Final Report Puerto Rico Coral Reef Monitoring Program
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Field Guide to the Nonindigenous Marine Fishes of Florida
Field Guide to the Nonindigenous Marine Fishes of Florida Schofield, P. J., J. A. Morris, Jr. and L. Akins Mention of trade names or commercial products does not constitute endorsement or recommendation for their use by the United States goverment. Pamela J. Schofield, Ph.D. U.S. Geological Survey Florida Integrated Science Center 7920 NW 71st Street Gainesville, FL 32653 [email protected] James A. Morris, Jr., Ph.D. National Oceanic and Atmospheric Administration National Ocean Service National Centers for Coastal Ocean Science Center for Coastal Fisheries and Habitat Research 101 Pivers Island Road Beaufort, NC 28516 [email protected] Lad Akins Reef Environmental Education Foundation (REEF) 98300 Overseas Highway Key Largo, FL 33037 [email protected] Suggested Citation: Schofield, P. J., J. A. Morris, Jr. and L. Akins. 2009. Field Guide to Nonindigenous Marine Fishes of Florida. NOAA Technical Memorandum NOS NCCOS 92. Field Guide to Nonindigenous Marine Fishes of Florida Pamela J. Schofield, Ph.D. James A. Morris, Jr., Ph.D. Lad Akins NOAA, National Ocean Service National Centers for Coastal Ocean Science NOAA Technical Memorandum NOS NCCOS 92. September 2009 United States Department of National Oceanic and National Ocean Service Commerce Atmospheric Administration Gary F. Locke Jane Lubchenco John H. Dunnigan Secretary Administrator Assistant Administrator Table of Contents Introduction ................................................................................................ i Methods .....................................................................................................ii -
Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School November 2017 Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E. Hepner University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, Ecology and Evolutionary Biology Commons, and the Other Oceanography and Atmospheric Sciences and Meteorology Commons Scholar Commons Citation Hepner, Megan E., "Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary" (2017). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/7408 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary by Megan E. Hepner A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Marine Science with a concentration in Marine Resource Assessment College of Marine Science University of South Florida Major Professor: Frank Muller-Karger, Ph.D. Christopher Stallings, Ph.D. Steve Gittings, Ph.D. Date of Approval: October 31st, 2017 Keywords: Species richness, biodiversity, functional diversity, species traits Copyright © 2017, Megan E. Hepner ACKNOWLEDGMENTS I am indebted to my major advisor, Dr. Frank Muller-Karger, who provided opportunities for me to strengthen my skills as a researcher on research cruises, dive surveys, and in the laboratory, and as a communicator through oral and presentations at conferences, and for encouraging my participation as a full team member in various meetings of the Marine Biodiversity Observation Network (MBON) and other science meetings. -
Fauna Atingida Por Acidentes Ambientais Envolvendo Produtos Químicos
Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz Departamento de Ciências do Solo Curso de Especialização em Gerenciamento Ambiental Sérgio Greif FAUNA ATINGIDA POR ACIDENTES AMBIENTAIS ENVOLVENDO PRODUTOS QUÍMICOS Orientadora: Biól. Iris Regina Fernandes Poffo (PhD.) São Paulo 2017 Universidade de São Paulo Escola Superior de Agricultura Luiz de Queiroz Departamento de Ciências do Solo Curso de Especialização em Gerenciamento Ambiental Sérgio Greif FAUNA ATINGIDA POR ACIDENTES AMBIENTAIS ENVOLVENDO PRODUTOS QUÍMICOS Orientadora: Biól. Iris Regina Fernandes Poffo (PhD.) Trabalho apresentado como pré-requisito para a obtenção de Certificado de Conclusão de Curso de Especialização em Gerenciamento Ambiental São Paulo 2017 iii “Nós nos tornamos, pelo poder de um glorioso acidente evolucionário chamado inteligência, mordomos da continuidade da vida na Terra. Não pedimos este papel, mas não podemos renegá-lo. Podemos não ser adequados para isso, mas aqui estamos." — Stephen Jay Gould iv SUMÁRIO SUMÁRIO......................................................................................................... iv . ......................................................................................... DEDICATÓRIA................................................................................................. vi ... ......................................................................................... AGRADECIMENTOS....................................................................................... vii . RELAÇÃO DE -
CORAL REEF COMMUNITIES from NATURAL RESERVES in PUERTO RICO : a Quantitative Baseline Assessment for Prospective Monitoring Programs
Final Report CORAL REEF COMMUNITIES FROM NATURAL RESERVES IN PUERTO RICO : a quantitative baseline assessment for prospective monitoring programs Volume 2 : Cabo Rojo, La Parguera, Isla Desecheo, Isla de Mona by : Jorge (Reni) García-Sais Roberto L. Castro Jorge Sabater Clavell Milton Carlo Reef Surveys P. O. Box 3015, Lajas, P. R. 00667 [email protected] Final report submitted to the U. S. Coral Reef Initiative (CRI-NOAA) and DNER August, 2001 i PREFACE A baseline quantitative assessment of coral reef communities in Natural Reserves is one of the priorities of the U. S. Coral Reef Initiative Program (NOAA) for Puerto Rico. This work is intended to serve as the framework of a prospective research program in which the ecological health of these valuable marine ecosystems can be monitored. An expanded and more specialized research program should progressively construct a far more comprehensive characterization of the reef communities than what this initial work provides. It is intended that the better understanding of reef communities and the available scientific data made available through this research can be applied towards management programs designed at the protection of coral reefs and associated fisheries in Puerto Rico and the Caribbean. More likely, this is not going to happen without a bold public awareness program running parallel to the basic scientific effort. Thus, the content of this document is simplified enough as to allow application into public outreach and education programs. This is the second of three volumes providing quantitative baseline characterizations of coral reefs from Natural Reserves in Puerto Rico. ACKNOWLEDGEMENTS The authors want to express their sincere gratitude to Mrs. -
Field Manual for Coral Reef Assessments
EPA/600/R-12/029 | April 2012 |www.epa.gov/ged Field Manual for Coral Reef Assessments Office of Research and Development National Health and Environmental Effects Research Laboratory Gulf Ecology Division Field Manual for Coral Reef Assessments Deborah L. Santavy William S. Fisher Jed G. Campbell Robert L. Quarles Gulf Ecology Division National Health and Environmental Effects Research Laboratory Office of Research and Development U.S. Environmental Protection Agency 1 Sabine Island Dr. Gulf Breeze, FL. 32561 Notice and Disclaimer The U.S. Environmental Protection Agency through its Office of Research and Development and Office of Water funded and collaborated in the research and development of these field protocols. It has been subjected to the Agency’s peer and administrative review and has been approved for publication as an EPA document. Mention of trade names or commercial products does not constitute endorsement or recommendation for use. This is a contribution to the EPA Office of Research and Development’s Safe and Sustainable Water Resources Program, Coral Reefs Project. The appropriate citation for this report is: Santavy DL, Fisher WS, Campbell JG and Quarles RL. 2012. Field Manual for Coral Reef Assessments. U.S. Environmental Protection Agency, Office of Research and Development, Gulf Ecology Division, Gulf Breeze, FL. EPA/600/R-12/029. April 2012. This document can be downloaded from EPA’s website at: http://www.epa.gov/ged/publications.html ii Table of Contents Notice and Disclaimer ................................................................................................................................ -
Sharkcam Fishes
SharkCam Fishes A Guide to Nekton at Frying Pan Tower By Erin J. Burge, Christopher E. O’Brien, and jon-newbie 1 Table of Contents Identification Images Species Profiles Additional Info Index Trevor Mendelow, designer of SharkCam, on August 31, 2014, the day of the original SharkCam installation. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 5th edition by Erin J. Burge, Christopher E. O’Brien, and jon-newbie is licensed under the Creative Commons Attribution-Noncommercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/. For questions related to this guide or its usage contact Erin Burge. The suggested citation for this guide is: Burge EJ, CE O’Brien and jon-newbie. 2020. SharkCam Fishes. A Guide to Nekton at Frying Pan Tower. 5th edition. Los Angeles: Explore.org Ocean Frontiers. 201 pp. Available online http://explore.org/live-cams/player/shark-cam. Guide version 5.0. 24 February 2020. 2 Table of Contents Identification Images Species Profiles Additional Info Index TABLE OF CONTENTS SILVERY FISHES (23) ........................... 47 African Pompano ......................................... 48 FOREWORD AND INTRODUCTION .............. 6 Crevalle Jack ................................................. 49 IDENTIFICATION IMAGES ...................... 10 Permit .......................................................... 50 Sharks and Rays ........................................ 10 Almaco Jack ................................................. 51 Illustrations of SharkCam -
Comprehensive Phylogenomic Analyses Resolve Cnidarian Relationships and the Origins of Key Organismal Traits
Comprehensive phylogenomic analyses resolve cnidarian relationships and the origins of key organismal traits Ehsan Kayal1,2, Bastian Bentlage1,3, M. Sabrina Pankey5, Aki H. Ohdera4, Monica Medina4, David C. Plachetzki5*, Allen G. Collins1,6, Joseph F. Ryan7,8* Authors Institutions: 1. Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution 2. UPMC, CNRS, FR2424, ABiMS, Station Biologique, 29680 Roscoff, France 3. Marine Laboratory, university of Guam, UOG Station, Mangilao, GU 96923, USA 4. Department of Biology, Pennsylvania State University, University Park, PA, USA 5. Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH, USA 6. National Systematics Laboratory, NOAA Fisheries, National Museum of Natural History, Smithsonian Institution 7. Whitney Laboratory for Marine Bioscience, University of Florida, St Augustine, FL, USA 8. Department of Biology, University of Florida, Gainesville, FL, USA PeerJ Preprints | https://doi.org/10.7287/peerj.preprints.3172v1 | CC BY 4.0 Open Access | rec: 21 Aug 2017, publ: 21 Aug 20171 Abstract Background: The phylogeny of Cnidaria has been a source of debate for decades, during which nearly all-possible relationships among the major lineages have been proposed. The ecological success of Cnidaria is predicated on several fascinating organismal innovations including symbiosis, colonial body plans and elaborate life histories, however, understanding the origins and subsequent diversification of these traits remains difficult due to persistent uncertainty surrounding the evolutionary relationships within Cnidaria. While recent phylogenomic studies have advanced our knowledge of the cnidarian tree of life, no analysis to date has included genome scale data for each major cnidarian lineage. Results: Here we describe a well-supported hypothesis for cnidarian phylogeny based on phylogenomic analyses of new and existing genome scale data that includes representatives of all cnidarian classes. -
Coral Injuries Caused by Spirobranchus Opercula with and Without Epibiotic Turf Algae at Curaçao
Marine Biology (2019) 166:60 https://doi.org/10.1007/s00227-019-3504-6 SHORT NOTE Coral injuries caused by Spirobranchus opercula with and without epibiotic turf algae at Curaçao Bert W. Hoeksema1,2 · Dagmar Wels1 · Roeland J. van der Schoot1 · Harry A. ten Hove1 Received: 11 January 2019 / Accepted: 26 March 2019 © The Author(s) 2019 Abstract Reef-dwelling Christmas tree worms (Spirobranchus spp.) are common coral associates. Their calcareous tubes are usually embedded in the coral skeleton and can be closed by an operculum. Tubes not overgrown by coral tissue either remain bare or become covered by algae. Despite their widespread distribution, high abundance and striking appearance, little is known about the impact of these worms on their hosts. We quantifed visible coral damage caused by Spirobranchus in Curaçao (Southern Caribbean) and found that 62.6% of worm opercula (n = 1323) caused abrasions and tissue loss in their hosts. Filamentous turf algae, known to be potentially harmful to corals, covered 76.9% of the opercula. Examination of the six most frequently inhabited host species showed a variation in the damage percentages, although this was independent of the presence of epibiotic algae on 78.4% of all opercula. Since injured corals are more susceptible to diseases, the overall nega- tive impact of Spirobranchus worms on their hosts may be more severe than previously assumed. Introduction and Nishihira 1996), even if the host becomes overgrown by sponges and octocorals, which in turn can act as replacement Coral-dwelling tubeworms of the genus Spirobranchus hosts (Hoeksema et al. 2015, 2016; García-Hernández and (Polychaeta: Serpulidae), known popularly as Christmas Hoeksema 2017). -
The Role of Threespot Damselfish (Stegastes Planifrons)
THE ROLE OF THREESPOT DAMSELFISH (STEGASTES PLANIFRONS) AS A KEYSTONE SPECIES IN A BAHAMIAN PATCH REEF A thesis presented to the faculty of the College of Arts and Sciences of Ohio University In partial fulfillment of the requirements for the degree Masters of Science Brooke A. Axline-Minotti August 2003 This thesis entitled THE ROLE OF THREESPOT DAMSELFISH (STEGASTES PLANIFRONS) AS A KEYSTONE SPECIES IN A BAHAMIAN PATCH REEF BY BROOKE A. AXLINE-MINOTTI has been approved for the Program of Environmental Studies and the College of Arts and Sciences by Molly R. Morris Associate Professor of Biological Sciences Leslie A. Flemming Dean, College of Arts and Sciences Axline-Minotti, Brooke A. M.S. August 2003. Environmental Studies The Role of Threespot Damselfish (Stegastes planifrons) as a Keystone Species in a Bahamian Patch Reef. (76 pp.) Director of Thesis: Molly R. Morris Abstract The purpose of this research is to identify the role of the threespot damselfish (Stegastes planifrons) as a keystone species. Measurements from four functional groups (algae, coral, fish, and a combined group of slow and sessile organisms) were made in various territories ranging from zero to three damselfish. Within territories containing damselfish, attack rates from the damselfish were also counted. Measures of both aggressive behavior and density of threespot damselfish were correlated with components of biodiversity in three of the four functional groups, suggesting that damselfish play an important role as a keystone species in this community. While damselfish density and measures of aggression were correlated, in some cases only density was correlated with a functional group, suggesting that damselfish influence their community through mechanisms other than behavior. -
Species Are Hypotheses: Avoid Connectivity Assessments Based on Pillars of Sand Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D
Species are hypotheses: avoid connectivity assessments based on pillars of sand Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, Magalie Castelin, Anne Chenuil, Christophe Destombe, Didier Forcioli, Myriam Valero, et al. To cite this version: Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, et al.. Species are hypotheses: avoid connectivity assessments based on pillars of sand. Molecular Ecology, Wiley, 2015, 24 (3), pp.525-544. hal-02002440 HAL Id: hal-02002440 https://hal.archives-ouvertes.fr/hal-02002440 Submitted on 31 Jan 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Molecular Ecology Species are hypotheses : avoid basing connectivity assessments on pillars of sand. Journal:For Molecular Review Ecology Only Manuscript ID: Draft Manuscript Type: Invited Reviews and Syntheses Date Submitted by the Author: n/a Complete List of Authors: Pante, Eric; UMR 7266 CNRS - Université de La Rochelle, Puillandre, Nicolas; MNHN, Systematique & Evolution Viricel, Amélia; UMR 7266 CNRS - -
The Global Trade in Marine Ornamental Species
From Ocean to Aquarium The global trade in marine ornamental species Colette Wabnitz, Michelle Taylor, Edmund Green and Tries Razak From Ocean to Aquarium The global trade in marine ornamental species Colette Wabnitz, Michelle Taylor, Edmund Green and Tries Razak ACKNOWLEDGEMENTS UNEP World Conservation This report would not have been The authors would like to thank Helen Monitoring Centre possible without the participation of Corrigan for her help with the analyses 219 Huntingdon Road many colleagues from the Marine of CITES data, and Sarah Ferriss for Cambridge CB3 0DL, UK Aquarium Council, particularly assisting in assembling information Tel: +44 (0) 1223 277314 Aquilino A. Alvarez, Paul Holthus and and analysing Annex D and GMAD data Fax: +44 (0) 1223 277136 Peter Scott, and all trading companies on Hippocampus spp. We are grateful E-mail: [email protected] who made data available to us for to Neville Ash for reviewing and editing Website: www.unep-wcmc.org inclusion into GMAD. The kind earlier versions of the manuscript. Director: Mark Collins assistance of Akbar, John Brandt, Thanks also for additional John Caldwell, Lucy Conway, Emily comments to Katharina Fabricius, THE UNEP WORLD CONSERVATION Corcoran, Keith Davenport, John Daphné Fautin, Bert Hoeksema, Caroline MONITORING CENTRE is the biodiversity Dawes, MM Faugère et Gavand, Cédric Raymakers and Charles Veron; for assessment and policy implemen- Genevois, Thomas Jung, Peter Karn, providing reprints, to Alan Friedlander, tation arm of the United Nations Firoze Nathani, Manfred Menzel, Julie Hawkins, Sherry Larkin and Tom Environment Programme (UNEP), the Davide di Mohtarami, Edward Molou, Ogawa; and for providing the picture on world’s foremost intergovernmental environmental organization. -
Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes
Old Dominion University ODU Digital Commons Biological Sciences Theses & Dissertations Biological Sciences Summer 2016 Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes Christi Linardich Old Dominion University, [email protected] Follow this and additional works at: https://digitalcommons.odu.edu/biology_etds Part of the Biodiversity Commons, Biology Commons, Environmental Health and Protection Commons, and the Marine Biology Commons Recommended Citation Linardich, Christi. "Hotspots, Extinction Risk and Conservation Priorities of Greater Caribbean and Gulf of Mexico Marine Bony Shorefishes" (2016). Master of Science (MS), Thesis, Biological Sciences, Old Dominion University, DOI: 10.25777/hydh-jp82 https://digitalcommons.odu.edu/biology_etds/13 This Thesis is brought to you for free and open access by the Biological Sciences at ODU Digital Commons. It has been accepted for inclusion in Biological Sciences Theses & Dissertations by an authorized administrator of ODU Digital Commons. For more information, please contact [email protected]. HOTSPOTS, EXTINCTION RISK AND CONSERVATION PRIORITIES OF GREATER CARIBBEAN AND GULF OF MEXICO MARINE BONY SHOREFISHES by Christi Linardich B.A. December 2006, Florida Gulf Coast University A Thesis Submitted to the Faculty of Old Dominion University in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE BIOLOGY OLD DOMINION UNIVERSITY August 2016 Approved by: Kent E. Carpenter (Advisor) Beth Polidoro (Member) Holly Gaff (Member) ABSTRACT HOTSPOTS, EXTINCTION RISK AND CONSERVATION PRIORITIES OF GREATER CARIBBEAN AND GULF OF MEXICO MARINE BONY SHOREFISHES Christi Linardich Old Dominion University, 2016 Advisor: Dr. Kent E. Carpenter Understanding the status of species is important for allocation of resources to redress biodiversity loss.