Vision of a Personal Genomics Future BOOKS & ARTS
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The Honorable Francis Collins the Honorable Anthony S. Fauci
The Honorable Francis Collins The Honorable Anthony S. Fauci Director Director National Institutes of Health National Institute of Allergy and Infectious Diseases Building 1 5601 Fishers Ln 9000 Rockville Pike Rockville, MD 20852 Bethesda, MD 20892 August 25, 2020 Dear Director Collins and Director Fauci, I want to first thank you for your tireless work to ensure that we win the fight against COVID-19. This insidious virus is not only a public health crisis, but also a crisis that is having devastating consequences on our economy. Due to the urgent nature of this pandemic, it is vitally important that we develop effective treatments and vaccines to minimize the virus’ impact and ultimately eradicate it. While I am encouraged about the progress of vaccine development for COVID-19, including the Moderna vaccine which has entered phase 3 trials, I am concerned that those living in underserved communities, especially communities of color, will not be able to easily participate in these trials. I strongly urge you to consider an additional site in Los Angeles closer to and more accessible for my demographically diverse constituents – representing populations that are desperately needed to participate in these trials. The COVID-19 crisis affects all of us, but it is the latest disease to infect and kill communities of color at higher rates than people in the rest of the population. When conducting clinical trials for treatments and vaccines for COVID-19, there needs to be an emphasis to ensure that those who are participating in the trials are racially diverse, so that there are not any disparities in terms of the effectiveness of the treatment. -
Attitudes Towards Personal Genomics Among Older Swiss Adults: an Exploratory Study
Research Collection Journal Article Attitudes towards personal genomics among older Swiss adults: An exploratory study Author(s): Mählmann, Laura; Röcke, Christina; Brand, Angela; Hafen, Ernst; Vayena, Effy Publication Date: 2016 Permanent Link: https://doi.org/10.3929/ethz-b-000114241 Originally published in: Applied and Translational Genomics 8, http://doi.org/10.1016/j.atg.2016.01.009 Rights / License: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International This page was generated automatically upon download from the ETH Zurich Research Collection. For more information please consult the Terms of use. ETH Library Applied & Translational Genomics 8 (2016) 9–15 Contents lists available at ScienceDirect Applied & Translational Genomics journal homepage: www.elsevier.com/locate/atg Attitudes towards personal genomics among older Swiss adults: An exploratory study Laura Mählmann a,b, Christina Röcke c, Angela Brand b, Ernst Hafen a,EffyVayenad,⁎ a Institute of Molecular Systems Biology, ETH Zurich, Auguste-Piccard-Hof 1, 8093 Zürich, Switzerland b Institute for Public Health Genomics, Faculty of Health, Medicine and Life Sciences, Maastricht University, PO Box 616, 6200 MD Maastricht, The Netherlands c University Research Priority Program “Dynamics of Healthy Aging”, University of Zurich, Andreasstrasse 15/Box 2, 8050 Zurich, Switzerland d Health Ethics and Policy Lab, Institute of Epidemiology, Biostatistics and Prevention, University of Zurich, Hirschengraben 84, 8001 Zurich, Switzerland article info abstract Objectives: To explore attitudes of Swiss older adults towards personal genomics (PG). Keywords: Personal genomics Methods: Using an anonymized voluntary paper-and-pencil survey, data were collected from 151 men and Attitudes of older adults women aged 60–89 years attending the Seniorenuniversität Zurich, Switzerland (Seniors' University). -
Proposed National Center for Advancing Translational Sciences Working Group
FINAL - September 21, 2011 National Institutes of Health Advisory Committee to the Director Proposed National Center for Advancing Translational Sciences Working Group SUMMARY OF FINDINGS Members: Maria Freire (chair), Julian Adams, Lee Babiss, Brook Byers, William Chin, Susan Desmond-Hellmann, David Ginsburg, Victoria Hale, Helen Hobbs, Robert Langer, Stelios Papadopoulos, Mary Pendergast, Moncef Slaoui, Marc Tessier-Lavigne, David Valle (full titles and affiliations can be found in Appendix A) Dr. Francis Collins convened a Working Group of the Advisory Committee to the NIH Director (ACD) to help identify innovative research areas and activities whereby the proposed National Center for Advancing Translational Sciences (pNCATS) can substantially contribute to catalyze, invigorate and streamline translational sciences nationally and globally (the full charge to the Working Group can be found in Appendix B). The Working Group met four times over the course of nine months. Its first meeting, on February 4, 2011, was held with members of the NIH Institute and Center Directors Working Group on pNCATS in Bethesda, Maryland. The Working Group also met via teleconference on May 24, 2011, and September 14, 2011, and held an in-person meeting in San Francisco, California, on July 15, 2011, where the group hosted two panel sessions to consult experts in project management and cross-sector partnerships (a list of participants can be found in Appendix C). The following represents the summary findings of the ACD-pNCATS Working Group over the course of these meetings. Revolutionize the Process of Translation: Goals for NCATS The creation of NCATS affords NIH a historic opportunity to catalyze, enable, and implement ground-breaking advances in translational sciences – innovations that will benefit all invested in improving human health. -
The Committee of Prominent Health Researchers and Nobel Laureates
PRESS RELEASE New York, NY, June 14, 2018 FOR IMMEDIATE RELEASE Committee of prominent health researchers and Nobel laureates renames the Prix Galien Pro Bono Humanum Award to recognize the global health leadership of Dr. Roy Vagelos was also the first recipient of the original Pro Bono Humanum Award, established in 2007 under the sponsorship of the late Foundation Honorary President and 1986 Nobel Peace Prize recipient, Pr. Elie Wiesel. That first award cited Dr. Vagelos for his unprecedented decision as CEO of a major global pharmaceutical company to donate the drug Mectizan to patients in 34 countries The Prix Galien USA Committee announced today to treat and prevent river blindness (onchocerciasis), that the Prix Galien Pro Bono Humanum Award a parasitic disease that ranks as a leading cause for individual service to improve the state of of preventable blindness in developing countries, human health will be renamed in honor of for “as much and as long as necessary.” Dr. P. Roy Vagelos, Retired Chairman and CEO, Merck & Co., Inc. Chairman of the Board, As result of this historic act of moral leadership, Regeneron Pharmaceuticals. The Roy Vagelos more than two billion treatments for 250 million Pro Bono Humanum Award for Global Health people in affected areas of the globe have been Equity will be presented at the annual Prix Galien donated by Merck & Co. over the past 30 years, USA Awards ceremony recognizing outstanding resulting in the eradication of the parasite in achievement in innovative medicines discovery on numerous countries in Africa and Latin America. Thursday, October 25, at the American Museum of Natural History in New York City. -
Plant Biology 2012…Going Communicating Plant Biology to the Mobile! General Public AAAS Fellows Class of 2011 Life Is About Choices
ASPB News THE NEWSLETTER OF THE AMERICAN SOCIETY OF PLANT BIOLOGISTS Volume 39, Number 2 March/April 2012 President’s Letter Inside This Issue Walk the Talk to Spread the Word Plant Biology 2012…Going Communicating Plant Biology to the Mobile! General Public AAAS Fellows Class of 2011 Life is about choices. plant biology is at the grocery store, where there’s TAB Articles Now Indexed on PubMed Resources (for most always a rich diversity of safe and relatively inex- of us) are limited, and pensive food. So where’s the problem we so urgently Steve Huber Teaching Tools in Plant every day we must each need to fix, one might ask. Changing this public Biology Seeks Freelance make decisions about where and how we spend perception will require innovative platforms and the Science Editors our time, efforts, and money. Likewise, federal and efforts of all ASPB members as “citizen advocates.” state governments face the continual challenge of We not only can help the public recognize there are prioritizing needs, which is especially important in many potential problems and challenges just ahead times of economic downturn when immediate and that require our action now, but also we must do “pressing” problems tend to receive heightened at- continued on page 5 tention and increased resources. One pressing problem many plant scientists wor- ry about is the sustainable production of sufficient Do you have ideas about how we (and sufficiently nutritious) food for a rapidly grow- can use social media to foster ing global population, especially in light of ongoing dialogue with the public? If so, I climate change. -
August 12, 2021 the Honorable Francis Collins, M.D., Ph.D. Director National Institutes of Health 9000 Rockville Pike Rockvil
August 12, 2021 The Honorable Francis Collins, M.D., Ph.D. Director National Institutes of Health 9000 Rockville Pike Rockville, MD 20892 Dear Director Collins: On May 20, 2021, we sent you a letter requesting information on the National Institutes of Health’s (NIH) 2014 funding pause on gain of function research.1 Your July 29, 2021, response failed to fully address the questions in our letter. Further, NIH’s response to us appears to be nearly identical to your response to another senator’s separate oversight request.2 Your refusal to provide detailed responses that fully address each oversight request is unacceptable. Specifically, the May 20, 2021 letter included 17 requests for documents and information on the 2014 gain of function moratorium.3 Rather than provide detailed responses to each request, NIH only offered a summary about the gain of function research moratorium and its review process for such research.4 Further, NIH claimed that no National Institute of Allergy and Infectious Diseases (NIAID) funding was approved to support gain of function research at the Wuhan lab.5 Yet, your response appeared to suggest that even approved experiments could result in a virus with a gain of function.6 Without any more detailed information, it is unclear whether this has ever occurred. NIH’s lack of response to the May 20 letter shows a complete disregard for congressional oversight and transparency. Congress and the American people have a right to know the complete truth about NIH’s role in funding potentially risky gain of function research. We expect you to specifically address all of our previous information requests and the additional requests below by no later than August 26, 2021: 1 Letter from Ron Johnson, U.S. -
Long View of the Human Genome Project BOOKS & ARTS
Vol 466|19 August 2010 BOOKS & ARTS Long view of the Human Genome Project A bold attempt to tell the complicated story behind the human DNA sequence highlights that social change is needed before personalized medicine can take off, finds Jan Witkowski. Drawing the Map of Life: Inside the Human TTY E Genome Project by Victor K. McElheny Basic Books: 2010. 384 pp. $28, £16.99 S. JAFFE/AFP/G S. In 1985, Robert Sinsheimer, then chancellor of the University of California, Santa Cruz, convened a workshop to discuss sequencing the human genome. It was an audacious proposal: the longest genome that had been sequenced at the time was that of the Epstein- Barr virus, at 172,282 base pairs compared with 3 billion in human DNA. Sinsheimer’s initiative failed. Yet the idea gained momentum when, in 1988, James Watson was appointed associate director of the Office of Genome Research, part of the US National Institutes of Health (NIH). Watson declared 1990 the official start of the publicly funded NIH Human Genome Project (HGP). In 1998, Craig Venter and his company Celera Genomics, then in Rockville, Maryland, joined the race. Ten years ago in June, both projects announced a finish-line draw from President Bill Clinton’s White House. Febru- ary 2011 will mark a decade since the draft sequences were published. Genome-project pioneers: (left to right) Eric Lander, Robert Waterston, James Watson and Francis Collins. In Drawing the Map of Life, science jour- nalist and author Victor McElheny relates McElheny traces the various stages of the In 2000, HGP and Celera jointly announced the story of the HGP, from its methods to the HGP and the power struggles it engendered. -
In Human-Computer Interaction Published, Sold and Distributed By: Now Publishers Inc
Full text available at: http://dx.doi.org/10.1561/1100000067 Communicating Personal Genomic Information to Non-experts: A New Frontier for Human-Computer Interaction Orit Shaer Wellesley College, Wellesley, MA, USA [email protected] Oded Nov New York University, USA [email protected] Lauren Westendorf Wellesley College, Wellesley, MA, USA [email protected] Madeleine Ball Open Humans Foundation, Boston, MA, USA [email protected] Boston — Delft Full text available at: http://dx.doi.org/10.1561/1100000067 Foundations and Trends R in Human-Computer Interaction Published, sold and distributed by: now Publishers Inc. PO Box 1024 Hanover, MA 02339 United States Tel. +1-781-985-4510 www.nowpublishers.com [email protected] Outside North America: now Publishers Inc. PO Box 179 2600 AD Delft The Netherlands Tel. +31-6-51115274 The preferred citation for this publication is O. Shaer, O. Nov, L. Wstendorf, and M. Ball. Communicating Personal Genomic Information to Non-experts: A New Frontier for Human-Computer Interaction. Foundations and Trends R in Human-Computer Interaction, vol. 11, no. 1, pp. 1–62, 2017. R This Foundations and Trends issue was typeset in LATEX using a class file designed by Neal Parikh. Printed on acid-free paper. ISBN: 978-1-68083-254-9 c 2017 O. Shaer, O. Nov, L. Wstendorf, and M. Ball All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, mechanical, photocopying, recording or otherwise, without prior written permission of the publishers. Photocopying. In the USA: This journal is registered at the Copyright Clearance Cen- ter, Inc., 222 Rosewood Drive, Danvers, MA 01923. -
Signature of Controversy
I n “In this volume Granville Sewell provides “As the debate over intelligent design grows T delightful and wide-ranging commentary on increasingly heated... it is refreshing to find a HE the origins debate and intelligent design... discussion of the topic that is calm, thoughtful, Sewell provides much needed clarity on topics and far-ranging, with no sense of having to B e ignature f that are too often misunderstood. His discussion advance an agenda or decimate the opposition. G I S o of the commonly confused problem of entropy In this regard, Granville Sewell’s In the NNI is a must read.” Beginning succeeds brilliantly.” Cornelius G. Hunter, Ph.D. William A. Dembski, Ph.D. N author of The Design Inference author of Science’s Blind Spot G ontroversy A N c In this wide-ranging collection of essays on origins, mathematician Granville Sewell looks at the D big bang, the fine-tuning of the laws of physics, and the evolution of life. He concludes that while O there is much in the history of life that seems to suggest natural causes, there is nothing to support THER Responses to critics of signature in the cEll Charles Darwin’s idea that natural selection of random variations can explain major evolutionary E S advances (“easily the dumbest idea ever taken seriously by science,” he calls it). Sewell explains S A Y why evolution is a fundamentally different and much more difficult problem than others solved s ON by science, and why increasing numbers of scientists are now recognizing what has long been I obvious to the layman, that there is no explanation possible without design. -
A Conversation with Francis Collins Director, National Institutes of Health
A CONVERSATION WITH FRANCIS COLLINS DIRECTOR, NATIONAL INSTITUTES OF HEALTH Dr. Francis Collins is a physician-geneticist noted for his landmark discoveries of disease genes and his leadership of the international Human Genome Project, which culminated in April 2003 with the completion of a finished sequence of the human DNA instruction book. He served as director of the National Human Genome Research Institute at NIH from 1993–2008. He was appointed NIH Director by President Barack Obama in 2009 and selected by President Donald Trump in 2017 to continue to serve in this role. Below is an excerpt from the conversation with Dr. Collins edited for length. Can you talk about some of the things that are on the cusp of being possible today because of biomedical research that maybe even five or ten years ago we wouldn’t have imagined possible? This is the part of my job that’s so fun — looking across the landscape of biomedical research at what’s becoming possible — so I’ll give you three. First, The BRAIN Initiative. The idea is that, with the development of new technologies, we might be able to figure out how the brain actually works — how those circuits in our 86-billion-neuron brain are able to do amazing things. By 2025, we aim to have uncovered some profoundly significant features of how the brain works. For instance, how does a memory get laid down? How do you retrieve it? I believe we’ll be seeing these kinds of things emerging in the next seven or eight years. -
Multigenic Condition Risk Assessment in Direct-To-Consumer Genomic Services Melanie Swan, MBA
ARTICLE Multigenic condition risk assessment in direct-to-consumer genomic services Melanie Swan, MBA Purpose: Gene carrier status and pharmacogenomic data may be de- November 2009, cover 127, 46, and 28 conditions for $429, $985, tectable from single nucleotide polymorphisms (SNPs), but SNP-based and $999, respectively. These 3 services allow consumers to down- research concerning multigenic common disease such as diabetes, can- load their raw genotyping data, which can then be reviewed in 1 cers, and cardiovascular disease is an emerging field. The many SNPs other genome browsers such as the wiki-based SNPedia, where and loci that may relate to common disease have not yet been compre- there are 35 publicly available whole and partial human genomes hensively identified and understood scientifically. In the interim, direct- as of November 2009. Pathway Genomics and Gene Essence have to-consumer (DTC) genomic companies have forged ahead in develop- launched more recently, in mid-2009, and cover 71 and 84 condi- ing composite risk interpretations for multigenic conditions. It is useful tions for $299 and $1,195 respectively. SeqWright also provides a to understand how variance in risk interpretation may arise. Methods: basic service, genotyping 1 million SNPs for $998. 23andMe, A comprehensive study was conducted to analyze the 213 conditions deCODEme, and Pathway Genomics provide 2 services, health covered by the 5 identifiable genome-wide DTC genomic companies, and ancestry testing. Not a lot is known about the overall DTC and the total SNPs (401) and loci (224) assessed in the 20 common genomic testing market size; however, 23andMe reported having 2 disease conditions with the greatest overlapping coverage. -
Personal Genomics for Bioinformaticians
Personal Genomics for Bioinformaticians Instructor: Melissa Gymrek Audience: UCSD grad students (Ph.D. and M.Sc. students) Objective: Given someone’s genome, what could you learn? (Students are encouraged to analyze their own 23&Me data). Student backgrounds: • Computer Science and Engineering • Electrical Engineering • Bioinformatics • Biomedical Sciences Modules: • Introduction to personal genomics • Ancestry • Complex traits • NGS • Mutation hunting Course Resources Course website: https://gymreklab.github.io/teaching/personal_genomics/personal_genomics_2017.html Syllabus: https://s3-us-west-2.amazonaws.com/cse291personalgenomics/genome_course_syllabus_winter17.pdf Materials for generating problem sets: https://github.com/gymreklab/personal-genomics-course-2017 Contact: [email protected] Bioinforma)cs/Genomics Courses @UCLA ¤ h"p://www.bioinformacs.ucla.edu/graduate-courses/ ¤ h"p://www.bioinformacs.ucla.edu/undergraduate-courses/ ¤ All courses require 1 year of programming, a probability course ¤ 3 courses are combined Graduate and Undergraduate Courses ¤ Undergraduate Courses enrollment are primarily students from Computer Science and Undergradaute Bioinformacs Minor (Mostly Life Science Students) ¤ Graduate Enrollment is mostly from Bioinformacs Ph.D. program, Gene0cs and Genomics Ph.D. program, CS Ph.D. Program. ¤ 3 courses are only Graduate Courses ¤ Enrollment is mostly Bioinformacs Ph.D. program and CS Ph.D. Program ¤ Courses are taught by faculty in Computer Science or Stas0cs (or have joint appointments there) Bioinforma)cs/Genomics Courses @UCLA ¤ CM221. Introduc0on to Bioinformacs ¤ Taught by Christopher Lee ¤ Focuses on Classical Bioinformacs Problems and Stas0cal Inference ¤ CM222. Algorithms in Bioinformacs ¤ Taught by Eleazar Eskin ¤ Focuses on Algorithms in Sequencing ¤ CM224. Computaonal Gene0cs ¤ Taught by Eran Halperin ¤ Focuses on Stas0cal Gene0cs and Machine Learning Methods ¤ CM225. Computaonal Methods in Genomics ¤ Taught by Jason Ernst and Bogdan Pasaniuc ¤ Has component of reading recent papers ¤ CM226.