Phialemonium Curvatum INFECTION AFTER BONE MARROW TRANSPLANTATION
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Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Monograph on Dematiaceous Fungi
Monograph On Dematiaceous fungi A guide for description of dematiaceous fungi fungi of medical importance, diseases caused by them, diagnosis and treatment By Mohamed Refai and Heidy Abo El-Yazid Department of Microbiology, Faculty of Veterinary Medicine, Cairo University 2014 1 Preface The first time I saw cultures of dematiaceous fungi was in the laboratory of Prof. Seeliger in Bonn, 1962, when I attended a practical course on moulds for one week. Then I handled myself several cultures of black fungi, as contaminants in Mycology Laboratory of Prof. Rieth, 1963-1964, in Hamburg. When I visited Prof. DE Varies in Baarn, 1963. I was fascinated by the tremendous number of moulds in the Centraalbureau voor Schimmelcultures, Baarn, Netherlands. On the other hand, I was proud, that El-Sheikh Mahgoub, a Colleague from Sundan, wrote an internationally well-known book on mycetoma. I have never seen cases of dematiaceous fungal infections in Egypt, therefore, I was very happy, when I saw the collection of mycetoma cases reported in Egypt by the eminent Egyptian Mycologist, Prof. Dr Mohamed Taha, Zagazig University. To all these prominent mycologists I dedicate this monograph. Prof. Dr. Mohamed Refai, 1.5.2014 Heinz Seeliger Heinz Rieth Gerard de Vries, El-Sheikh Mahgoub Mohamed Taha 2 Contents 1. Introduction 4 2. 30. The genus Rhinocladiella 83 2. Description of dematiaceous 6 2. 31. The genus Scedosporium 86 fungi 2. 1. The genus Alternaria 6 2. 32. The genus Scytalidium 89 2.2. The genus Aurobasidium 11 2.33. The genus Stachybotrys 91 2.3. The genus Bipolaris 16 2. -
Culture Inventory
For queries, contact the SFA leader: John Dunbar - [email protected] Fungal collection Putative ID Count Ascomycota Incertae sedis 4 Ascomycota Incertae sedis 3 Pseudogymnoascus 1 Basidiomycota Incertae sedis 1 Basidiomycota Incertae sedis 1 Capnodiales 29 Cladosporium 27 Mycosphaerella 1 Penidiella 1 Chaetothyriales 2 Exophiala 2 Coniochaetales 75 Coniochaeta 56 Lecythophora 19 Diaporthales 1 Prosthecium sp 1 Dothideales 16 Aureobasidium 16 Dothideomycetes incertae sedis 3 Dothideomycetes incertae sedis 3 Entylomatales 1 Entyloma 1 Eurotiales 393 Arthrinium 2 Aspergillus 172 Eladia 2 Emericella 5 Eurotiales 2 Neosartorya 1 Paecilomyces 13 Penicillium 176 Talaromyces 16 Thermomyces 4 Exobasidiomycetes incertae sedis 7 Tilletiopsis 7 Filobasidiales 53 Cryptococcus 53 Fungi incertae sedis 13 Fungi incertae sedis 12 Veroneae 1 Glomerellales 1 Glomerella 1 Helotiales 34 Geomyces 32 Helotiales 1 Phialocephala 1 Hypocreales 338 Acremonium 20 Bionectria 15 Cosmospora 1 Cylindrocarpon 2 Fusarium 45 Gibberella 1 Hypocrea 12 Ilyonectria 13 Lecanicillium 5 Myrothecium 9 Nectria 1 Pochonia 29 Purpureocillium 3 Sporothrix 1 Stachybotrys 3 Stanjemonium 2 Tolypocladium 1 Tolypocladium 2 Trichocladium 2 Trichoderma 171 Incertae sedis 20 Oidiodendron 20 Mortierellales 97 Massarineae 2 Mortierella 92 Mortierellales 3 Mortiererallales 2 Mortierella 2 Mucorales 109 Absidia 4 Backusella 1 Gongronella 1 Mucor 25 RhiZopus 13 Umbelopsis 60 Zygorhynchus 5 Myrmecridium 2 Myrmecridium 2 Onygenales 4 Auxarthron 3 Myceliophthora 1 Pezizales 2 PeZiZales 1 TerfeZia 1 -
Phialemonium Obovatum Keratitis After Penetration Injury of the Cornea
Korean J Ophthalmol 2012;26(6):465-468 http://dx.doi.org/10.3341/kjo.2012.26.6.465 pISSN: 1011-8942 eISSN: 2092-9382 Case Report Phialemonium obovatum Keratitis after Penetration Injury of the Cornea Kwon Ho Hong1, Nam Hee Ryoo2, Sung Dong Chang1 1Department of Ophthalmology, Keimyung University School of Medicine, Daegu, Korea 2Department of Laboratory Medicine, Keimyung University School of Medicine, Daegu, Korea Phialemonium keratitis is a very rare case and we encountered a case of keratitis caused by Phialemonium obo- vatum (P. obovatum) after penetrating injury to the cornea. This is the first case report in the existing literature. A 54-year-old male was referred to us after a penetration injury, and prompt primary closure was performed. Two weeks after surgery, an epithelial defect and stromal melting were observed near the laceration site. P. obo- vatum was identified, and then identified again on repeated cultures. Subsequently, Natacin was administered every two hours. Amniotic membrane transplantation was performed due to a persistent epithelial defect and impending corneal perforation. Three weeks after amniotic membrane transplantation, the epithelial defect had completely healed, but the cornea had turned opaque. Six months after amniotic membrane transplantation, visual acuity was light perception only, and corneal thinning and diffuse corneal opacification remained opaque. Six months after amniotic membrane transplantation, visual acuity was light perception only, and corneal thin- ning and diffuse corneal opacification remained. Key Words: Corneal ulcer, Fungi, Phialemonium obovatum Members of the Phialemonium genus are dematiaceous Case Report fungi, which are known as causative fungi for opportunis- tic infection in immunocompromised hosts. -
Taxonomic Re-Examination of Nine Rosellinia Types (Ascomycota, Xylariales) Stored in the Saccardo Mycological Collection
microorganisms Article Taxonomic Re-Examination of Nine Rosellinia Types (Ascomycota, Xylariales) Stored in the Saccardo Mycological Collection Niccolò Forin 1,* , Alfredo Vizzini 2, Federico Fainelli 1, Enrico Ercole 3 and Barbara Baldan 1,4,* 1 Botanical Garden, University of Padova, Via Orto Botanico, 15, 35123 Padova, Italy; [email protected] 2 Institute for Sustainable Plant Protection (IPSP-SS Torino), C.N.R., Viale P.A. Mattioli, 25, 10125 Torino, Italy; [email protected] 3 Department of Life Sciences and Systems Biology, University of Torino, Viale P.A. Mattioli, 25, 10125 Torino, Italy; [email protected] 4 Department of Biology, University of Padova, Via Ugo Bassi, 58b, 35131 Padova, Italy * Correspondence: [email protected] (N.F.); [email protected] (B.B.) Abstract: In a recent monograph on the genus Rosellinia, type specimens worldwide were revised and re-classified using a morphological approach. Among them, some came from Pier Andrea Saccardo’s fungarium stored in the Herbarium of the Padova Botanical Garden. In this work, we taxonomically re-examine via a morphological and molecular approach nine different Rosellinia sensu Saccardo types. ITS1 and/or ITS2 sequences were successfully obtained applying Illumina MiSeq technology and phylogenetic analyses were carried out in order to elucidate their current taxonomic position. Only the Citation: Forin, N.; Vizzini, A.; ITS1 sequence was recovered for Rosellinia areolata, while for R. geophila, only the ITS2 sequence was Fainelli, F.; Ercole, E.; Baldan, B. recovered. We proposed here new combinations for Rosellinia chordicola, R. geophila and R. horridula, Taxonomic Re-Examination of Nine R. ambigua R. -
Colonization of Vines by Petri Disease Fungi, Susceptibility of Rootstocks To
PLANT PATHOLOGY / SCIENTIFIC ARTICLE DOI: 10.1590/1808-1657000882017 Colonization of vines by Petri disease fungi, susceptibility of rootstocks to Phaeomoniella chlamydospora and their disinfection Colonização de videiras pelos fungos da doença de Petri, suscetibilidade de porta-enxertos ao fungo Phaeomoniella chlamydospora e sua desinfecção Ana Beatriz Monteiro Ferreira1, Luís Garrigós Leite1, José Luiz Hernandes2, Ricardo Harakava3, Carlos Roberto Padovani4, César Junior Bueno1* ABSTRACT: Petri disease is complex, attacks young RESUMO: A doença de Petri é complexa, ataca plantas jovens vine plants and it is difficult to be controlled. The fungus de videira e é difícil de ser controlada. O fungo Phaeomoniella Phaeomoniella chlamydospora (Phc) has been identified as chlamydospora é o principal agente causal dessa doença. Os obje- the main causative agent of this disease. This study aimed to tivos deste estudo foram: avaliar o local prevalente dos fungos da evaluate the prevalent colonization of the Petri disease fungi doença de Petri, em diferentes partes de plantas de videira; ava- in different portions of vine plants; to assess the susceptibility liar a suscetibilidade de porta-enxertos de videira para o fungo of grapevine rootstocks to the fungus P. chlamydospora; to P. chlamydospora; avaliar o efeito da solarização e da biofumiga- assess the effect of solarization and biofumigation, followed by ção seguido de tratamento com água quente sobre a desinfecção hot-water treatment (HWT), on the disinfection of cuttings de estacas do porta-enxerto IAC 766 infectadas com o fungo of the rootstock IAC 766 infected with P. chlamydospora, and P. chlamydospora; avaliar o efeito da solarização e da biofumigação assess the effect of solarization and biofumigation, followed by seguido de tratamento com água quente sobre o enraizamento de HWT, on the rooting of cuttings of the rootstock IAC 766. -
Supplement Hoenigl TLID 2021 Global Guideline for the Diagnosis
Supplementary appendix This appendix formed part of the original submission and has been peer reviewed. We post it as supplied by the authors. Supplement to: Hoenigl M, Salmanton-García J, Walsh TJ, et al. Global guideline for the diagnosis and management of rare mould infections: an initiative of the European Confederation of Medical Mycology in cooperation with the International Society for Human and Animal Mycology and the American Society for Microbiology. Lancet Infect Dis 2021; published online Feb 16. https://doi.org/10.1016/S1473-3099(20)30784-2. 1 Global guideline for the diagnosis and management of rare 2 mold infections: An initiative of the ECMM in cooperation 3 with ISHAM and ASM* 4 5 Authors 6 Martin Hoenigl (FECMM)1,2,3,54,55#, Jon Salmanton-García4,5,30,55, Thomas J. Walsh (FECMM)6, Marcio 7 Nucci (FECMM)7, Chin Fen Neoh (FECMM)8,9, Jeffrey D. Jenks2,3,10, Michaela Lackner (FECMM)11,55, Ro- 8 sanne Sprute4,5,55, Abdullah MS Al-Hatmi (FECMM)12, Matteo Bassetti13, Fabianne Carlesse 9 (FECMM)14,15, Tomas Freiberger16, Philipp Koehler (FECMM)4,5,17,30,55, Thomas Lehrnbecher18, Anil Ku- 10 mar (FECMM)19, Juergen Prattes (FECMM)1,55, Malcolm Richardson (FECMM)20,21,55,, Sanjay Revankar 11 (FECMM)22, Monica A. Slavin23,24, Jannik Stemler4,5,55, Birgit Spiess25, Saad J. Taj-Aldeen26, Adilia Warris 12 (FECMM)27, Patrick C.Y. Woo (FECMM)28, Jo-Anne H. Young29, Kerstin Albus4,30,55, Dorothee Arenz4,30,55, 13 Valentina Arsic-Arsenijevic (FECMM)31,54, Jean-Philippe Bouchara32,33, Terrence Rohan Chinniah34, Anu- 14 radha Chowdhary (FECMM)35, G Sybren de Hoog (FECMM)36, George Dimopoulos (FECMM)37, Rafael F. -
The Protean Acremonium. A. Sclerotigenum/Egyptiacum: Revision, Food Contaminant, and Human Disease
microorganisms Article The Protean Acremonium. A. sclerotigenum/egyptiacum: Revision, Food Contaminant, and Human Disease Richard C. Summerbell 1,2,*, Cecile Gueidan 3, Josep Guarro 4, Akif Eskalen 5, Pedro W. Crous 6, Aditya K. Gupta 7,8, Josepa Gené 4, Jose F. Cano-Lira 4, Arien van Iperen 6, Mieke Starink 6 and James A. Scott 2 ID 1 Sporometrics, 219 Dufferin St. Ste. 20C, Toronto, ON M6K 1Y9 Canada 2 Dalla Lana School of Public Health, University of Toronto, Toronto, ON M5T 3M7, Canada; [email protected] 3 Australian National Herbarium, National Research Collections Australia, CSIRO-NCMI, Canberra, ACT 2601, Australia; [email protected] 4 Unitat de Micologia, Facultat de Medicina i Ciencies de la Salut and IISPV, Universitat Rovira i Virgili, Reus, 43201 Tarragona, Spain; [email protected] (J.G.); [email protected] (J.G.); [email protected] (J.F.C.-L.) 5 Department of Plant Pathology, University of California Davis, Davis, CA 95616, USA; [email protected] 6 Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands; [email protected] (P.W.C.); [email protected] (A.v.I.); [email protected] (M.S.) 7 Division of Dermatology, Department of Medicine, University of Toronto, Toronto, ON M5G 2C4, Canada; [email protected] 8 Mediprobe Research Inc., London, ON N5X 2P1, Canada * Correspondence: [email protected]; Tel.: +1-416-516-1660 Received: 2 June 2018; Accepted: 13 August 2018; Published: 16 August 2018 Abstract: Acremonium is known to be regularly isolated from food and also to be a cause of human disease. -
First Report of Six Sordariomycetes Fungi Isolated from Plant Litter in Freshwater Ecosystems of Korea
The Korean Journal of Mycology www.kjmycology.or.kr RESEARCH ARTICLE First report of six Sordariomycetes fungi isolated from plant litter in freshwater ecosystems of Korea * Jaeduk Goh , Hye Yeon Mun, Yu-Jeong Jeon, Namil Chung, Young-Hwan Park, Sangkyu Park, Hyejin Hwang and Wonsu Cheon Fungi Research Team, Nakdonggang National Institute of Biological Resources, Sangju 37242, Korea * Corresponding author: [email protected] ABSTRACT Freshwater ecosystems provide a complex environment for microorganisms. In this study, we isolated diverse fungal strains from plant litter in freshwaters. These strains were identified using molecular phylogenetic analyses of rDNA and/or other gene sequences (TUB, GAPDH, and EF1). In addition, we examined their morphological characteristics by microscopy and cultural characteristics on several media. We identified six previously unrecorded Sordariomycetes species in Korea, i.e., Colletotrichum godetiae, Discosia rubi, Robillarda sessilis, Monochaetia dimorphospora, Idriella lunata, and Phialemoniopsis endophytica. Of these, D. rubi and M. dimorphospora exhibited high extracellular amylase, lipase, and protease activities, suggesting that these fungal isolates might play an important role as decomposers in freshwater ecosystems. Plant litter could thus be a good source for isolating and investigating previously undocumented fungal species in freshwater environments. Keywords: Freshwater, Plant litter, Sordariomycetes OPEN ACCESS pISSN : 0253-651X eISSN : 2383-5249 Kor. J. Mycol. 2020 June, 48(2): 103-116 INTRODUCTION https://doi.org/10.4489/KJM.20200012 Freshwater ecosystems encompass several habitat types, providing a diverse environment for microorganisms. Plant litter, such as fallen leaves and decaying wood, are typical habitats for several freshwater fungi. Freshwater fungi, which represent a poly-phylogenetic group, are taxonomically diverse Received: April 13, 2020 Revised: June 13, 2020 organisms colonizing the substrate in aquatic or semi-aquatic environments [1-2]. -
SCEDOSPORIUM, ACREMONIUM, PHIALEMONIUM, LECYTHOPHORA Y PAECILOMYCES Haybrig Mercedes Perdomo Ziems
CARACTERIZACIÓN FENOTÍPICA Y MOLECULAR DE HONGOS FILAMENTOSOS OPORTUNISTAS: SCEDOSPORIUM, ACREMONIUM, PHIALEMONIUM, LECYTHOPHORA Y PAECILOMYCES Haybrig Mercedes Perdomo Ziems Dipòsit Legal: T. 1717-2011 ADVERTIMENT. La consulta d’aquesta tesi queda condicionada a l’acceptació de les següents condicions d'ús: La difusió d’aquesta tesi per mitjà del servei TDX (www.tesisenxarxa.net) ha estat autoritzada pels titulars dels drets de propietat intel·lectual únicament per a usos privats emmarcats en activitats d’investigació i docència. No s’autoritza la seva reproducció amb finalitats de lucre ni la seva difusió i posada a disposició des d’un lloc aliè al servei TDX. No s’autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant al resum de presentació de la tesi com als seus continguts. En la utilització o cita de parts de la tesi és obligat indicar el nom de la persona autora. ADVERTENCIA. La consulta de esta tesis queda condicionada a la aceptación de las siguientes condiciones de uso: La difusión de esta tesis por medio del servicio TDR (www.tesisenred.net) ha sido autorizada por los titulares de los derechos de propiedad intelectual únicamente para usos privados enmarcados en actividades de investigación y docencia. No se autoriza su reproducción con finalidades de lucro ni su difusión y puesta a disposición desde un sitio ajeno al servicio TDR. No se autoriza la presentación de su contenido en una ventana o marco ajeno a TDR (framing). Esta reserva de derechos afecta tanto al resumen de presentación de la tesis como a sus contenidos. -
Opportunistic Water-Borne Human Pathogenic Filamentous Fungi Unreported from Food
microorganisms Review Opportunistic Water-Borne Human Pathogenic Filamentous Fungi Unreported from Food Monika Novak Babiˇc 1,* ID , Jerneja Zupanˇciˇc 1, João Brandão 2 ID and Nina Gunde-Cimerman 1 1 Biotechnical Faculty, University of Ljubljana, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia; [email protected] (J.Z.); [email protected] (N.G.-C.) 2 Department of Environmental Health, National Institute of Health Doutor Ricardo Jorge, Av. Padre Cruz, 1649-016 Lisboa, Portugal; [email protected] * Correspondence: [email protected]; Tel.: +386-1-320-3405 Received: 14 June 2018; Accepted: 2 August 2018; Published: 3 August 2018 Abstract: Clean drinking water and sanitation are fundamental human rights recognized by the United Nations (UN) General Assembly and the Human Rights Council in 2010 (Resolution 64/292). In modern societies, water is not related only to drinking, it is also widely used for personal and home hygiene, and leisure. Ongoing human population and subsequent environmental stressors challenge the current standards on safe drinking and recreational water, requiring regular updating. Also, a changing Earth and its increasingly frequent extreme weather events and climatic changes underpin the necessity to adjust regulation to a risk-based approach. Although fungi were never introduced to water quality regulations, the incidence of fungal infections worldwide is growing, and changes in antimicrobial resistance patterns are taking place. The presence of fungi in different types of water has been thoroughly investigated during the past 30 years only in Europe, and more than 400 different species were reported from ground-, surface-, and tap-water. -
A Review of Fungi in Drinking Water and the Implications for Human Health
Defra Reference: WD 0906 A REVIEW OF FUNGI IN DRINKING WATER AND THE IMPLICATIONS FOR HUMAN HEALTH Final Report April 2011 In association with: Contact BIO Intelligence Service Pierre Sonigo - Arianna De Toni - Kate Reilly + 33 (0) 1 53 90 11 80 [email protected] [email protected] [email protected] This page is left intentionally blank Defra Final Report 2 Review of fungi in drinking water April 2011 Contents Executive summary 5 1. Introduction 9 2. Methodology 11 3. Fungal taxa in treated drinking water 13 3.1. Fungi entering the drinking water distribution system ..............................................................13 3.2. Identification and characterisation of fungi in the drinking water distribution system .......17 4. Fungal ecology in water systems 25 4.1. Abiotic and anthropogenic factors influencing ecology of fungal taxa in water systems ....25 4.2. Biotic factors influencing ecology of fungal taxa in water systems ..........................................34 4.3. Summary of biotic and abiotic factors influencing fungal ecology ...........................................38 5. Impacts on human health 41 5.1. Exposure pathways............................................................................................................................41 5.2. Direct health impacts of fungal infections ....................................................................................43 5.3. Factors that could influence some indirect health impacts .......................................................54