Chapter-I CROP DESCRIPTION 1.1 Origin of Rice 1.1.1 Oryza Sativa, It Is
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Ecological Differentiation and Incipient Speciation in the Fungal Pathogen Causing
bioRxiv preprint doi: https://doi.org/10.1101/2020.06.02.129296; this version posted June 3, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 ECOLOGICAL DIFFERENTIATION AND INCIPIENT SPECIATION IN THE FUNGAL PATHOGEN CAUSING 2 RICE BLAST 3 Maud THIERRY1,2,3, Joëlle MILAZZO1,2, Henri ADREIT1,2, Sébastien RAVEL1,2,4, Sonia BORRON1, Violaine 4 SELLA3, Renaud IOOS3, Elisabeth FOURNIER1, Didier THARREAU1,2,5, Pierre GLADIEUX1,5 5 1UMR BGPI, Université de Montpellier, INRAE, CIRAD, Institut Agro, F-34398 Montpellier, France 6 2 CIRAD, UMR BGPI, F-34398 Montpellier, France. 7 3ANSES Plant Health Laboratory, Mycology Unit, Domaine de Pixérécourt, Bâtiment E, F-54220 Malzéville, France 8 4 South Green Bioinformatics Platform, Alliance Bioversity-international CIAT, CIRAD, INRAE, IRD, Montpellier, 9 France. 10 [email protected]; [email protected] 11 12 ABSTRACT 13 Natural variation in plant pathogens has an impact on food security and ecosystem health. The rice 14 blast fungus Pyricularia oryzae, which limits rice production in all rice-growing areas, is structured into 15 multiple lineages. Diversification and the maintenance of multiple rice blast lineages have been 16 proposed to be due to separation in different areas and differential adaptation to rice subspecies. 17 However, the precise world distribution of rice blast populations, and the factors controlling their 18 presence and maintenance in the same geographic areas, remain largely unknown. -
STATUS PAPER on RICE Directorate of Rice Developement
STATUS PAPER ON RICE Directorate of Rice Developement Govt. of India 250A, Patliputra Colony, Patna (Bihar) d` f"k vk;qÙk Hkkjr ljdkj Dr. J.S. Sandhu d`f"k ea=kky; Tel / Fax : 2338 3549 (d` f"k ,oa lgdkfjrk foHkkx) Mob: 9582898978 d` f"k Hkou] ubZ fnYyh & 110001 E-mail : [email protected] Agriculture Commissioner Government of India Ministry of Agriculture (Department of Agriculture & Cooperation) Krishi Bhawan, New Delhi-110 001 FOREWORD Rice is a staple food of majority of the people of India. In many states of the contry, supply of rice has generally kept pace with the increase in demand, largely due to cultiva- tion of high yielding varieties/hybrids, expansion of irrigation potential, use of chemical fertilizers and adoption of improved production technologies. The efforts need to continue to increase production to feed increasing population with adoption of improved package of practices through implementing various Crop Development Schemes/Programme in the country. The Directorate of Rice Development, Patna has brought out publication “Rice - A Status Paper” and pooled the scattered information related to the rice. The publication deals with general scenario of cropping/growing season, crop production, pests manage- ment, varieties/hybrids and different eco-systems, statistical data, post-harvest technology and export of rice. In addition to this, various schemes/programmes are being implemented by the Government of India in different rice growing states. I express my appreciation to Shri Sanjay Lohiya, Joint Secretary (Crops), Dr. D.P. Malik, Additional Commissioner (Crops), Dr. M.C. Diwakar, Director, Directorate of Rice Development, Patna and his team effort in bringing out this valuable publication. -
An Overview of Rice Productive Cultivation and Variety in India
International Research Journal of Engineering and Technology (IRJET) e-ISSN: 2395-0056 Volume: 07 Issue: 12 | Dec 2020 www.irjet.net p-ISSN: 2395-0072 An Overview of Rice Productive Cultivation and Variety in India Shalini Chanda1, Shramana Sarkar1, Sourini Sen1, Swarnendu Ghosh1, Saikat Mazumder1 1Department of Food Technology, Guru Nanak Institute of Technology, Kolkata, West Bengal, India ----------------------------------------------------------------------***--------------------------------------------------------------------- Abstract - In many nations, rice is one of the most dominant displays a rice specialty that meet local tastes and food crops and an integral part of the world economy. A substantial habits [6]. part of the world's population consumes rice and the trade of rice plays a major role in countries' trade. The origin of rice 2. ORIGIN OF RICE and its development is very widespread. There are a lot of rice varieties that are grown all over the world. Across the There are many theories and much debate regarding the countries a demand for multiple varieties of rice has been origin of rice. Around 3,000 years ago, in Africa, the now less created, rice trade has grown significantly in many countries. popular Oryza glaberrima rice was separately cultivated [7]. During the food shortage, the importance of rice has been Southeast Asian archaeologists propose that rice farming recognized multiple times. The whole study focuses on the started somewhere along the Yangzte River in south-central global rice production scenarios, trade and other economic China, and spread from there towards south and northeast significance. Throughout all these years, rice production in into Korea and Japan. Archaeologists working in India, India and all over Asia has increased substantially. -
Traditional Rice Varieties of Tamil Nadu : a Source Book
TRADITIONAL RICE VARIETIES OF TAMIL NADU - A SOURCE BOOK THE CENTRE FOR INDIAN KNOWLEDGE Since 1995, Centre for Indian Knowledge Namma Nellu is an initiative of Centre for Indian SYSTEMS Systems has been working towards Knowledge Systems to conserve indigenous enhancing livelihood security of small rice varieties in Tamil Nadu. The objectives of (CIKS) and marginal farmers in Tamil Nadu. Namma Nellu initiative are planting and replanting Our programmes in the areas of organic the varieties year after year in two locations for agriculture, biodiversity conservation and conservation purposes, conducting researches has been involved in work relating to various Vrkshayurveda (the ancient Indian plant to understand the characteristics of traditional aspects of Traditional Rice Varieties (TRV) since science) have helped farmers go organic in the formation of the organization in 1995. The varieties, initiating dialogues on the importance a sustainable, effective and profitable way. work started initially with the realization that of Agro biodiversity on society and ecology these varieties were important for sustainable Drawing from and building on indigenous and multiplying seeds to offer for large scale agriculture practices since they provide a range knowledge and practices, we develop production of traditional rice varieties. of seeds which are suited to various ecosystems, farming solutions relevant to the present soil types and in many cases have the resistance day context. Our activities include research, to various pests, diseases, drought and floods. Several individuals, associations, communities, During the last 25 years the work has progressed extension work and promoting farmer educational institutions, families and organisations extensively as well as deeply and it currently producer organizations. -
Loss of Function at RAE2, a Previously Unidentified EPFL, Is Required for Awnlessness in Cultivated Asian Rice
Loss of function at RAE2, a previously unidentified EPFL, is required for awnlessness in cultivated Asian rice Kanako Bessho-Ueharaa,1, Diane R. Wangb,1, Tomoyuki Furutaa, Anzu Minamia, Keisuke Nagaia, Rico Gamuyaoa, Kenji Asanoa, Rosalyn B. Angeles-Shima, Yoshihiro Shimizua, Madoka Ayanoa, Norio Komedaa, Kazuyuki Doic, Kotaro Miurad, Yosuke Todae, Toshinori Kinoshitae, Satohiro Okudae, Tetsuya Higashiyamae, Mika Nomotof, Yasuomi Tadaf, Hidefumi Shinoharaf, Yoshikatsu Matsubayashif, Anthony Greenbergb, Jianzhong Wug, Hideshi Yasuih, Atsushi Yoshimurah, Hitoshi Moric,2, Susan R. McCouchb,2, and Motoyuki Ashikaria,2 aBioscience and Biotechnology Center, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8601, Japan; bSection of Plant Breeding and Genetics, School of Integrated Plant Sciences, Cornell University, Ithaca, NY 14853-1901; cGraduate School of Agriculture, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8601, Japan; dFaculty of Biotechnology, Fukui Prefectural University, 4-1-1 Eiheiji-Town, Fukui 910-1195, Japan; eInstitute of Transformative Bio-Molecules, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8602, Japan; fDivision of Biological Science, Graduate School of Science, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8602, Japan; gNational Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan; and hFaculty of Agriculture, Kyushu University, 6-10-1 Hakozaki, Higashi-ku, Fukuoka 812-8581, Japan Edited by Maarten Koornneef, Max Planck Institute for Plant Breeding Research, Cologne, Germany, and approved June 22, 2016 (received for review March 24, 2016) Domestication of crops based on artificial selection has contributed important for habitat expansion and survival of wild rice. Under numerous beneficial traits for agriculture. Wild characteristics such domestication, the awnless phenotype has been selected to facilitate as red pericarp and seed shattering were lost in both Asian (Oryza planting, harvesting, and storage of seeds (17). -
2015 Top 100 Founders Whether It’S in Plant Breeding Or Business, Policy Or Marketing, Sales Or Education, Leadership in the Seed Industry Takes Many Forms
FOUNDERS SERIES PART 6 OF 6 2015 Top 100 Founders Whether it’s in plant breeding or business, policy or marketing, sales or education, leadership in the seed industry takes many forms. Meet the most transformational men and women in the seed industry during the past 100 years. From all across the globe, they shape your world. THESE ARE THE individuals his first batch of okra seeds research stations and farmers’ fields of Mexico that Borlaug who have provided leadership to his neighbors, his com- developed successive generations of wheat varieties with broad during trying times, insight to pany contracts with more and stable disease resistance, broad adaptation to growing con- complex issues, and a com- than 100,000 growers. Since ditions across many degrees of latitude and with exceedingly mitment to something larger then, seed distribution in India high yield potential. These new wheat varieties and improved than self. has grown 40-fold. In 1998, crop management practices transformed agricultural produc- The 100 founders of the he received the World Food tion in Mexico during the 1940s and 1950s and later in Asia and seed industry that we’ve Prize award and invested that Latin America, sparking the Green Revolution. Because of his chosen to represent the money into research pro- achievements and efforts to prevent hunger, famine and misery dramatic changes during the grams for hybrid rice varieties. around the world, it is said that Borlaug has saved more lives past century have all left a than any other person who has ever lived. tremendous mark — be it in Henry Beachell plant breeding, technology, Creator of IR8 Rice Kent Bradford business or the policy arena — Today, most of the rice Launched the Seed Biotechnology Center that impacts the seed indus- grown in the world comes Through workshops and courses, the try. -
Final Report
9th -11th November, 2017 India Expo Mart (IEML) Greater Noida, U.P. (Delhi – NCR), India biofach-india.com FINAL REPORT International patron: Co-organizer: Organizer: Final Report Exhibition name: BIOFACH INDIA together with INDIA ORGANIC 2017 Venue: India Expo Mart Limited (IEML) Greater Noida, U.P., Delhi-NCR, India Date: November 9 - 11, 2017 Organizer: Co-Organizer: International Patron: Contacts for exhibition: Ms. Priya Sharma Project Director T: +91 (0) 11 4716 8830 Email: [email protected] Ms. Tanya Bhardwaj Project Manager T: +91 (0) 11 4716 8826 Email: [email protected] Save the date for BIOFACH INDIA 2018: October 25 - 27, 2018 Pragati Maidan, New Delhi, India To book exhibition space in 2018, please contact one of the representatives mentioned above. www.biofach-india.com Page 2 of 15 Final Report FACTS & FIGURES Gross Space 4000 sqm Exhibitors 184 State Pavilions 17 Indian States participated at the Show Andhra Pradesh Arunachal Pradesh Assam, Bihar Chattisgarh Karnataka Kerala Maharashtra Manipur Meghalaya Nagaland Punjab Sikkim Telangana Tripura Uttarakhand Uttar Pradesh Congress Participants / Congress Participants – 2479 Visitors Trade Visitors ( including farmer groups) 7175 www.biofach-india.com Page 3 of 15 Final Report AN OUTSTANDING EDITION OF BIOFACH INDIA 2017! The ninth edition of India’s largest and most focused event for country, India won the bid to host the event this year against organic products concluded successfully. The fair provided the stiff competition from Russia, China and Brazil. The Organic perfect business platform to organic stakeholders, retailers, World Congress once again played a critical role in strength- exporters / importers, Govt. -
Grain and Feed Annual
Required Report: Required - Public Distribution Date: March 31,2020 Report Number: IN2020-0012 Report Name: Grain and Feed Annual Country: India Post: New Delhi Report Category: Grain and Feed Prepared By: Dr. Santosh K. Singh Approved By: Jeanne Bailey Report Highlights: India is heading for a fourth consecutive record wheat harvest, with marketing year (MY) 2020/21 (April/March) production forecast at 105 million metric tons (MMT). MY 2020/21 rice production is forecast at a near record 117 MMT with average yields. Back-to-back record harvests and government procurements have inflated MY 2019/20 wheat and rice stocks to more than three times desired levels. The Government of India (GOI) is likely to release additional wheat and rice at subsidized prices in CY 2020 and 2021 to reduce stocks to manageable levels. Indian wheat remains uncompetitive in the international market, but exports in MY 2020/21 are forecast higher at 1 MMT on expected higher sales to neighboring countries. Rice exports in MY 2020/21 are forecast to recover to 12 MMT on higher exportable supplies. MY 2020/21 coarse grain consumption is forecast at 45.8 MMT stagnant over last year on weak demand from the poultry sector, which has been hit by fake news that poultry products can transmit Covid-19. THIS REPORT CONTAINS ASSESSMENTS OF COMMODITY AND TRADE ISSUES MADE BY USDA STAFF AND NOT NECESSARILY STATEMENTS OF OFFICIAL U.S. GOVERNMENT POLICY WHEAT Table 1. India: Commodity, Wheat, PSD (Area in Thousand Hectares, Quantity in Thousand Metric Tons, Yield in MT/Hectare) Wheat 2018/2019 2019/2020 2020/2021 Market Begin Year Apr 2018 Apr 2019 Apr 2020 India USDA Official New Post USDA Official New Post USDA Official New Post Area Harvested 29651 29651 29319 29319 0 31050 Beginning Stocks 13230 13230 16992 16992 0 24000 Production 99870 99870 103600 103600 0 105000 MY Imports 17 26 20 25 0 25 TY Imports 18 26 20 25 0 25 TY Imp. -
Operator Name Category Country Scope 1 Scope 2 Scope 3 Product Category Address Primary Contact E-Mail Status Plot No
Enlisted certified operations have been certified to OneCert International Organic Standards-Equivalent to EC 834/2007. This list includes certified operations as of February 12, 2020 Please contact [email protected] for information on decertified, suspended, surrendered and revoked operations. Operator Name Category Country Scope 1 Scope 2 Scope 3 Product Category Address Primary Contact E-mail Status Plot No. 3312/18, Phase IV Chhatral GIDC, Taluka-Kalol Amrutva Fine Foods LLP D India Handling Oils & Pastes Hitesh Chotalia [email protected] Certified Gandhinagar, Gujarat 382729 Doi Thong Community Enterprise for Coffee, fruits, nuts, spices A, D Thailand Crop Handling 100 M. 7 T. Doi Kaew, Chomthong District, Chiang Mai 50160 Phanuwat Mongkhon [email protected] Development (Coffee Project) & herbs Certified Doi Thong Community Enterprise for A Thailand Crop Herbs, fruits & vegetables 100 M. 7 T. Doi Kaew, Chomthong District, Chiang Mai 50160 [email protected] Development (Longan Project) Phanuwat Mongkhon Certified Doi Thong Community Enterprise for 101/2 M. 7 T. Doi Kaew, Chomthong District, Chiang Mai A Thailand Crop Rice, Fruits, Herbs, Wheat [email protected] Development (Rice Project) 50160 Phanuwat Mongkhon Certified Spices, Oils & Herbal Kulayan Natural Herbal Pvt Ltd A, D, A Nepal Crop Handling Wild Harvest Mechinagar-10, Kakarbhitta, Bhadrapur, Jhapa District Mukesh Basnet [email protected], Certified Extracts Essential Oils & Herbal [email protected], Khaptar Aroma Industries D, A Nepal Handling Wild Harvest Namua Ga Bi Sa, Godawai Ward No. 1 Lalitpur Certified Extracts Samir Dhangel [email protected], House no-12 A, Arvind Vihar, Baghmugaliya,Bhopal,Madhya Vandana Organic Trade OPC Pvt. -
Final Report V1.2 Q01108 12 NOV 07
Rice LabChip Analysis - Q01108 Adaptation Of DNA Analysis Techniques for the Analysis of Basmati Rice Varieties, Adulterant Varieties and other Fragrant Rice Varieties for use on the Agilent 2100 BioAnalyzer Final Technical Report October 2007 12 June 2006 – 20 June 2007 Katherine Steele and Rob Ogden Page 1 of 27 Table of Contents 1. Executive Summary 3 2. Glossary 5 3. Aims and Objectives of the Investigation 6 3.1 Why is enforcement needed for basmati rice? 6 3.2 Existing basmati rice tests with SSR markers 7 3.3 Alternative marker systems for rice 7 3.4 Aims and Objectives 8 4. Experimental Procedures 9 4.1. Sourcing of standard varieties and DNA extraction 9 4.2. Testing INDEL markers in different rice genotypes 10 4.3. Testing Rim2/Hipa and ISSR markers in different rice genotypes 10 4.4. Optimizing multiplex PCRs for INDELS 10 4.5. Developing a SOP for variety analysis of bulk extracts using the LabChip system 10 4.6. Optimizing existing SSRs for LabChip analysis 11 4.7. Evaluating INDEL markers for quantitative testing 11 5. Results and Discussion 12 5.1 Results with INDEL markers 12 5.2 Results with Rim2/Hipa and ISSR markers 12 5.3 Database of markers 14 5.4 Development of INDEL markers for variety testing 16 5.5 Quantitative analysis 16 5.6 Problems encountered when adapting the tests for the Agilent Bioanalyzer 17 6. Acknowledgements 17 7. References 18 Appendices 20 Page 2 of 27 1. Executive Summary Aromatic basmati rice is sold at a premium price on the world market. -
Genetic and Molecular Analysis of Utility of Sd1 Alleles in Rice Breeding
Breeding Science 57 : 53–58 (2007) Genetic and Molecular Analysis of Utility of sd1 Alleles in Rice Breeding Kenji Asano1), Tomonori Takashi2), Kotaro Miura1), Qian Qian3), Hidemi Kitano1), Makoto Matsuoka1) and Motoyuki Ashikari*1) 1) Bioscience and Biotechnology Center, Nagoya University, Furo-cho, Chikusa, Nagoya, Aichi 464-8601, Japan 2) Honda Research Institute Japan Co., Ltd., 2-1-4 Kazusa-Kamatari, Kisarazu, Chiba 292-0818, Japan 3) China National Rice Research Institute, Hangzhou, Zhejiang 310006, China The widespread adoption of the high-yielding semi-dwarf rice variety, IR8, led to the “green revolution” in Asia in the 1960s. The short stature of this variety is due to a loss-of-function of the SD1 gene that encodes a GA20 oxidase-2 (GA20ox-2) which catalyzes late steps of gibberellin biosynthesis. In this study, we inves- tigated how widely sd1 mutations have been employed in the generation of semi-dwarf varieties of rice. Ge- netic and molecular analyses revealed that the sd1 allele of IR8 has been used in the production of japonica varieties. Sequence analysis of the SD1 locus of 57 semi-dwarf varieties showed that at least 7 sd1 alleles have been used in the breeding of semi-dwarf rice varieties in China, USA and Japan. The utilization of such a high number of different alleles all controlling the same target trait highlights that mutations in GA20ox-2 induce an agronomically advantageous architecture in rice. Key Words: rice, semi-dwarf, sd1, IR8. Introduction (IRRI), contributed to the green revolution in Asia. IR8 was bred by crossing between a Taiwanese native semi-dwarf In the 1960s, the rapid expansion of the world popula- variety, Dee-geo-woo-gen (DGWG), which carries the semi- tion and dramatic decrease in cultivated lands raised concern dwarf 1 (sd1) gene, and an Indonesian good-taste variety, that food production would not meet the growing demand, Peta (Hargrove and Cabanilla 1979, Dalrymple 1986). -
Rice: Bioactive Compounds and Their Health Benefits
The Pharma Innovation Journal 2021; 10(5): 845-853 ISSN (E): 2277- 7695 ISSN (P): 2349-8242 NAAS Rating: 5.23 Rice: Bioactive compounds and their health benefits TPI 2021; 10(5): 845-853 © 2021 TPI www.thepharmajournal.com Arsha RS, Prasad Rasane and Jyoti Singh Received: 22-03-2021 Accepted: 24-04-2021 Abstract Arsha RS Rice is the primary source of calories in many developing countries, and about 60% of the world's Department of Food Technology population consumes rice as a staple food. Rice has high nutritional value such as carbohydrate, fat, fibre, and Nutrition, School of protein, vitamins as well as food energy, minerals profile and fatty acids. The processing steps of rice is Agriculture, Lovely Professional cleaning, parboiling, drying, dehusking, partial milling, grading, packing and storage. The pigmented rice University, Phagwara, Punjab, varieties are available with reddish, purple or even blackish colour. Various extraction methods are used India for extraction bioactive compounds from rice including traditional methods (like Soxhlet extraction Prasad Rasane method and maceration method) to modern methods ( like accelerated solvent extraction method (ASE), Department of Food Technology solid-phase extraction (SPE), pressurized liquid extraction (PLE), pressurized fluid extraction (PFE), and Nutrition, School of subcritical water extraction (SWE), subcritical fluid extraction (SFE), microwave-assisted extraction Agriculture, Lovely Professional (MAE), vortex-assisted extraction (VAE), ultrasound-assisted extraction (UAE))