South African Journal of Botany 2004, 70(3): 407–416 Copyright © NISC Pty Ltd Printed in South Africa — All rights reserved SOUTH AFRICAN JOURNAL OF BOTANY ISSN 0254–6299 A molecular systematic investigation of Cymopterus and its allies (Apiaceae) based on phylogenetic analyses of nuclear (ITS) and plastid (rps16 intron) DNA sequences F-J Sun and SR Downie* Department of Plant Biology, University of Illinois, Urbana 61801, United States of America * Corresponding author, email:
[email protected] Received 5 September 2003, accepted in revised form 7 November 2003 Considerable controversy exists with regard to the maximum likelihood methods. For those trees exhibit- proper delimitation of Cymopterus (Apiaceae subfamily ing the greatest resolution, the results revealed that the Apioideae) and its relationship to the other perennial perennial, endemic apioid genera of North America endemic umbellifers of western North America. (north of Mexico) comprise a weakly supported mono- Previous molecular systematic studies using nuclear phyletic group, with Angelica constituting its sister line- (rDNA ITS) and, for subsets of taxa, plastid (rps16 intron age. Cymopterus is confirmed as highly polyphyletic. and trnF-trnL-trnT) DNA sequences have revealed that The rps16 intron yielded substantially fewer parsimony the genus Cymopterus is polyphyletic, with its species informative characters than those of the ITS region and inextricably linked with those of Aletes, Lomatium, when analysed, separately or in combination, with ITS Musineon, Oreoxis, Pseudocymopterus, Pteryxia, data, resulted in trees of poor resolution. Only one pre- Tauschia, and several other genera of the region. viously identified species group of Cymopterus is sup- Herein, in an effort to increase resolution of relation- ported as monophyletic; this group coincides with sec- ships, we procured rps16 intron sequence data from 74 tion Phellopterus, and is recognised by its showy, accessions of Cymopterus and its allies so that ITS and basally connate bractlets.