantomonas Herculeaof
Acta Protozool. (2005) 44: 189 - 199 The Amoeboid Parabasalid Flagellate Gigantomonas herculea of the African Termite Hodotermes mossambicus Reinvestigated Using Immunological and Ultrastructural Techniques Guy BRUGEROLLE Biologie des Protistes, UMR 6023, CNRS and Université Blaise Pascal de Clermont-Ferrand, Aubière Cedex, France Summary. The amoeboid form of Gigantomonas herculea (Dogiel 1916, Kirby 1946), a symbiotic flagellate of the grass-eating subterranean termite Hodotermes mossambicus from East Africa, is observed by light, immunofluorescence and transmission electron microscopy. Amoeboid cells display a hyaline margin and a central granular area containing the nucleus, the internalized flagellar apparatus, and organelles such as Golgi bodies, hydrogenosomes, and food vacuoles with bacteria or wood particles. Immunofluorescence microscopy using monoclonal antibodies raised against Trichomonas vaginalis cytoskeleton, such as the anti-tubulin IG10, reveals the three long anteriorly-directed flagella, and the axostyle folded into the cytoplasm. A second antibody, 4E5, decorates the conspicuous crescent-shaped structure or cresta bordered by the adhering recurrent flagellum. Transmission electron micrographs show a microfibrillar network in the cytoplasmic margin and internal bundles of microfilaments similar to those of lobose amoebae that are indicative of cytoplasmic streaming. They also confirm the internalization of the flagella. The arrangement of basal bodies and fibre appendages, and the axostyle composed of a rolled sheet of microtubules are very close to that of the devescovinids Foaina and Devescovina. The very large microfibrillar cresta supporting an enlarged recurrent flagellum resembles that of Macrotrichomonas. The parabasal apparatus attached to the basal bodies is small in comparison to the cell size; this is probably related to the presence of many Golgi bodies supported by a striated fibre that are spread throughout the central cytoplasm in a similar way to Placojoenia and Mixotricha. -
New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/403329; this version posted August 30, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. New phylogenomic analysis of the enigmatic phylum Telonemia further resolves the eukaryote tree of life Jürgen F. H. Strassert1, Mahwash Jamy1, Alexander P. Mylnikov2, Denis V. Tikhonenkov2, Fabien Burki1,* 1Department of Organismal Biology, Program in Systematic Biology, Uppsala University, Uppsala, Sweden 2Institute for Biology of Inland Waters, Russian Academy of Sciences, Borok, Yaroslavl Region, Russia *Corresponding author: E-mail: [email protected] Keywords: TSAR, Telonemia, phylogenomics, eukaryotes, tree of life, protists bioRxiv preprint doi: https://doi.org/10.1101/403329; this version posted August 30, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract The broad-scale tree of eukaryotes is constantly improving, but the evolutionary origin of several major groups remains unknown. Resolving the phylogenetic position of these ‘orphan’ groups is important, especially those that originated early in evolution, because they represent missing evolutionary links between established groups. Telonemia is one such orphan taxon for which little is known. The group is composed of molecularly diverse biflagellated protists, often prevalent although not abundant in aquatic environments. -
Species-Specific Escape of Plasmodium Sporozoites From
Orfano et al. Malar J (2016) 15:394 DOI 10.1186/s12936-016-1451-y Malaria Journal RESEARCH Open Access Species‑specific escape of Plasmodium sporozoites from oocysts of avian, rodent, and human malarial parasites Alessandra S. Orfano1, Rafael Nacif‑Pimenta1, Ana P. M. Duarte1,2, Luis M. Villegas1, Nilton B. Rodrigues1, Luciana C. Pinto1, Keillen M. M. Campos2, Yudi T. Pinilla2, Bárbara Chaves1,2, Maria G. V. Barbosa Guerra2, Wuelton M. Monteiro2, Ryan C. Smith4,5, Alvaro Molina‑Cruz6, Marcus V. G. Lacerda2,3, Nágila F. C. Secundino1, Marcelo Jacobs‑Lorena5, Carolina Barillas‑Mury6 and Paulo F. P. Pimenta1,2* Abstract Background: Malaria is transmitted when an infected mosquito delivers Plasmodium sporozoites into a vertebrate host. There are many species of Plasmodium and, in general, the infection is host-specific. For example, Plasmodium gallinaceum is an avian parasite, while Plasmodium berghei infects mice. These two parasites have been extensively used as experimental models of malaria transmission. Plasmodium falciparum and Plasmodium vivax are the most important agents of human malaria, a life-threatening disease of global importance. To complete their life cycle, Plasmodium parasites must traverse the mosquito midgut and form an oocyst that will divide continuously. Mature oocysts release thousands of sporozoites into the mosquito haemolymph that must reach the salivary gland to infect a new vertebrate host. The current understanding of the biology of oocyst formation and sporozoite release is mostly based on experimental infections with P. berghei, and the conclusions are generalized to other Plasmodium species that infect humans without further morphological analyses. Results: Here, it is described the microanatomy of sporozoite escape from oocysts of four Plasmodium species: the two laboratory models, P. -
An Endophytic Fungus, Gibberella Moniliformis from Lawsonia Inermis L. Produces Lawsone, an Orange-Red Pigment
Antonie van Leeuwenhoek DOI 10.1007/s10482-017-0858-y ORIGINAL PAPER An endophytic fungus, Gibberella moniliformis from Lawsonia inermis L. produces lawsone, an orange-red pigment Hatnagar Sarang . Pijakala Rajani . Madhugiri Mallaiah Vasanthakumari . Patel Mohana Kumara . Ramamoorthy Siva . Gudasalamani Ravikanth . R. Uma Shaanker Received: 8 December 2016 / Accepted: 9 March 2017 Ó Springer International Publishing Switzerland 2017 Abstract Lawsone (2-hydroxy-1, 4-napthoquinone), tissue. This is a first report of lawsone being produced by also known as hennotannic acid, is an orange red dye an endophytic fungus, independent of the host tissue. used as a popular skin and hair colorant. The dye is The study opens up interesting questions on the possible produced in the leaves of Lawsonia inermis L, often biosynthetic pathway through which lawsone is pro- referred to as the ‘‘henna’’ tree. In this study, we report duced by the fungus. the production of lawsone by an endophytic fungus, Gibberella moniliformis isolated from the leaf tissues of Keywords Endophytic fungus Á Lawsonia inermis Á Lawsonia inermis. The fungus produced the orange-red Lawsone Á Gibberella moniliformis Á Orange red dye dye in potato dextrose agar and broth, independent of the host tissue. Presence of lawsone was confirmed spec- trometrically using HPLC and ESI–MS/MS analysis. The fragmentation pattern of lawsone was identical to Introduction both standard lawsone and that extracted from plant Endophytes, both fungi and bacteria, inhabit living tissues of plants without causing any apparent symp- H. Sarang Á P. Rajani Á M. M. Vasanthakumari Á toms (Bandara et al. 2006; Khanam and Chandra & R. -
Plasmodium Asexual Growth and Sexual Development in the Haematopoietic Niche of the Host
REVIEWS Plasmodium asexual growth and sexual development in the haematopoietic niche of the host Kannan Venugopal 1, Franziska Hentzschel1, Gediminas Valkiūnas2 and Matthias Marti 1* Abstract | Plasmodium spp. parasites are the causative agents of malaria in humans and animals, and they are exceptionally diverse in their morphology and life cycles. They grow and develop in a wide range of host environments, both within blood- feeding mosquitoes, their definitive hosts, and in vertebrates, which are intermediate hosts. This diversity is testament to their exceptional adaptability and poses a major challenge for developing effective strategies to reduce the disease burden and transmission. Following one asexual amplification cycle in the liver, parasites reach high burdens by rounds of asexual replication within red blood cells. A few of these blood- stage parasites make a developmental switch into the sexual stage (or gametocyte), which is essential for transmission. The bone marrow, in particular the haematopoietic niche (in rodents, also the spleen), is a major site of parasite growth and sexual development. This Review focuses on our current understanding of blood-stage parasite development and vascular and tissue sequestration, which is responsible for disease symptoms and complications, and when involving the bone marrow, provides a niche for asexual replication and gametocyte development. Understanding these processes provides an opportunity for novel therapies and interventions. Gametogenesis Malaria is one of the major life- threatening infectious Malaria parasites have a complex life cycle marked Maturation of male and female diseases in humans and is particularly prevalent in trop- by successive rounds of asexual replication across gametes. ical and subtropical low- income regions of the world. -
Phylogenomic Analyses Support the Monophyly of Excavata and Resolve Relationships Among Eukaryotic ‘‘Supergroups’’
Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic ‘‘supergroups’’ Vladimir Hampla,b,c, Laura Huga, Jessica W. Leigha, Joel B. Dacksd,e, B. Franz Langf, Alastair G. B. Simpsonb, and Andrew J. Rogera,1 aDepartment of Biochemistry and Molecular Biology, Dalhousie University, Halifax, NS, Canada B3H 1X5; bDepartment of Biology, Dalhousie University, Halifax, NS, Canada B3H 4J1; cDepartment of Parasitology, Faculty of Science, Charles University, 128 44 Prague, Czech Republic; dDepartment of Pathology, University of Cambridge, Cambridge CB2 1QP, United Kingdom; eDepartment of Cell Biology, University of Alberta, Edmonton, AB, Canada T6G 2H7; and fDepartement de Biochimie, Universite´de Montre´al, Montre´al, QC, Canada H3T 1J4 Edited by Jeffrey D. Palmer, Indiana University, Bloomington, IN, and approved January 22, 2009 (received for review August 12, 2008) Nearly all of eukaryotic diversity has been classified into 6 strong support for an incorrect phylogeny (16, 19, 24). Some recent suprakingdom-level groups (supergroups) based on molecular and analyses employ objective data filtering approaches that isolate and morphological/cell-biological evidence; these are Opisthokonta, remove the sites or taxa that contribute most to these systematic Amoebozoa, Archaeplastida, Rhizaria, Chromalveolata, and Exca- errors (19, 24). vata. However, molecular phylogeny has not provided clear evi- The prevailing model of eukaryotic phylogeny posits 6 major dence that either Chromalveolata or Excavata is monophyletic, nor supergroups (25–28): Opisthokonta, Amoebozoa, Archaeplastida, has it resolved the relationships among the supergroups. To Rhizaria, Chromalveolata, and Excavata. With some caveats, solid establish the affinities of Excavata, which contains parasites of molecular phylogenetic evidence supports the monophyly of each of global importance and organisms regarded previously as primitive Rhizaria, Archaeplastida, Opisthokonta, and Amoebozoa (16, 18, eukaryotes, we conducted a phylogenomic analysis of a dataset of 29–34). -
Ultrastructural Differentiation of Toxoplasma Gondii Schizonts (Types B to E) and Gamonts in the Intestines of Cats Fed Bradyzoites
International Journal for Parasitology 35 (2005) 193–206 www.parasitology-online.com Ultrastructural differentiation of Toxoplasma gondii schizonts (types B to E) and gamonts in the intestines of cats fed bradyzoites C.A. Speera,b, J.P. Dubeyc,* aDepartment of Forestry, Wildlife and Fisheries, Agricultural Experiment Station, Institute of Agriculture, The University of Tennessee, Knoxville, TN 37920, USA bCenter for Bison and Wildlife Health, Department of Veterinary Molecular Biology, Montana State University, Bozeman, MT 59717, USA cUS Department of Agriculture, Agricultural Research Service, Animal and Natural Resources Institute, Animal Parasitic Diseases Laboratory, BARC-East, Building 1001, Beltsville, MD 20705-2350, USA Received 2 September 2004; received in revised form 19 October 2004; accepted 3 November 2004 Abstract The ultrastructural characterisitics of four types of Toxoplasma gondii schizonts (types B, C, D and E) and their merozoites, microgamonts and macrogamonts were compared in cats killed at days 1, 2, 4 and 6 after feeding tissues cysts from the brains of mice. Schizonts, merozoites and gamonts contained most of the ultrastructural features characteristic of the phylum Apicomplexa. All four types of schizonts developed within enterocytes or intraepithelial lymphocytes. Occasionally, type B and C schizonts developed within enterocytes that were displaced beneath the epithelium into the lamina propria. Type D and E schizonts and gamonts developed exclusively in the epithelium. Tachyzoites occurred exclusively within the lamina propria. Type B schizonts formed merozoites by endodyogeny, whereas types C to E developed by endopolygeny. The parasitophorous vacuoles surrounding type B and C schizonts consisted of a single membrane, whereas those surrounding types D and E schizonts were comprised of two to four electron-dense membranes.