Microbial Diversity in the Floral Nectar of Seven Epipactis
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Die Gattung Epipactis Und Ihre Systematische Stellung Innnerhalb Der Unterfamilie Neottioideae, Im Lichte Enhvickiungsgeschichtli- Eher Untersuchungen
Jber. natnrwiss. Ver Wuppertal 51 43 - 100 Wuppertal, 15.9.1998 Die Gattung Epipactis und ihre systematische Stellung innnerhalb der Unterfamilie Neottioideae, im Lichte enhvickiungsgeschichtli- eher Untersuchungen. Kar1 Robatsch Mit Zeichnungen von L. FREIDINGER und C. A. MRKVICKA Zusammenfassung: Die systematische Stellung der Gattung Epipactis in der Subtribus Cephalantherinae wie auch die Stel- lung dieser Subtribus innerhalb der Unterfamilie Neottioideae wird an Beispielen enhvickungsgeschicht- licher Untersuchungen diskutiert. Nach den neuesten molekularen Daten, die aus DNA-Sequenzanalysen gewonnen wurden, ist ein Stammbaum erstellt worden, in dem die Neottioideae in die "epidendroids" eingereiht wurden. Das steht im Widerspruch zu dem in unserer Arbeit praktizierten Klassifikations- System, das in "Die Orcliideen" R. SCHLECHTER in der Bearbeitung von F. BMEGER und K. SENGHAS venvendet wird. Die Ableitung einer Orchideenblüte aus dem Liliiflorae-Erbe ermögliclit eine Differentialdiagnose zwi- schen den Orchidaceae und den Apostasiaceae. Die Apostasiaceae, die viele Autoren als Unterfamilie Apostasioideae zu den Orchidaceae stellen, werden durch vergleichende Blütenanalysen von dieser Familie abgetrennt. Der Entwickiungstendenz des Gynoeceums der Orchideen, durch die es zum Auf- bau eines Rostellums mit seinen Organen kommt, steht die Reduktionstendenz des Gynoeceums der Apostasiaceae, durch die es zu einer Verminderung des ursprünglich trimeren Stigmas kommt, gegen- über. Die Autogamie der Gattung Epipactis (Sektion Epipactis) -
Phytogeographical Analysis and Ecological Factors of the Distribution of Orchidaceae Taxa in the Western Carpathians (Local Study)
plants Article Phytogeographical Analysis and Ecological Factors of the Distribution of Orchidaceae Taxa in the Western Carpathians (Local study) Lukáš Wittlinger and Lucia Petrikoviˇcová * Department of Geography and Regional Development, Faculty of Natural Sciences, Constantine the Philosopher University in Nitra, 94974 Nitra, Slovakia; [email protected] * Correspondence: [email protected]; Tel.: +421-907-3441-04 Abstract: In the years 2018–2020, we carried out large-scale mapping in the Western Carpathians with a focus on determining the biodiversity of taxa of the family Orchidaceae using field biogeographical research. We evaluated the research using phytogeographic analysis with an emphasis on selected ecological environmental factors (substrate: ecological land unit value, soil reaction (pH), terrain: slope (◦), flow and hydrogeological productivity (m2.s−1) and average annual amounts of global radiation (kWh.m–2). A total of 19 species were found in the area, of which the majority were Cephalenthera longifolia, Cephalenthera damasonium and Anacamptis morio. Rare findings included Epipactis muelleri, Epipactis leptochila and Limodorum abortivum. We determined the ecological demands of the abiotic environment of individual species by means of a functional analysis of communities. The research confirmed that most of the orchids that were studied occurred in acidified, calcified and basophil locations. From the location of the distribution of individual populations, it is clear that they are generally arranged compactly and occasionally scattered, which results in ecological and environmental diversity. During the research, we identified 129 localities with the occurrence of Citation: Wittlinger, L.; Petrikoviˇcová, L. Phytogeographical Analysis and 19 species and subspecies of orchids. We identify the main factors that threaten them and propose Ecological Factors of the Distribution specific measures to protect vulnerable populations. -
Acinetobacter Pollinis Sp
TAXONOMIC DESCRIPTION Alvarez- Perez et al., Int. J. Syst. Evol. Microbiol. 2021;71:004783 DOI 10.1099/ijsem.0.004783 Acinetobacter pollinis sp. nov., Acinetobacter baretiae sp. nov. and Acinetobacter rathckeae sp. nov., isolated from floral nectar and honey bees Sergio Alvarez- Perez1,2†, Lydia J. Baker3†, Megan M. Morris4, Kaoru Tsuji5, Vivianna A. Sanchez3, Tadashi Fukami6, Rachel L. Vannette7, Bart Lievens1 and Tory A. Hendry3,* Abstract A detailed evaluation of eight bacterial isolates from floral nectar and animal visitors to flowers shows evidence that they rep- resent three novel species in the genus Acinetobacter. Phylogenomic analysis shows the closest relatives of these new isolates are Acinetobacter apis, Acinetobacter boissieri and Acinetobacter nectaris, previously described species associated with floral nectar and bees, but high genome- wide sequence divergence defines these isolates as novel species. Pairwise comparisons of the average nucleotide identity of the new isolates compared to known species is extremely low (<83 %), thus confirming that these samples are representative of three novel Acinetobacter species, for which the names Acinetobacter pollinis sp. nov., Aci- netobacter baretiae sp. nov. and Acinetobacter rathckeae sp. nov. are proposed. The respective type strains are SCC477T (=TSD- 214T=LMG 31655T), B10AT (=TSD-213T=LMG 31702T) and EC24T (=TSD-215T=LMG 31703T=DSM 111781T). The genus Acinetobacter (Gammaproteobacteria) is a physi- gene trees, but was nevertheless identified and described as ologically and metabolically diverse group of bacteria cur- a new species with the name Acinetobacter apis. However, rently including 65 validly published and correct names, plus several other tentative designations and effectively but not the diversity of acinetobacters associated with flowering validly published species names (https:// lpsn. -
Microbial Abundance, Composition, and Function in Nectar Are Shaped by Flower Visitor Identity Megan M
FEMS Microbiology Ecology, 96, 2020, fiaa003 doi: 10.1093/femsec/fiaa003 Advance Access Publication Date: 10 January 2020 Research Article Downloaded from https://academic.oup.com/femsec/article-abstract/96/3/fiaa003/5700281 by University of California, Davis user on 16 June 2020 RESEARCH ARTICLE Microbial abundance, composition, and function in nectar are shaped by flower visitor identity Megan M. Morris1,2,3,†, Natalie J. Frixione1, Alexander C. Burkert2, Elizabeth A. Dinsdale1 and Rachel L. Vannette2,* 1Department of Biology, San Diego State University, San Diego, CA 92182, USA, 2Department of Entomology and Nematology, University of California, Davis, Davis, CA 95616, USA and 3Department of Biology, Stanford University, Stanford, CA 94305, USA ∗Corresponding author: 366 Briggs Hall, University of California Davis, Davis CA 95616. Tel: +1-530-752-3379; E-mail: [email protected] One sentence summary: This study uses a floral nectar model system to show that vector identity, in this case legitimate floral pollinators versus nectar robbers, determines microbial assembly and function. Editor: Paolina Garbeva †Megan M. Morris, http://orcid.org/0000-0002-7024-8234 ABSTRACT Microbial dispersal is essential for establishment in new habitats, but the role of vector identity is poorly understood in community assembly and function. Here, we compared microbial assembly and function in floral nectar visited by legitimate pollinators (hummingbirds) and nectar robbers (carpenter bees). We assessed effects of visitation on the abundance and composition of culturable bacteria and fungi and their taxonomy and function using shotgun metagenomics and nectar chemistry. We also compared metagenome-assembled genomes (MAGs) of Acinetobacter, a common and highly abundant nectar bacterium, among visitor treatments. -
652 Twelve Species and Subspecies of the Genus Epipactis Were Known
V.V. FATERYGA1, C.A.J. KREUTZ2, A.V. FATERYGA1,3, J. REINHARDT4 1 Karadag Nature Reserve, National Academy of Sciences of Ukraine 24, Nauki Str., Kurortnoye, Feodosiya, 98188, Ukraine [email protected] 2 Naturalis Biodiversity Center, Biosystematics group, Wageningen University 37, Generaal Foulkesweg, Wageningen, NL-6703 BL, the Netherlands [email protected] 3 V.I. Vernadsky Taurida National University 4, Academician Vernadsky Ave., Simferopol, 95007, Ukraine [email protected] 4 16, Markt, Bad Tennstedt, D-99955, Germany [email protected] EPIPACTIS MUELLERI GODFERY (ORCHIDACEAE), A NEW SPECIES FOR THE FLORA OF UKRAINE K e y w o r d s: Epipactis, flora, Ukraine, Crimea Abstract has been the only obligate self-pollinated Epipactis A self-pollinated orchid, Epipactis muelleri Godfery, is reported known in Ukraine (Carpathians Region) until now [7], from the Crimea as a new species for the flora of Ukraine. Data on and we succeeded in finding another such species in the key diagnostic characters of the species and collected herbarium Crimea. The species has been identified as E. muelleri specimens are provided. Godfery. Twelve species and subspecies of the genus Epipactis Herbarium specimens of the discovered species are were known in Ukraine until recently: E. palustris (L.) deposited at the National Herbarium of Ukraine, Kiev Crantz from sect. Arthrochilium Irmisch, ser. Palustres (KW), the Herbarium of National University of Life Nevski ex Efimov; E. atrorubens (Hoffm.) Besser and and Environmental Sciences of Ukraine, Southern E. microphylla (Ehrh.) Sw. from sect. Epipactis, ser. Branch «Crimean Agrotechnological University», Atrorubentae Nevski ex Efimov; and E. condensata Boiss. -
Exploration of Bacteria Associated with Anopheles Mosquitoes Around the World
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1691 Exploration of bacteria associated with Anopheles mosquitoes around the world For the prevention of transmission of malaria LOUISE K. J. NILSSON ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-513-0381-9 UPPSALA urn:nbn:se:uu:diva-352547 2018 Dissertation presented at Uppsala University to be publicly examined in A1:111a, BMC, Husargatan 3, Uppsala, Friday, 14 September 2018 at 09:15 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Professor Michael Strand (Department of Entomology, University of Georgia). Abstract Nilsson, L. K. J. 2018. Exploration of bacteria associated with Anopheles mosquitoes around the world. For the prevention of transmission of malaria. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1691. 54 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-513-0381-9. Every year, hundreds of thousands of people die from malaria. Malaria is a disease caused by parasites, which are spread by female vector mosquitoes of the genus Anopheles. Current control measures against malaria are based on drugs against the parasites and vector control using insecticides. A problem with these measures is the development of resistance, both in the parasites against the drugs and the mosquitoes against the insecticides. Therefore, additional areas of malaria control must be explored. One such area involves the bacteria associated with the vector mosquitoes. Bacteria have been shown to affect mosquitoes at all life stages, e.g. by affecting choice of oviposition site by female mosquitoes, development of larvae and susceptibility to parasite infection in adults. -
Distribution and Conservation Status of Some Rare and Threatened Orchid
Wulfenia 24 (2017): 143 –162 Mitteilungen des Kärntner Botanikzentrums Klagenfurt Distribution and conservation status of some rare and threatened orchid taxa in the central Balkans and the southern part of the Pannonian Plain Vladan Djordjević, Dmitar Lakušić, Slobodan Jovanović & Vladimir Stevanović Summary: Along with being a centre of plant species diversity and endemism, the Balkan Peninsula is one of the parts of Europe with the highest number of orchid taxa. However, the orchid flora in the central Balkans has not been sufficiently studied. The paper presents the distribution of ten rare and threatened taxa of Orchidaceae in the central Balkans and the southern part of the Pannonian Plain: Anacamptis papilionacea, Epipactis palustris, E. purpurata, Epipogium aphyllum, Goodyera repens, Gymnadenia frivaldii, Ophrys apifera, O. insectifera, Orchis militaris and O. spitzelii subsp. spitzelii. In addition to field investigation, checking and revision of herbarium material, literature sources were also used for supplementing distribution data. The distribution maps of these taxa in the central Balkans (Serbia and Kosovo region) and the southern part of the Pannonian Plain (Vojvodina) are created on a 10 km × 10 km UTM grid system. Data concerning their habitat preferences, population size and the estimated IUCN conservation status in the study area are provided. Keywords: Orchidaceae, phytogeography, IUCN conservation status, Balkan Peninsula The orchid family is one of the largest and most diverse families in the plant kingdom with estimates of about 28 000 species distributed in about 763 genera (Chase et al. 2015; Christenhusz & Byng 2016). According to Hágsater & Dumont (1996), over 300 orchid species occur in Europe, North Africa and Near East. -
Microbial Diversity in the Floral Nectar of Linaria Vulgaris Along an Urbanization Gradient Jacek Bartlewicz1* , Bart Lievens2, Olivier Honnay1 and Hans Jacquemyn1
Bartlewicz et al. BMC Ecol (2016) 16:18 DOI 10.1186/s12898-016-0072-1 BMC Ecology RESEARCH ARTICLE Open Access Microbial diversity in the floral nectar of Linaria vulgaris along an urbanization gradient Jacek Bartlewicz1* , Bart Lievens2, Olivier Honnay1 and Hans Jacquemyn1 Abstract Background: Microbes are common inhabitants of floral nectar and are capable of influencing plant-pollinator interactions. All studies so far investigated microbial communities in floral nectar in plant populations that were located in natural environments, but nothing is known about these communities in nectar of plants inhabiting urban environments. However, at least some microbes are vectored into floral nectar by pollinators, and because urbaniza- tion can have a profound impact on pollinator communities and plant-pollinator interactions, it can be expected that it affects nectar microbes as well. To test this hypothesis, we related microbial diversity in floral nectar to the degree of urbanization in the late-flowering plant Linaria vulgaris. Floral nectar was collected from twenty populations along an urbanization gradient and culturable bacteria and yeasts were isolated and identified by partially sequencing the genes coding for small and large ribosome subunits, respectively. Results: A total of seven yeast and 13 bacterial operational taxonomic units (OTUs) were found at 3 and 1 % sequence dissimilarity cut-offs, respectively. In agreement with previous studies, Metschnikowia reukaufii and M. gruessi were the main yeast constituents of nectar yeast communities, whereas Acinetobacter nectaris and Rosenbergiella epipactidis were the most frequently found bacterial species. Microbial incidence was high and did not change along the investigated urbanization gradient. However, microbial communities showed a nested subset structure, indicating that species-poor communities were a subset of species-rich communities. -
Isolation of Potential New Biocontrol Strains from the Blossom of Malus
Research Paper iMedPub Journals European Journal of Experimental Biology 2020 www.imedpub.com ISSN 2248-9215 Vol. 10 No. 6:117 Isolation of potential new biocontrol strains Elie Khoury1, Antoine abou fayad2,3,4, from the blossom of Malus trilobata against Dolla Karam Sarkis5, 1* the fire blight pathogen Erwinia amylovora Mireille kallassy awad 1 Biotechnology Laboratory, UR EGP, Saint- Abstract Joseph University, B.P. 11-514 Riad El Background: Fire blight is a contagious disease that affects members of the Rosaceae Solh Beirut1107 2050, Lebanon family, caused by the bacteria Erwinia amylovora, which invades apple trees via their blossom. 2 Department of Experimental Pathology, Methods: In this study, using culture dependent methods, we isolated for the first time the Immunology and Microbiology, American microorganisms colonizing the blossom of the wild apple tree, Malus trilobata, in Lebanon. University of Beirut, Beirut, Lebanon A total of 94 strains from the blossoms of trees originating from two regions, Ain Zhalta reserve and Dhour EL Choueir, were isolated. Genetic analysis of the strains revealed a wide 3 Center for Infectious Diseases Research and interesting variety of microorganisms quite different from those isolated from Malus domestica blossom. Direct and indirect inhibition assays of the isolates against E. amylovora (CIDR), American University of Beirut. were conducted. Findings: While some strains belong to species known for their antibacterial activity, 4 WHO Collaborating Center for Reference two new strains with interesting inhibitory activity against E. amylovora, have not been and Research on Bacterial Pathogens, previously described. The first strain is a fungi, Saccothecium sp., inhibiting E. amylovora American University of Beirut growth due to antimicrobial metabolite production and nutrient competition. -
Dottorato Di Ricerca
Università degli Studi di Cagliari DOTTORATO DI RICERCA IN SCIENZE E TECNOLOGIE DELLA TERRA E DELL'AMBIENTE Ciclo XXXI Patterns of reproductive isolation in Sardinian orchids of the subtribe Orchidinae Settore scientifico disciplinare di afferenza Botanica ambientale e applicata, BIO/03 Presentata da: Dott. Michele Lussu Coordinatore Dottorato Prof. Aldo Muntoni Tutor Dott.ssa Michela Marignani Co-tutor Prof.ssa Annalena Cogoni Dott. Pierluigi Cortis Esame finale anno accademico 2018 – 2019 Tesi discussa nella sessione d’esame Febbraio –Aprile 2019 2 Table of contents Chapter 1 Abstract Riassunto………………………………………………………………………………………….. 4 Preface ………………………………………………………………………………………………………. 6 Chapter 2 Introduction …………………………………………………………………………………………………. 8 Aim of the study…………………………………………………………………………………………….. 14 Chapter 3 What we didn‘t know, we know and why is important working on island's orchids. A synopsis of Sardinian studies……………………………………………………………………………………………………….. 17 Chapter 4 Ophrys annae and Ophrys chestermanii: an impossible love between two orchid sister species…………. 111 Chapter 5 Does size really matter? A comparative study on floral traits in two different orchid's pollination strategies……………………………………………………………………………………………………. 133 Chapter 6 General conclusions………………………………………………………………………………………... 156 3 Chapter 1 Abstract Orchids are globally well known for their highly specialized mechanisms of pollination as a result of their complex biology. Based on natural selection, mutation and genetic drift, speciation occurs simultaneously in organisms linking them in complexes webs called ecosystems. Clarify what a species is, it is the first step to understand the biology of orchids and start protection actions especially in a fast changing world due to human impact such as habitats fragmentation and climate changes. I use the biological species concept (BSC) to investigate the presence and eventually the strength of mechanisms that limit the gene flow between close related taxa. -
The Epipactis Helleborine Group (Orchidaceae): an Overview of Recent Taxonomic Changes, with an Updated List of Currently Accepted Taxa
plants Review The Epipactis helleborine Group (Orchidaceae): An Overview of Recent Taxonomic Changes, with an Updated List of Currently Accepted Taxa Zbigniew Łobas 1,* , Anatoliy Khapugin 2,3 , Elzbieta˙ Zołubak˙ 1 and Anna Jakubska-Busse 1,* 1 Department of Botany, Faculty of Biological Sciences, University of Wroclaw, 50-328 Wroclaw, Poland; [email protected] 2 Institute of Environmental and Agricultural Biology (X-BIO), Tyumen State University, 625003 Tyumen, Russia; [email protected] 3 Joint Directorate of the Mordovia State Nature Reserve and National Park “Smolny”, 430005 Saransk, Russia * Correspondence: [email protected] (Z.Ł.); [email protected] (A.J.-B.) Abstract: The Epipactis helleborine (L.) Crantz group is one of the most taxonomically challenging species complexes within the genus Epipactis. Because of the exceptionally high levels of morpho- logical variability and the ability to readily cross with other species, ninety different taxa at various taxonomic ranks have already been described within its nominative subspecies, but the taxonomic status of most of them is uncertain, widely disputed, and sometimes even irrelevant. The present review is based on results of the most recent research devoted to the E. helleborine group taxonomy. In addition, we analysed data about taxa belonging to this group presented in some research articles and monographs devoted directly to the genus Epipactis or to orchids in certain area(s). Based on the reviewed literature and data collected in four taxonomic databases Available Online, we propose an Citation: Łobas, Z.; Khapugin, A.; updated list of the 10 currently accepted taxa in the E. -
Acinetobacter Cumulans Sp. Nov., Isolated from Hospital Sewage And
Systematic and Applied Microbiology 42 (2019) 319–325 Contents lists available at ScienceDirect Systematic and Applied Microbiology jou rnal homepage: http://www.elsevier.com/locate/syapm Acinetobacter cumulans sp. nov., isolated from hospital sewage and ଝ capable of acquisition of multiple antibiotic resistance genes a,b,c d d a,b,c e,f Jiayuan Qin , Martina Maixnerová , Matejˇ Nemec , Yu Feng , Xinzhuo Zhang , d,g,∗ a,b,c,∗∗ Alexandr Nemec , Zhiyong Zong a Center of Infectious Diseases, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu 610041, Sichuan, China b Division of Infectious Diseases, State Key Laboratory of Biotherapy, Guoxuexiang 37, Chengdu 610041, Sichuan, China c Center for Pathogen Research, West China Hospital, Sichuan University, Guoxuexiang 37, Chengdu 610041, Sichuan, China d Laboratory of Bacterial Genetics, Centre for Epidemiology and Microbiology, National Institute of Public Health, Srobárovaˇ 48, 100 42 Prague 10, Czech Republic e School of International Education, Southwest Medical University, No. 1 Xianglin Road, Luzhou 646000, Sichuan, China f Department of Pathogenic Biology, School of Basic Medicine, Southwest Medical University, No. 1 Xianglin Road, Luzhou 646000, Sichuan, China g Department of Laboratory Medicine, Third Faculty of Medicine, Charles University, Srobárovaˇ 50, 100 34 Prague 10, Czech Republic a r t i c l e i n f o a b s t r a c t Article history: We studied the taxonomic position of six phenetically related strains of the genus Acinetobacter, which Received 21 November 2018 were recovered from hospital sewage in China and showed different patterns of resistance to clinically Received in revised form 3 February 2019 important antibiotics.