Female Gamete Competition in an Ancient Angiosperm Lineage
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Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Oldest Record of Trimeniaceae from the Early Cretaceous of Northern
BMC Evolutionary Biology BioMed Central Research article Open Access Oldest record of Trimeniaceae from the Early Cretaceous of northern Japan Toshihiro Yamada*1, Harufumi Nishida2, Masayoshi Umebayashi1, Kazuhiko Uemura3 and Masahiro Kato4 Address: 1Division of Life Sciences, Graduate School of Natural Science and Technology, Kanazawa University, Kanazawa 920-1192, Japan, 2Faculty of Science and Engineering, Chuo University, Tokyo 112-8551, Japan, 3Department of Geology and Paleontology, National Museum of Nature and Science, 3-23-1 Hyakunincho, Tokyo 169-0073, Japan and 4Department of Botany, National Museum of Nature and Science, Tsukuba 305-0005, Japan Email: Toshihiro Yamada* - [email protected]; Harufumi Nishida - [email protected]; Masayoshi Umebayashi - [email protected]; Kazuhiko Uemura - [email protected]; Masahiro Kato - [email protected] * Corresponding author Published: 8 May 2008 Received: 22 February 2008 Accepted: 8 May 2008 BMC Evolutionary Biology 2008, 8:135 doi:10.1186/1471-2148-8-135 This article is available from: http://www.biomedcentral.com/1471-2148/8/135 © 2008 Yamada et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Molecular phylogenetic analyses have identified Trimeniaceae, a monotypic family distributed only in Oceania, as among the earliest diverging families of extant angiosperms. Therefore, the fossils of this family are helpful to understand the earliest flowering plants. Paleobotanical information is also important to track the historical and geographical pathways to endemism of the Trimeniaceae. -
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Cenomanian Angiosperm Leaf Megafossils, Dakota Formation, Rose Creek Locality, Jefferson County, Southeastern Nebraska By GARLAND R. UPCHURCH, JR. and DAVID L. DILCHER U.S. GEOLOGICAL SURVEY BULLETIN 1915 DEPARTMENT OF THE INTERIOR MANUEL LUJAN, JR., Secretary U.S. GEOLOGICAL SURVEY Dallas L. Peck, Director Any use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Government. UNITED STATES GOVERNMENT PRINTING OFFICE: 1990 For sale by the Books and Open-File Reports Section U.S. Geological Survey Federal Center Box 25425 Denver. CO 80225 Library of Congress Cataloging-in-Publication Data Upchurch, Garland R. Cenomanian angiosperm leaf megafossils, Dakota Formation, Rose Creek locality, Jefferson County, southeastern Nebraska / by Garland R. Upchurch, Jr., and David L. Dilcher. p. cm.-(U.S. Geological Survey bulletin; 1915) Includes bibliographical references. Supt. of Docs. no.: 1 19.3:1915. 1. Leaves, Fossil-Nebraska-Jefferson County. 2. Paleobotany-Cretaceous. 3. Paleobotany-Nebraska-Jefferson County. I. Dilcher, David L. II. Title. III. Series. QE75.B9 no. 1915 [QE983] 557.3 s-dc20 90-2855 [561'.2]CIP CONTENTS Abstract 1 Introduction 1 Acknowledgments 2 Materials and methods 2 Criteria for classification 3 Geological setting and description of fossil plant locality 4 Floristic composition 7 Evolutionary considerations 8 Ecological considerations 9 Key to leaf types at Rose Creek 10 Systematics 12 Magnoliales 12 Laurales 13 cf. Illiciales 30 Magnoliidae order -
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Gardens’ Bulletin Singapore 64(1): 221–256. 2012 221 The plant taxa of H.N. Ridley, 4. The primitive angiosperms (Austrobaileyales, Canellales, Chloranthales, Laurales, Magnoliales, Nymphaeales and Piperales) I.M. Turner Fairfield, Pett Level Road, Winchelsea Beach, East Sussex TN36 4ND, U.K. [email protected] ABSTRACT. The names of plant taxa authored by H.N. Ridley from the orders of primitive angiosperms are enumerated. A total of 157 taxa across 11 families (Annonaceae, Aristolochiaceae, Chloranthaceae, Illiciaceae, Lauraceae, Magnoliaceae, Monimiaceae, Nymphaeaceae, Piperaceae, Trimeniaceae and Winteraceae) and seven orders (Austrobaileyales, Canellales, Chloranthales, Laurales, Magnoliales, Nymphaeales and Piperales) are listed with synonyms and accepted names. The types are listed for those taxa that Ridley described. Lectotypes are designated for 37 taxa. Melodorum breviflorum Ridl. (Annonaceae) is transferred to Fissistigma, and two Ridley species in Piperaceae that are later homonyms are provided with new names: Peperomia kerinciensis I.M.Turner for Peperomia villosa Ridl. (1917, nom. illegit. non P. villosa C.DC. (1866)) and Piper angsiense I.M.Turner for Piper venosum Ridl. (1925, nom. illegit. non P. venosum (Miq.) C.DC. (1869)). Keywords. Austrobaileyales, Canellales, Chloranthales, Laurales, Magnoliales, Nymphaeales, Piperales, primitive angiosperms, Ridley Introduction This paper continues an intermittent series on the plant taxa named by Henry Nicholas Ridley (1855–1956). The three parts published to date (Turner & Chin 1998a, b; Turner 2000), dealt with the pteridophytes, gymnosperms and Zingiberales, respectively. The focus shifts to the primitive angiosperms in the current paper. Ridley described many plant species. Among the primitive angiosperm orders there are numerous examples which are enumerated in this paper. -
2 ANGIOSPERM PHYLOGENY GROUP (APG) SYSTEM History Of
ANGIOSPERM PHYLOGENY GROUP (APG) SYSTEM The Angiosperm Phylogeny Group, or APG, refers to an informal international group of systematic botanists who came together to try to establish a consensus view of the taxonomy of flowering plants (angiosperms) that would reflect new knowledge about their relationships based upon phylogenetic studies. As of 2010, three incremental versions of a classification system have resulted from this collaboration (published in 1998, 2003 and 2009). An important motivation for the group was what they viewed as deficiencies in prior angiosperm classifications, which were not based on monophyletic groups (i.e. groups consisting of all the descendants of a common ancestor). APG publications are increasingly influential, with a number of major herbaria changing the arrangement of their collections to match the latest APG system. Angiosperm classification and the APG Until detailed genetic evidence became available, the classification of flowering plants (also known as angiosperms, Angiospermae, Anthophyta or Magnoliophyta) was based on their morphology (particularly that of the flower) and their biochemistry (what kinds of chemical compound they contained or produced). Classification systems were typically produced by an individual botanist or by a small group. The result was a large number of such systems (see List of systems of plant taxonomy). Different systems and their updates tended to be favoured in different countries; e.g. the Engler system in continental Europe; the Bentham & Hooker system in Britain (particularly influential because it was used by Kew); the Takhtajan system in the former Soviet Union and countries within its sphere of influence; and the Cronquist system in the United States. -
Magnoliophyta - Angiosperms Survey of Angiosperms — Using APG System
Magnoliophyta - Angiosperms Survey of Angiosperms — using APG system ‘Basal angiosperms’ • ANA (‘basal families’) • magnoliid complex • monocots Eudicots or tricolpates (3 pored pollen) • ranunculids • caryophyllids • rosids • asterids Basal Angiosperms We will begin our survey of angiosperms by examining the ‘basal angiosperms’ - those groups that are now shown to be the first diverging – paraphyletic! These include all those shown here except the eudicots which are the bulk of dicots We will look at the monocots - a ‘basal angiosperm group’ - at the end of the semester Basal Angiosperms What are basal angiosperms? (1) Charles Bessey’s order Ranales with most of the dicot basal angiosperms and (2) monocots Magnolia = primitive polypetaly hypogyny actinomorphic Basal Angiosperms What are basal angiosperms? Exhibit a suite of primitive character states 1. Many parts at each whorl Basal Angiosperms What are basal angiosperms? Exhibit a suite of primitive character states 1. Many parts at each whorl 2. Separate, unsealed carpels Drimys Winteraceae Basal Angiosperms What are basal angiosperms? Exhibit a suite of primitive character states 1. Many parts at each whorl 2. Separate, unsealed carpels 3. Follicle fruits Leaf-like follicles Basal Angiosperms What are basal angiosperms? Exhibit a suite of primitive character states 1. Many parts at each whorl 2. Separate, unsealed carpels 3. Follicle fruits 4. Laminar stamens Laminar stamens in yellow waterlily Basal Angiosperms What are basal angiosperms? Exhibit a suite of primitive character states 1. Many parts at each whorl 2. Separate, unsealed carpels 3. Follicle fruits 4. Laminar stamens 5. Tracheids, no vessel elements Basal Angiosperms What are basal angiosperms? Lilium (monocot) uniaperturate Exhibit a suite of primitive character states 1. -
584 *Monocots, Basal Angiosperms, Chloranthales, Magnoliids
584 584 584 *Monocots, basal angiosperms, Chloranthales, magnoliids Subdivisions are added for monocots, basal angiosperms, Chloranthales, magnoliids together; for monocots alone See Manual at 583–585 vs. 600; also at 583–584 .2 *Basal angiosperms, Chloranthales, magnoliids Standard subdivisions are added for basal angiosperms, Chloranthales, magnoliids together; for basal angiosperms alone .22 *Amborellales Class here Amborellaceae .23 *Nymphaeales Including Cabombaceae, Hydatellaceae, Nymphaeaceae Including water lilies .24 *Austrobaileyales Including Austrobaileyaceae, Schisandraceae, Trimeniaceae Including magnolia vine, star anise .26 *Chloranthales Class here Chloranthaceae .28 *Magnoliids .282 *Canellales Including Canellaceae, Winteraceae Including wild cinnamon, winter’s barks .284 *Piperales Including Aristolochiaceae, Hydnoraceae, Saururaceae Including birthwort, black pepper, lizard’s-tails, peperomias Class here Piperaceae Class here peppers Class comprehensive works on peppers in 583.9593 .286 *Magnoliales Including Annonaceae, Magnoliaceae, Myristicaceae Including cherimoya, cucumber tree, custard apples, lancewoods, mace, magnolias, michelias, nutmegs, papaws, tulip tree, yellow poplar See also 583.78 for papaws of family Caricaceae * *Add as instructed under 583–588 1 584 Dewey Decimal Classification 584 .288 *Laurales Including Atherospermataceae, Calycanthaceae, Hernandiaceae, Monimiaceae, Siparunaceae Including avocados, bay laurel, California laurel, cinnamon, Oregon myrtle, sassafras, sweet bay; comprehensive works -
Ancestral Traits and Specializations in the Flowers of the Basal Grade of Living Angiosperms
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2015 Ancestral traits and specializations in the flowers of the basal grade of living angiosperms Endress, Peter K ; Doyle, James A DOI: https://doi.org/10.12705/646.1 Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-119333 Journal Article Published Version Originally published at: Endress, Peter K; Doyle, James A (2015). Ancestral traits and specializations in the flowers of the basal grade of living angiosperms. Taxon, 64(6):1093-1116. DOI: https://doi.org/10.12705/646.1 TAXON 64 (6) • December 2015: 1093–1116 Endress & Doyle • Flowers of basal living angiosperms REVIEW Ancestral traits and specializations in the flowers of the basal grade of living angiosperms Peter K. Endress1 & James A. Doyle2 1 Department of Systematic Botany, University of Zurich, Zollikerstrasse 107, 8008 Zurich, Switzerland 2 Department of Evolution and Ecology, University of California, Davis, California 95616, U.S.A. Author for correspondence: Peter K. Endress, [email protected] ORCID: PKE, http://orcid.org/000166228196; JAD, http://orcid.org/000240838786 DOI http://dx.doi.org/10.12705/646.1 Abstract New morphological and phylogenetic data prompt us to present an updated review of floral morphology and its evolution in the basal ANITA grade of living angiosperms, Chloranthaceae, and Ceratophyllum. Floral phyllotaxis is complex whorled in Nymphaeales and spiral in Amborella and Austrobaileyales. It is unresolved whether phyllotaxis was ancestrally whorled or spiral, but if it was whorled, the whorls were trimerous. -
Free-Sample-Pages.Pdf
Published by Plant Gateway Ltd., Hertford, SG13 7BX, United Kingdom © Plant Gateway 2014 This book is in copyright. Subject to statutory exception and to the provision of relevant col- lective licensing agreements, no reproduction of any part may take place without the written permission of Plant Gateway Ltd. ISBN 978-0-9929993-0-8 eISBN 978-0-9929993-1-5 Plant Gateway Ltd. has no responsibility for the persistence or accuracy of URLS for external or third-party internet websites referred to in this book, and does not guarantee that any content on such websites is, or will remain, accurate or appropriate. Additional information on the book can be found at: www.plantgateway.com An appropriate citation for this eBook is: Byng JW. 2014. The Flowering Plants Handbook: A practical guide to families and genera of the world. Plant Gateway Ltd., Hertford, UK. eBook available from: www.plantgateway.com From the war of nature, from famine and death, the most exalted object which we are capable of conceiving, namely, the production of the higher animals, directly follows. There is grandeur in this view of life, with its several powers, having been originally breathed into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being, evolved. Charles Darwin On The Origin of Species (1859) CONTENTS The Flowering Plants Handbook A practical guide to families and genera of the world James W. Byng eBook version CONTENTS DEDICATION This work is a dwarf standing on the shoulders of giants and is dedicated to the many botanists, both past and present, for the huge body of knowledge that exists today. -
Angiosperm Phylogeny Group (APG) System
Angiosperm Phylogeny Group (APG) system The Angiosperm Phylogeny Group, or APG, refers to an informal international group of systematic botanists who came together to try to establish a consensus view of the taxonomy of flowering plants (angiosperms) that would reflect new knowledge about their relationships based upon phylogenetic studies. As of 2010, three incremental versions of a classification system have resulted from this collaboration (published in 1998, 2003 and 2009). An important motivation for the group was what they viewed as deficiencies in prior angiosperm classifications, which were not based on monophyletic groups (i.e. groups consisting of all the descendants of a common ancestor). APG publications are increasingly influential, with a number of major herbaria changing the arrangement of their collections to match the latest APG system. Angiosperm classification and the APG Until detailed genetic evidence became available, the classification of flowering plants (also known as angiosperms, Angiospermae , Anthophyta or Magnoliophyta ) was based on their morphology (particularly that of the flower) and their biochemistry (what kinds of chemical compound they contained or produced). Classification systems were typically produced by an individual botanist or by a small group. The result was a large number of such systems (see List of systems of plant taxonomy). Different systems and their updates tended to be favoured in different countries; e.g. the Engler system in continental Europe; the Bentham & Hooker system in Britain (particularly influential because it was used by Kew); the Takhtajan system in the former Soviet Union and countries within its sphere of influence; and the Cronquist system in the United States. -
Phylogenetic Analysis of Magnoliales and Myristicaceae Based on Multiple Data Sets: Implications for Character Evolution
Blackwell Science, LtdOxford, UKBOJBotanical Journal of the Linnean Society0024-4074The Linnean Society of London, 2003? 2003 1422 125186 Original Article PHYLOGENETICS OF MAGNOLIALES H. SAUQUET ET AL Botanical Journal of the Linnean Society, 2003, 142, 125–186. With 14 figures Phylogenetic analysis of Magnoliales and Myristicaceae based on multiple data sets: implications for character evolution HERVÉ SAUQUET1*, JAMES A. DOYLE2, TANYA SCHARASCHKIN2, THOMAS BORSCH3, KHIDIR W. HILU4, LARS W. CHATROU5 and ANNICK LE THOMAS1 1Laboratoire de Biologie et Évolution des Plantes vasculaires EPHE, Muséum national d’Histoire naturelle, 16, rue Buffon, 75005 Paris, France 2Section of Evolution and Ecology, University of California, Davis, CA 95616, USA 3Abteilung Systematik und Biodiversität, Botanisches Institut und Botanischer Garten, Friedrich- Wilhelms-Universität Bonn, Meckenheimer Allee 170, 53115 Bonn, Germany 4Department of Biology, Virginia Tech, Blacksburg, VA 24061, USA 5National Herbarium of the Netherlands, Utrecht University branch, Heidelberglaan 2, 3584 CS Utrecht, The Netherlands Received September 2002; accepted for publication January 2003 Magnoliales, consisting of six families of tropical to warm-temperate woody angiosperms, were long considered the most archaic order of flowering plants, but molecular analyses nest them among other eumagnoliids. Based on sep- arate and combined analyses of a morphological matrix (115 characters) and multiple molecular data sets (seven variable chloroplast loci and five more conserved genes; 14 536 aligned nucleotides), phylogenetic relationships were investigated simultaneously within Magnoliales and Myristicaceae, using Laurales, Winterales, and Piperales as outgroups. Despite apparent conflicts among data sets, parsimony and maximum likelihood analyses of combined data converged towards a fully resolved and well-supported topology, consistent with higher-level molecular analyses except for the position of Magnoliaceae: Myristicaceae + (Magnoliaceae + ((Degeneria + Galbulimima) + (Eupomatia + Annonaceae))). -
Evidence from Mitochondrial, Plastid and Nuclear Genomes
letters to nature Product pro®le 120, glutamate 524, and tyrosine 355 in the binding of arachidonate and 2-phenylpropionic acid inhibitors to the cyclooxygenase active site of ovine prostaglandin endoperoxide H synthase-1. J. Biol. Assays were performed on puri®ed wild-type and Trp387Phe variant murine COX-2 Chem. 271, 2179±2184 (1996). protein. Protein samples (750 nM) in 190 ml Tris-HCl buffer (100 mM, pH 8.0; 500 mM 20. Rieke, C. J., Mulichak, A. M., Garavito, R. M. & Smith, W. L. The role of arginine 120 of human phenol at 37 8C) were treated with 100 mM [1-14C]arachidonic acid (in 10 ml ethanol) for prostaglandin endoperoxide H synthase- 2 in the interaction with fatty acid substrates and inhibitors. either 10 min or 1 h at 25 8C. Incubations were terminated by addition of 400 ml stop J. Biol. Chem. 274, 17109±17114 (1999). solution (80.6 ml ether, 11.4 ml methanol, 2.8 ml 1 M citric acid) after 1±3 h. The organic 21. Rowlinson, S. W., Crews, B. C., Lanzo, C. A. & Marnett, L. J. The binding of arachidonic acid in the phase was removed and dried under nitrogen. Samples were then purged with argon and cyclooxygenase active site of mouse prostaglandin endoperoxide synthase-2 (COX-2): a putative L- stored at -20 8C. To determine the products synthesized in the test samples, 5-, 11-, 12- shaped binding conformation utilizing the top channel region. J. Biol. Chem. 274, 23305±23310 and 15-HETE standard elution pro®les were obtained. 1.6 mg of each standard was (1999).