<I>Cortinarius Mikedavisii</I>
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The Largest Type Study of <I>Agaricales</I
Persoonia 33, 2014: 98–140 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X684681 The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era K. Liimatainen1, T. Niskanen1, B. Dima!, I. Kytövuori2, J.F. Ammirati3, T.G. Frøslev4 Key words Abstract Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or Basidiomycota more times under separate names. This study focuses on subg. Phlegmacium as traditionally defined and includes diversity species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study DNA barcoding type material to determine which species already have been described; ii) stabilize the use of Friesian and other ITS older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of taxonomy studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 typification types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released. Article info Received: 2 July 2013; Accepted: 24 February 2014; Published: 8 September 2014. -
Suomen Helttasienten Ja Tattien Ekologia, Levinneisyys Ja Uhanalaisuus
Suomen ympäristö 769 LUONTO JA LUONNONVARAT Pertti Salo, Tuomo Niemelä, Ulla Nummela-Salo ja Esteri Ohenoja (toim.) Suomen helttasienten ja tattien ekologia, levinneisyys ja uhanalaisuus .......................... SUOMEN YMPÄRISTÖKESKUS Suomen ympäristö 769 Pertti Salo, Tuomo Niemelä, Ulla Nummela-Salo ja Esteri Ohenoja (toim.) Suomen helttasienten ja tattien ekologia, levinneisyys ja uhanalaisuus SUOMEN YMPÄRISTÖKESKUS Viittausohje Viitatessa tämän raportin lukuihin, käytetään lukujen otsikoita ja lukujen kirjoittajien nimiä: Esim. luku 5.2: Kytövuori, I., Nummela-Salo, U., Ohenoja, E., Salo, P. & Vauras, J. 2005: Helttasienten ja tattien levinneisyystaulukko. Julk.: Salo, P., Niemelä, T., Nummela-Salo, U. & Ohenoja, E. (toim.). Suomen helttasienten ja tattien ekologia, levin- neisyys ja uhanalaisuus. Suomen ympäristökeskus, Helsinki. Suomen ympäristö 769. Ss. 109-224. Recommended citation E.g. chapter 5.2: Kytövuori, I., Nummela-Salo, U., Ohenoja, E., Salo, P. & Vauras, J. 2005: Helttasienten ja tattien levinneisyystaulukko. Distribution table of agarics and boletes in Finland. Publ.: Salo, P., Niemelä, T., Nummela- Salo, U. & Ohenoja, E. (eds.). Suomen helttasienten ja tattien ekologia, levinneisyys ja uhanalaisuus. Suomen ympäristökeskus, Helsinki. Suomen ympäristö 769. Pp. 109-224. Julkaisu on saatavana myös Internetistä: www.ymparisto.fi/julkaisut ISBN 952-11-1996-9 (nid.) ISBN 952-11-1997-7 (PDF) ISSN 1238-7312 Kannen kuvat / Cover pictures Vasen ylä / Top left: Paljakkaa. Utsjoki. Treeless alpine tundra zone. Utsjoki. Kuva / Photo: Esteri Ohenoja Vasen ala / Down left: Jalopuulehtoa. Parainen, Lenholm. Quercus robur forest. Parainen, Lenholm. Kuva / Photo: Tuomo Niemelä Oikea ylä / Top right: Lehtolohisieni (Laccaria amethystina). Amethyst Deceiver (Laccaria amethystina). Kuva / Photo: Pertti Salo Oikea ala / Down right: Vanhaa metsää. Sodankylä, Luosto. Old virgin forest. Sodankylä, Luosto. Kuva / Photo: Tuomo Niemelä Takakansi / Back cover: Ukonsieni (Macrolepiota procera). -
Morphological and Molecular Phylogeny of Cortinarius Rufo-Olivaceus (Pers.) Fr
KSÜ Tarım ve Doğa Derg 23 (3): 600-605, 2020 KSU J. Agric Nat 23 (3): 600-605, 2020 DOI:10.18016/ksutarimdoga.vi.671275 Morphological and Molecular Phylogeny of Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Collected from Tokat Region Meryem Şenay ŞENGÜL DEMİRAK1, Hakan IŞIK2, İbrahim TÜRKEKUL3 1Tokat Gaziosmanpasa University, Faculty of Arts and Sciences, Department of Molecular Biology and Genetics, 60200, Tokat, 2Tokat M.Emin Saraç Anatolian Religious High School, 60030, Tokat, 3Tokat Gaziosmanpaşa University, Faculty of Arts and Sciences, Department of Biology, 60200, Tokat, Turkey 1https://orcid.org/0000-0003-4879-1908, 2https://orcid.org/0000-0001-8241-0078, , 3https://orcid.org/0000-0002-1036-9835 : [email protected] ABSTRACT Research Article Cortinarius (Pers.) Gray samples were collected in the oak forests from Tokat province. Macro and micromorphological features as well Article History as molecular phylogenetic analyses according to the DNA sequences Received : 06.01.2020 corresponding to internal transcribed spacer region (ITS) and the Accepted : 20.02.2020 large subunit (LSU) of nuclear ribosomal RNA gene regions indicated that the studied specimen is a Cortinarius rufo-olivaceus Keywords (Pers.) Fr. This study determined the first microscopic and Cortinarius macroscopic morphological description and molecular phylogenetic Macrofungi New locality analysis of the Cortinarius rufo-olivaceus (Pers.) Fr. in Turkey. ITS LSU Tokat Yöresinden Toplanan Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Türünün Morfolojik ve Moleküler Filogenisi ÖZET Araştırma Makalesi Cortinarius (Pers.) Gray örnekleri Tokat ilinden meşe ormanlarında toplanmıştır. Makro ve mikromorfolojik özellikler ile nükleer Makale Tarihçesi ribozomal iç aralayıcı bölge (ITS) ve ribozomal en büyük alt birim Geliş Tarihi : 06.01.2020 (LSU) gen bölgelerine karşılık gelen DNA dizileri ile moleküler Kabul Tarihi : 20.02.2020 filogenetik analizler, çalışılan numunenin Cortinarius rufo-olivaceus (Pers.) Fr. -
Cortinarius) Into the DNA Era
Persoonia 33, 2014: 98–140 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X684681 The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era K. Liimatainen1, T. Niskanen1, B. Dima!, I. Kytövuori2, J.F. Ammirati3, T.G. Frøslev4 Key words Abstract Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or Basidiomycota more times under separate names. This study focuses on subg. Phlegmacium as traditionally defined and includes diversity species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study DNA barcoding type material to determine which species already have been described; ii) stabilize the use of Friesian and other ITS older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of taxonomy studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 typification types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released. Article info Received: 2 July 2013; Accepted: 24 February 2014; Published: 8 September 2014. -
Nº 14 2009 Escuela De Jardineria Y Paisaje Excm
2009 BUTLLETÍ SOCIETAT MICOLÒGICA VALENCIANA FUNDACIÓN MUNICIPAL Nº 14 2009 ESCUELA DE JARDINERIA Y PAISAJE EXCM. AJUNTAMENT DE VALÈNCIA 14 Butll. Soc. Micol. Valenciana 14.2009 5¢ -<5+(*0Ô54<50*07(3 ,:*<,3(+,1(9+05,9Ð(@7(0:(1, ,?*4(1<5;(4,5;+,=(3Ï5*0( 1 Butll. Soc. Micol. Valenciana 14.2009 REALITZAT PER LA SOCIETAT MICOLÒGICA VALENCIANA, 2 Butll. Soc. Micol. Valenciana 14.2009 MYXOMYCETES IBÉRICOS. III. M. OLTRA(1) & E. GRACIA(2) (1)Departamento de Biología Vegetal. Universidad de Alcalá de Henares. E-28871 Alcalá de Henares (Madrid). (2)Departament de Biologia Vegetal. Universitat de Barcelona. Avinguda Diagonal nº 645. E-08028. Barcelona. Summary: OLTRA, M. & E. GRACIA (2009). Myxomycetes Ibéricos III. Butll. Soc. Micol. Valen- ciana nº 14: pag 003-037. Hundred twenty (120) taxa of Myxomycetes from the Iberian Península are recorded here. Data on their ecology, chorology and habitat are also added. Key words: Myxomycetes, chorology, ecology, phenology, Iberian Peninsula. Resumen: OLTRA, M. & E. GRACIA (2009). Myxomycetes Ibéricos III. Butll. Soc. Micol. Valen- ciana nº 14: pag 003-037. Citamos ciento veinte taxones (120) de Myxomycetes procedentes de la Península Ibérica, apor- tando datos sobre su ecología, localización geográfica, fecha y hábitat. Palabra clave: Myxomycetes, corología, ecología, fenología, Península Ibérica. INTRODUCCIÓN Publicamos un grupo de especies procedentes de herborizaciónes realizadas en la Península Ibérica. Aportamos detalles de substrato, localidad, fecha de las colecciones y datos de altitud. Estos datos son necesarios para ampliar el catálogo florístico, ecoló- gico y fenológico de la Península Ibérica. MATERIAL Y MÉTODOS Las referencias a los protólogos y sinónimos pueden encontrarse en cualquiera de las obras de MARTIN & ALEXOPOULOS (1969), FARR (1976), NANNENGA-BREMEKAMP (1991) y LADO (2001). -
Diversité Des Symbioses Ectomycorhiziennes Dans Les
DIVERSITE DES SYMBIOSES ECTOMYCORHIZIENNES DANS LES ECOSYSTEMES FORESTIERS NATURELS SUR SOLS ULTRAMAFIQUES DE NOUVELLE- CALEDONIE 1 * 1 2, 3 4 5 6 PAR PRIN Y. , DUCOUSSO M. , TASSIN J. , BENA G. , JOURAND P. , DUMONTET V. , 4 4 5, 7 4 4 4, MOULIN L. , CONTESTO C. , AMBROSI J. P. , CHAINTREUIL C. , DREYFUS B. , LEBRUN M. 5 Dédié à la mémoire de notre ami Nicolas Perrier 1 Cirad UMR LSTM, 34398 Montpellier Cedex 5, France. 2 IAC, Forêt, F-98800 Nouméa, Nouvelle-Calédonie. 3 Cirad, UPR Dynamique des forêts naturelles, 34398 Montpellier Cedex 5. 4 IRD, UMR LSTM, F-34398 Montpellier Cedex 5, France. 5 IRD, F-98848 Nouméa, Nouvelle-Calédonie. 6 CNRS, Laboratoire des plantes médicinales, 98848 Nouméa Cedex, Nouvelle-Calédonie. 7 CNRS UMR CEREGE, F-13545 Aix-en-Provence, France. 444 1. INTRODUCTION La Nouvelle-Calédonie est un groupe relativement restreint d'îles (20 000 km2), situé dans l'océan Pacifique sud. Son histoire géologique est directement liée à celle du supercontinent Gondwana jusqu'à 80 millions d'années lorsque la marge orientale du Gondwana a commencé à se briser (Veevers, 1986 ; Veevers et al., 1991). Une histoire géologique complexe a conduit à la mise en place de grands gisements de minerai de nickel situés dans le régolithe latéritique, ce qui, selon l’International Nickel Study Group, place cette île au 4e rang mondial pour la production de minerai de nickel sur la période 1993-2001. Le massif du Koniambo est l'un de ces gisements de minerai, tous relativement isolés les uns des autres, dans la province du Nord. -
Macrofungi of Derebucak District (Konya, Turkey)*
Turk J Bot 34 (2010) 335-350 © TÜBİTAK Research Note doi:10.3906/bot-0906-14 Macrofungi of Derebucak district (Konya, Turkey)* Sinan ALKAN**, Gıyasettin KAŞIK, Sinan AKTAŞ Selçuk University, Science Faculty, Biology Department, Campus, Konya - TURKEY Received: 03.06.2009 Accepted: 31.01.2010 Abstract: Macrofungi specimens were collected from different localities in Derebucak district (Konya province) between 2005 and 2007, particularly during the autumn and spring. As a result 134 species were identified. Thirteen of them belong to Ascomycota, and the other 121 belong to the division Basidiomycota. According to the present literature about the macrofungi of Turkey, 6 taxa are new records for Turkey. These are Lachnellula calyciformis (Willd.) Dharne of the division Ascomycota,andHebeloma stenocystis J.Favre, Cortinarius calochrous var. coniferarum (M.M.Moser) Nezdojm., Cortinarius cupreorufus Brandrud, Inocybe ayeri Furrer-Ziogas, and Calocera pallidospathulata D.A.Reid of the division Basidiomycota. Key words: Macrofungi, new records, Derebucak, Konya, Turkey Derebucak (Konya - Türkiye) ilçesi makrofungusları Özet: Bu çalışmada, Derebucak (Konya) ilçesinde farklı lokalitelerden 2005–2007 yıllarında özellikle ilkbahar ve sonbahar aylarında makrofungus örnekleri toplanmıştır. Sonuçta 134 makrofungus türü belirlenmiştir. Bu türlerin 13’ü Ascomycota, 121’i Basidiomycota bölümüne aittir. Makrofunguslar ile ilgili mevcut literatüre göre, 6 türün Türkiye için yeni kayıt olduğu tespit edilmiştir. Bunlar: Ascomycota bölümünden Lachnellula calyciformis (Willd.) Dharne’dir, Basidiomycota bölümünden ise Hebeloma stenocystis J.Favre, Cortinarius calochrous var. coniferarum (M.M. Moser) Nezdojm., Cortinarius cupreorufus Brandrud, Inocybe ayeri Furrer-Ziogas, Calocera pallidospathulata D.A.Reid’dır. Anahtar sözcükler: Makrofunguslar, yeni kayıtlar, Derebucak, Konya, Türkiye Introduction Sesli & Denchev, 2009). Except for our study there is Our study area, Derebucak, is 140 km west of the no report in the literature on the macrofungi flora of centre of the city of Konya. -
Selçuk Üniversitesi Dijital Arşiv Sistemi
T.C. SELÇUK ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ DEREBUCAK (KONYA) İLÇESİ MAKROFUNGUSLARI Sinan ALKAN YÜKSEK LİSANS TEZİ BİYOLOJİ ANA BİLİM DALI KONYA, 2007 DEREBUCAK (KONYA) İLÇESİ MAKROFUNGUSLARI Sinan ALKAN YÜKSEK LİSANS TEZİ BİYOLOJİ ANA BİLİM DALI KONYA, 2007 T.C. SELÇUK ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ DEREBUCAK (KONYA) İLÇESİ MAKROFUNGUSLARI Sinan ALKAN YÜKSEK LİSANS TEZİ BİYOLOJİ ANABİLİM DALI Bu tez 02.01.2008 tarihinde aşağıdaki jüri tarafından oy birliği ile kabul edilmiştir. Prof. Dr. Yusuf DURAK BAŞKAN Doç.Dr.Gıyasettin KAŞIK Doç. Dr. Celaleddin ÖZTÜRK ÜYE (Danışman) ÜYE ÖZET Yüksek Lisans Tezi DEREBUCAK (KONYA) LÇES MAKROFUNGUSLARI Sinan ALKAN Selçuk Üniversitesi Fen Bilimleri Enstitüsü Biyoloji Ana Bilim Dalı Danıman: Doç. Dr. Gıyasettin KAIK 2007, 106 Sayfa Jüri: Doç. Dr. Gıyasettin KAIK Prof. Dr. Yusuf DURAK Doç. Dr. Celaleddin ÖZTÜRK Bu çalımada, Derebucak (Konya) ilçesinde farklı lokalitelerden 2005-2007 yıllarında özellikle ilkbahar ve sonbahar aylarında 375 makrofungus örnei toplanmıtır. Arazi ve laboratuvar çalıması sonucunda, toplam iki bölüm, iki sınıf, 11 takım, 36 familya ve 70 cins’e ait 136 makrofungus türü belirlenmitir. Bu türlerin 13’ü Ascomycota, 123’ü Basidiomycota bölümüne aittir. Makrofunguslar ile ilili mevcut literatüre göre, 8 türün Türkiye için yeni kayıt olduu tespit edilmitir. Bunlar: Ascomycetes sınıfından “Lachnellula calyciformis (Willd.: Fr.) Dharne’dir, Basidiomycetes sınıfından ise “Hebeloma stenocystis Favre: Quadr., Cortinarius calochrous (Mos.) Nezd., Cortinarius cupreorufus Brandrud, Inocybe ayeri Furrer-Ziogas, Inocybe leiocephala Stuntz, Hohenbuehelia semiinfundibuliformis (Karst.) Sing., Calocera pallido-spathulata Reid.’dır. Anahtar Kelimeler: Makrofunguslar, Taksonomi, Yeni Kayıtlar, Derebucak, Konya, Türkiye. i ABSTRACT Ms Thesis MACROFUNGI of DEREBUCAK (KONYA) PROVINCE Sinan ALKAN Selçuk University Graduate School of Natural and Applied Sciences Biology Department Supervisior: Assoc.