Description of Two Deep-Water Copepods of the Genus
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First Molecular Data and Morphological Re-Description of Two
Journal of King Saud University – Science 33 (2021) 101290 Contents lists available at ScienceDirect Journal of King Saud University – Science journal homepage: www.sciencedirect.com Original article First molecular data and morphological re-description of two copepod species, Hatschekia sargi and Hatschekia leptoscari, as parasites on Parupeneus rubescens in the Arabian Gulf ⇑ Saleh Al-Quraishy a, , Mohamed A. Dkhil a,b, Nawal Al-Hoshani a, Wejdan Alhafidh a, Rewaida Abdel-Gaber a,c a Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia b Department of Zoology and Entomology, Faculty of Science, Helwan University, Cairo, Egypt c Zoology Department, Faculty of Science, Cairo University, Cairo, Egypt article info abstract Article history: Little information is available about the biodiversity of parasitic copepods in the Arabian Gulf. The pre- Received 6 September 2020 sent study aimed to provide new information about different parasitic copepods gathered from Revised 30 November 2020 Parupeneus rubescens caught in the Arabian Gulf (Saudi Arabia). Copepods collected from the infected fish Accepted 9 December 2020 were studied using light microscopy and scanning electron microscopy and then examined using stan- dard staining and measuring techniques. Phylogenetic analyses were conducted based on the partial 28S rRNA gene sequences from other copepod species retrieved from GenBank. Two copepod species, Keywords: Hatschekia sargi Brian, 1902 and Hatschekia leptoscari Yamaguti, 1939, were identified as naturally 28S rRNA gene infected the gills of fish. Here we present a phylogenetic analysis of the recovered copepod species to con- Arabian Gulf Hatschekiidae firm their taxonomic position in the Hatschekiidae family within Siphonostomatoida and suggest the Marine fish monophyletic origin this family. -
Order HARPACTICOIDA Manual Versión Española
Revista IDE@ - SEA, nº 91B (30-06-2015): 1–12. ISSN 2386-7183 1 Ibero Diversidad Entomológica @ccesible www.sea-entomologia.org/IDE@ Class: Maxillopoda: Copepoda Order HARPACTICOIDA Manual Versión española CLASS MAXILLOPODA: SUBCLASS COPEPODA: Order Harpacticoida Maria José Caramujo CE3C – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal. [email protected] 1. Brief definition of the group and main diagnosing characters The Harpacticoida is one of the orders of the subclass Copepoda, and includes mainly free-living epibenthic aquatic organisms, although many species have successfully exploited other habitats, including semi-terrestial habitats and have established symbiotic relationships with other metazoans. Harpacticoids have a size range between 0.2 and 2.5 mm and have a podoplean morphology. This morphology is char- acterized by a body formed by several articulated segments, metameres or somites that form two separate regions; the anterior prosome and the posterior urosome. The division between the urosome and prosome may be present as a constriction in the more cylindric shaped harpacticoid families (e.g. Ectinosomatidae) or may be very pronounced in other familes (e.g. Tisbidae). The adults retain the central eye of the larval stages, with the exception of some underground species that lack visual organs. The harpacticoids have shorter first antennae, and relatively wider urosome than the copepods from other orders. The basic body plan of harpacticoids is more adapted to life in the benthic environment than in the pelagic environment i.e. they are more vermiform in shape than other copepods. Harpacticoida is a very diverse group of copepods both in terms of morphological diversity and in the species-richness of some of the families. -
Traditional and Confocal Descriptions of a New Genus and Two New
A peer-reviewed open-access journal ZooKeys 766:Traditional 1–38 (2018) and confocal descriptions of a new genus and two new species of deep water... 1 doi: 10.3897/zookeys.766.23899 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Traditional and confocal descriptions of a new genus and two new species of deep water Cerviniinae Sars, 1903 from the Southern Atlantic and the Norwegian Sea: with a discussion on the use of digital media in taxonomy (Copepoda, Harpacticoida, Aegisthidae) Paulo H. C. Corgosinho1, Terue C. Kihara2, Nikolaos V. Schizas3, Alexandra Ostmann2, Pedro Martínez Arbizu2, Viatcheslav N. Ivanenko4 1 Department of General Biology, State University of Montes Claros (UNIMONTES), Campus Universitário Professor Darcy Ribeiro, 39401-089 Montes Claros (MG), Brazil 2 Senckenberg am Meer, Department of German Center for Marine Biodiversity Research, Südstrand 44, 26382 Wilhelmshaven, Germany 3 Department of Marine Sciences, University of Puerto Rico at Mayagüez, Call Box 9000, Mayagüez, PR 00681, USA 4 Department of Invertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, 119899 Moscow, Russia Corresponding author: Paulo H. C. Corgosinho ([email protected]) Academic editor: D. Defaye | Received 26 January 2018 | Accepted 24 April 2018 | Published 13 June 2018 http://zoobank.org/75C9A0E9-5A26-4CC3-97C7-1771B6A943D1 Citation: Corgosinho PHC, Kihara TC, Schizas NV, Ostmann A, Arbizu PM, Ivanenko VN (2018) Traditional and confocal descriptions of a new genus and two new species of deep water Cerviniinae Sars, 1903 from the Southern Atlantic and the Norwegian Sea: with a discussion on the use of digital media in taxonomy (Copepoda, Harpacticoida, Aegisthidae). -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology .......... -
Tesis Estructura Comunitaria De Copepodos .Pdf
Universidad de Concepción Dirección de Postgrado Facultad de Ciencias Naturales y Oceanográficas Programa de Magister en Ciencias mención Oceanografía Estructura comunitaria de copépodos pelágicos asociados a montes submarinos de la Dorsal Juan Fernández (32-34°S) en el Pacífico Sur Oriental Tesis para optar al grado de Magíster en Ciencias con mención en Oceanografía PAMELA ANDREA FIERRO GONZÁLEZ CONCEPCIÓN-CHILE 2019 Profesora Guía: Pamela Hidalgo Díaz Departamento de Oceanografía, Facultad de Ciencias Naturales y Oceanográficas Universidad de Concepción Profesor Co-guía: Rubén Escribano Departamento de Oceanografía, Facultad de Ciencias Naturales y Oceanográficas Universidad de Concepción La Tesis de “Magister en Ciencias con mención en Oceanografía” titulada “Estructura comunitaria de copépodos pelágicos asociados a montes submarinos de la Dorsal Juan Fernández (32-34°S) en el Pacífico sur oriental”, de la Srta. “PAMELA ANDREA FIERRO GONZÁLEZ” y realizada bajo la Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, ha sido aprobada por la siguiente Comisión de Evaluación: Dra. Pamela Hidalgo Díaz Profesora Guía Universidad de Concepción Dr. Rubén Escribano Profesor Co-Guía Universidad de Concepción Dr. Samuel Hormazábal Miembro de la Comisión Evaluadora Pontificia Universidad Católica de Valparaíso Dr. Fabián Tapia Director Programa de Magister en Oceanografía Universidad de Concepción ii A Juan Carlos y Sebastián iii AGRADECIMIENTOS Agradezco a quienes con su colaboración y apoyo hicieron posible el desarrollo y término de esta tesis. En primer lugar, agradezco a los miembros de mi comisión de tesis. A mi profesora guía, Dra. Pamela Hidalgo, por apoyarme y guiarme en este largo camino de formación académica, por su gran calidad humana, contención y apoyo personal. -
Fishery Circular
'^y'-'^.^y -^..;,^ :-<> ii^-A ^"^m^:: . .. i I ecnnicai Heport NMFS Circular Marine Flora and Fauna of the Northeastern United States. Copepoda: Harpacticoida Bruce C.Coull March 1977 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service NOAA TECHNICAL REPORTS National Marine Fisheries Service, Circulars The major respnnsibilities of the National Marine Fisheries Service (NMFS) are to monitor and assess the abundance and geographic distribution of fishery resources, to understand and predict fluctuationsin the quantity and distribution of these resources, and to establish levels for optimum use of the resources. NMFS is also charged with the development and implementation of policies for managing national fishing grounds, development and enforcement of domestic fisheries regulations, surveillance of foreign fishing off United States coastal waters, and the development and enforcement of international fishery agreements and policies. NMFS also assists the fishing industry through marketing service and economic analysis programs, and mortgage insurance and vessel construction subsidies. It collects, analyzes, and publishes statistics on various phases of the industry. The NOAA Technical Report NMFS Circular series continues a series that has been in existence since 1941. The Circulars are technical publications of general interest intended to aid conservation and management. Publications that review in considerable detail and at a high technical level certain broad areas of research appear in this series. Technical papers originating in economics studies and from management in- vestigations appear in the Circular series. NOAA Technical Report NMFS Circulars arc available free in limited numbers to governmental agencies, both Federal and State. They are also available in exchange for other scientific and technical publications in the marine sciences. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Ivanenko V.N. 2006. Copepoda (Introduction). In: D. DESBRYERES, M
Ivanenko V.N. 2006. Copepoda (Introduction). In: D. DESBRYERES, M. SEGONZAC & M. BRIGHT (Eds.) Handbook of Deep-Sea Hydrothermal Vent Fauna. Second edition. DENISIA, 18: 316-317 Ivanenko V.N. & Defaye D. 2006. Copepoda. In: D. DESBRYERES, M. SEGONZAC & M. BRIGHT (Eds.) Handbook of Deep-Sea Hydrothermal Vent Fauna. Second edition. DENISIA, 18: 318-355 Viatcheslav N. IVANENKO, Ph.D. Department of Invertebrate Zoology Biological Faculty, Moscow State University Leninskie Gory, 1-12 Moscow 119992, Russia http://www.nature.ok.ru/invertebrates/cv.html Handbook of Deep-Sea Hydrothermal Vent Fauna D. DESBRYÈRES, M. SEGONZAC & M. BRIGHT (Eds.) Denisia 18, 544 pages (27 x 21 cm) ISSN: 1608-8700; ISBN: 10 3-85474-154-5 or ISBN: 13 978-3-85474-154-1 Ordering via e-mail: [email protected] Price: 49 € (excl. shipping) The second extensively expanded edition of the "Handbook of Deep-Sea Hydrothermal Vent Fauna" gives on overview of our current knowledge on the animals living at hydrothermal vents. The discovery of hydrothermal vents and progresses made during almost 30 years are outlined. A brief introduction is given on hydrothermal vent meiofauna and parasites. Geographic maps and a table of mid-ocean ridges and back-arc basins with the major known hydrothermal vent fields, their location and depth range and the most prominent vent sites are provided. Higher taxa are presented individually with information on the current taxonomic and biogeographic status, the number of species described, recommendations for fixation, and schematic drawings, which aim to help non-specialists to identify the animals. 86 authors contributed with their expertise to create a comprehensive database on animals living at hydrothermal vents, which contains information on the morphology, biology, and geographic distribution of more than 500 currently described species belonging to one protist and 12 animal phyla. -
Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin
California State University, Monterey Bay Digital Commons @ CSUMB Capstone Projects and Master's Theses Capstone Projects and Master's Theses Summer 2020 Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin Kenji Jordi Soto California State University, Monterey Bay Follow this and additional works at: https://digitalcommons.csumb.edu/caps_thes_all Recommended Citation Soto, Kenji Jordi, "Hydrothermal Vent Periphery Invertebrate Community Habitat Preferences of the Lau Basin" (2020). Capstone Projects and Master's Theses. 892. https://digitalcommons.csumb.edu/caps_thes_all/892 This Master's Thesis (Open Access) is brought to you for free and open access by the Capstone Projects and Master's Theses at Digital Commons @ CSUMB. It has been accepted for inclusion in Capstone Projects and Master's Theses by an authorized administrator of Digital Commons @ CSUMB. For more information, please contact [email protected]. HYDROTEHRMAL VENT PERIPHERY INVERTEBRATE COMMUNITY HABITAT PREFERENCES OF THE LAU BASIN _______________ A Thesis Presented to the Faculty of Moss Landing Marine Laboratories California State University Monterey Bay _______________ In Partial Fulfillment of the Requirements for the Degree Master of Science in Marine Science _______________ by Kenji Jordi Soto Spring 2020 CALIFORNIA STATE UNIVERSITY MONTEREY BAY The Undersigned Faculty Committee Approves the Thesis of Kenji Jordi Soto: HYDROTHERMAL VENT PERIPHERY INVERTEBRATE COMMUNITY HABITAT PREFERENCES OF THE LAU BASIN _____________________________________________ -
Calibration of the Multi-Gene Metabarcoding Approach As an Efficient and Accurate Biomonitoring Tool
Calibration of the multi-gene metabarcoding approach as an efficient and accurate biomonitoring tool Guang Kun Zhang Department of Biology McGill University, Montréal April 2017 A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Master of Science © Guang Kun Zhang 2017 1 TABLE OF CONTENTS Abstract .................................................................................................................. 3 Résumé .................................................................................................................... 4 Acknowledgements ................................................................................................ 5 Contributions of Authors ...................................................................................... 6 General Introduction ............................................................................................. 7 References ..................................................................................................... 9 Manuscript: Towards accurate species detection: calibrating metabarcoding methods based on multiplexing multiple markers.................................................. 13 References ....................................................................................................32 Tables ...........................................................................................................41 Figures ........................................................................................................ -
Styracothoracidae (Copepoda: Harpacticoida), a New Family from the Philippine Deep Sea
JOURNAL OF CRUSTACEAN BIOLOGY, 13(4) 769-783, 1993 STYRACOTHORACIDAE (COPEPODA: HARPACTICOIDA), A NEW FAMILY FROM THE PHILIPPINE DEEP SEA Rony Huys AB S T R A C T A new family is proposedto accommodateStyracothorax gladiator, new genus,new species, collected from 2,050-m depth in the Philippine Sea. The Styracothoracidaeis placed in the Cervinioidea on account of the fused rostrum, the setation of the antennaryendopod, the reductionof the maxillularyexopod, and the uniramousfifth legs in at least the female. A suite of synapomorphies,including the subchelatemaxilliped, suggestsa sister-grouprelationship with the cave-dwellingRotundiclipeidae. The primitive featuresof the Styracothoracidaeand the phylogeneticrelationships of the cervinioid families are discussed. The present work arises from a study of tulocarid that is described in a separate ac- the bathyal and mainly abyssal harpacti- count (Huys et al., 1993). coids collected during the second leg of the MATERIALSAND METHODS French ESTASE Expedition in 1984. Co- pepods were collected on board the RV The holotypefemale was dissectedin lactic acid and Jean Charcot during its cruise off the Phil- the dissected partswere placed in lactophenolmount- west coast from Manila to ing medium. Preparationswere sealed with glyceel ippine Surabaya (Gurr?, BDH ChemicalsLtd., Poole, England). in Indonesia. All drawings have been preparedusing a camera The harpacticoid copepod fauna of Phil- lucidaon a Leitz Diaplaninterference microscope. The ippine deep waters has received relatively descriptive terminology is adopted from Huys and little attention, despite the fact that exten- Boxshall (1991). sive surveys have been carried out in the DESCRIPTIONS Philippine Trench during the Danish Gal- new athea Expedition and the various cruises of Styracothoracidae, family the Russian research vessel Vityaz (Belyaev, Diagnosis.--Body slightly depressed, pro- 1972). -
New Aegisthidae (Copepoda: Harpacticoida) from Western Pacific
~oolo,@cal~journalo/he Linnean Sorie& ('LOOO), 129: 1-71. M'ith 31 ligurcs doi:10.1006/~jls.lY9'3.01Y7.availahlc onlinc at http://w\\w.idraliI,ran..com on IoE New Aegisthidae (Copepoda: Harpacticoida) Erom western Pacific cold seeps- and hydrothermal vents WONCHOEL LEE AND ROW HUYS" Department d<oology, ?he Natural Histoly Museum, Cromwell Road, London SW7 5BD Receiiied October 1998; acrepted for publicatton April 1999 Hyperbenthic harpacticoid samples from Japanese hydrothcrmal vents in the Okinawa Trough and cold seep sites in Sagami Bay were examined and resulted in the discovery of four new species belonging to three new genera of Aegisthidac (Copcpoda: Harpacticoida). Females of Nudivorax todai gen. et sp. nov. possess a large area of flexible integument between the cephalosome and thc first pedigerous somite which is suggestive of a gorging feeding strategy. Main diagnostic characters separating the new genus from other Acgisthidae are provided by the unusually short caudal rami, the complete lack of intcgumcntal surface lamellae, and thc presence in the male of a linear array of pores along the rostra1 margin which appears to be sensory in function. Scabrantennayooi gen. et sp. nov. displays several similarities with Aegisthus aculeatus Giesbrecht, 189 1 but is highly distinctive in its male morphology which includes extremely atrophied mouthparts and a unique prehensile antenna. Jamstecia terazakii gen. et sp. nov. is only known from a singlc fcmale caught in the Okinawa Trough.Jamstecia gen. nov. is most closely related to Andromustax Conroy-Dalton & Huys, 1999 but can be distincguishcdon the basis of the elongate antennules, the antennary morphology, the ahscncc of lateral spinous processes on the cephalosome and swimming lcgs 2-4, and differenccs in the mandibular palp and armature of the maxilliped.