Congratulations to Professor Albert Eschenmoser on His 85Th Birthday
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Significance and Implications of Vitamin B-12 Reaction Shema- ETH ZURICH VARIANT: Mechanisms and Insights
Taylor University Pillars at Taylor University Student Scholarship: Chemistry Chemistry and Biochemistry Fall 2019 Significance and Implications of Vitamin B-12 Reaction Shema- ETH ZURICH VARIANT: Mechanisms and Insights David Joshua Ferguson Follow this and additional works at: https://pillars.taylor.edu/chemistry-student Part of the Analytical Chemistry Commons, Inorganic Chemistry Commons, Organic Chemistry Commons, Other Chemistry Commons, and the Physical Chemistry Commons CHEMISTRY THESIS SIGNIFICANCE AND IMPLICATIONS OF VITAMIN B-12 REACTION SCHEMA- ETH ZURICH VARIANT: MECHANISMS AND INSIGHTS DAVID JOSHUA FERGUSON 2019 2 Table of Contents: Chapter 1 6 Chapter 2 17 Chapter 3 40 Chapter 4 59 Chapter 5 82 Chapter 6 118 Chapter 7 122 Appendix References 3 Chapter 1 A. INTRODUCTION. Vitamin B-12 otherwise known as cyanocobalamin is a compound with synthetic elegance. Considering how it is composed of an aromatic macrocyclic corrin there are key features of this molecule that are observed either in its synthesis of in the biochemical reactions it plays a role in whether they be isomerization reactions or transfer reactions. In this paper the focus for the discussion will be on the history, chemical significance and total synthesis of vitamin B12. Even more so the paper will be concentrated one of the two variants of the vitamin B-12 synthesis, namely the ETH Zurich variant spearheaded by Albert Eschenmoser.Examining the structure as a whole it is observed that a large portion of the vitamin B12 is a corrin structure with a cobalt ion in the center of the macrocyclic part, and that same cobalt ion has cyanide ligands. -
3.1.4 Droplet-Based Microfluidics
Rodriguez Garcia, Marc (2016) Engineering the transition from non-living to living matter. PhD thesis. https://theses.gla.ac.uk/7605/ Copyright and moral rights for this work are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This work cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Enlighten: Theses https://theses.gla.ac.uk/ [email protected] Engineering the transition from non-living to living matter Marc Rodríguez Garcia A thesis submitted to the University of Glasgow for the degree of Doctor of Philosophy School of Chemistry College of Science and Engineering August 2016 A tota la meva família, per haver-me ajudat a arribar fins aquí. Però sobretot als meus pares, per estar tant a prop malgrat la distància. I en especial a la Nuria, per ser el motiu que em fa tirar endavant. “The good thing about science is that it's true whether or not you believe in it.” -Neil deGrasse Tyson Acknowledgements 1 Acknowledgements This project was carried out between September 2012 and June 2016 in the group of Prof Leroy Cronin in the School of Chemistry at the University of Glasgow. I have received much help and support from many colleagues and friends. -
Searching for Nucleic Acid Alternatives
MODIFIED OLIGONUCLEOTIDES 836 CHIMIA 2005, 59, No. 11 Chimia 59 (2005) 836–850 © Schweizerische Chemische Gesellschaft ISSN 0009–4293 Searching for Nucleic Acid Alternatives Albert Eschenmoser* Abstract: “Back of the envelope” methods have their place in experimental chemical research; they are effective mediators in the generation of research ideas, for instance, the design of molecular structures. Their qualitative character is part of their strength, rather than a drawback for the role they have to play. Qualitative conformational analysis of oligonucleotide and other oligomer systems on the level of idealized conformations is one such method; it has played a helpful role in our work on the chemical etiology of nucleic acid structure. This article, while giving a short overview of that work, shows how. Keywords: Conformational analysis of oligonucleotides · Nucleic acid analogs · Oligonucleodipeptides · p-RNA · TNA · Watson-Crick base-pairing Chemists understand by comparing, not ‘ab structural or transformational complexity, we know today as the molecular basis of initio’. To perceive and to create opportuni- serve the purpose of creating opportunities genetic function. The specific property to ties for drawing conclusions on the basis of to compare the behavior of complex sys- be compared in this work is a given nucleic comparisons is the organic chemist’s way tems with that of simpler ones. Enzymic re- acid alternative’s capacity for informational of interpreting and exploring the world at actions and enzyme models are examples. -
Goessmann, Lindsey, Chamberlain, Peters, and Mcewen, Research Symposium
GOE SSMANNgazette A Publication of the Chemistry Department University of Massachusetts Amherst www.chem.umass.edu VOLUME 44 – SPRING 2015 INSIDE Alumni News ............................2 by David Adams Points of Pride ...........................4 Chemistry Loses a Dear Friend Lab Notes .................................5 Dissertation Seminars .............21 On April 14th one of the towering figures of the Chemistry Seminar Program ....................20 Department, Professor George R. Richason, Jr. passed away Senior Awards Dinner .............22 at Cooley Dickinson Hospital in Northampton. Alongside Degrees Awarded ...................22 Goessmann, Lindsey, Chamberlain, Peters, and McEwen, Research Symposium ..............23 George takes his place among the chemists who shaped Friends of Chemistry ...............26 and propelled the department to national and international Letter from Head ....................28 quality and recognition. In George’s case, he was part of EVENTS for 2015 the Chemistry Department for 82 of its 146 year history! His contributions to the department and the university Five College Seminar were profound, widespread, and legendary. In many Prof. Phil Baran Scripps Institute respects he truly was “Mr. UMass.” March 10, 2015 In the early 1930s, George, born in the Riverside Marvin Rausch Lectureship Prof. Karl Wieghardt section of Turner’s Falls on April 3, 1916, participated in Max-Planck-Institut-Mülheim basketball tournaments on the Amherst campus of the then April 9, 2015 Massachusetts Agricultural College (MAC). MAC became Senior Awards Dinner Massachusetts State College in 1931, and George April 29, 2015 matriculated at MSC in the fall of 1933. Early in his undergraduate career the basketball coach Getting to Know Our Newest Alumni Reunion 2015 June 6, 2015 encouraged him to join the State basketball team Faculty Members after watching him play in Curry Hicks Cage. -
Chemists Club Summer 2011
the chemists club Chemistry events the chemists club The calendar of named lectures for the Magazine. The Core’s editor, Laura Demanski, hopes that the drawing’s anonymous artist will 2011–12 academic year, as well as the Faculty kudos step forward. If you are the artist, or know who he or she might be, please drop Laura a line at most up-to-date information about the chemists club [email protected]. We all hope to solve this long-standing mystery. Department of Chemistry lectures and Jared Lewis has been named a 2011 Searle Scholar. The award, consist- Steven Sibener and Seth Darling, PhD’02, won first prize in the 2010 The Chemistry Department held a mini reunion at the Spring 2011 ACS meeting in Ana- events, can be found online at http:// ing of $300,000 over three years, is given to provide research support Science/NSF International Science and Engineering Visualization Summer 2011 heim. You can see a picture from this successful event below. Thanks to all who attended. If you event.uchicago.edu/chem/index.php. to outstanding young scientists who have recently started tenure-track Challenge. Their image—featured on the cover of the February 18Sci - couldn’t come this year, we hope to see you at our next open house, which will be held at the positions. ence—was captured with an atomic force microscope and shows waves Spring 2012 ACS meeting in San Diego. And next time you’re back in Hyde Park, please stop Let’s keep in touch in self-assembled monolayers on a surface of gold. -
Faculty File H ONORS and a WARDS
Faculty File H ONORS AND A WARDS Deniz Armani, a fourth- kins Professor of Chemistry, year grad student in the has received the 2003 Pauling research group of Jenkins Award Medal, which is pre- Professor of Information sented annually by the Ore- Science and Technology and gon, Portland, and Puget professor of applied physics Sound Sections of the Ameri- Kerry Vahala, has won first can Chemical Society. Named prize at the Leading Edge after the late Linus Pauling, Student Symposium, held as the medal recognizes “out- part of the 36th Annual Sym- standing contributions to posium of the Southern Cali- chemistry . that have fornia Chapter of the Ameri- merited national and interna- can Vacuum Society (AVS). tional recognition.” The title of his presentation Babak Hassibi, assistant was “Ultra-High-Q Toroid professor of electrical engi- Microcavity on a Chip” and neering, has been awarded a G RAY W INS described research on the first five-year, $625,000 David W OLF P RIZE ultra-high-Q microresonator and Lucile Packard Fellowship on a chip and related applica- in Science and Engineering. tions. Other grad student Michael Hoffmann, the coauthors on the presentation Irvine Professor of Environ- were Sean Spillane, Tobias mental Science and dean of Kippenberg, Lan Yang, and graduate studies, was honored Andrea Martin, all of by the University of Toronto’s applied physics. department of chemistry as David Baltimore, Caltech the 2003–04 A. R. Gordon president and Nobel laureate Distinguished Lecturer in in physiology or medicine, is Chemistry. the seventh most-cited scien- Fatemeh Jalayer, the tist of the last two decades, Housner Postdoctoral Scholar according to the top-50 list in Civil Engineering, has published by Thomson ISI in been named a corecipient of Science Watch. -
Honda Prize 2011 for His Pioneering Contributions to Surface Chemistry That Established the Foundation of Today’S Sophisticated Catalysis
公益財団法人 本田財団 104-0028 東京都中央区八重洲2-6-20 Tel 03-3274-5125 Fax 03-3274-5103 http://www.hondafoundation.jp PRESS RELEASE September 27, 2011 UC Berkeley Chemist Dr. Gabor Somorjai to Receive Honda Prize 2011 for His Pioneering Contributions to Surface Chemistry that Established the Foundation of Today’s Sophisticated Catalysis The Honda Foundation, a public-interest incorporated foundation created by Honda Motor‟s founder Soichiro Honda and his younger brother Benjiro Honda, and currently headed by Hiroto Ishida, is pleased to announce that the Honda Prize 2011 will be awarded to Dr. Gabor Somorjai, Professor of Chemistry at the University of California Berkeley, U.S.A., for his pioneering contributions to surface science. His introduction of basic chemical approaches to solid-state physics revolutionized the understanding of the nature of surface interactions when scientific data on surfaces were scarce, and elevated the study of catalysis to the mainstay of surface science. Dr. Somorjai becomes the 32nd laureate of the Honda Prize1. Catalytic chemistry benefits millions of people via its extensive studies of functional materials, especially by finding ways to efficiently synthesize useful substances under specific, mild conditions. Some examples include ammonia-based fertilizers, polyethylene and other plastic polymers, amino acids synthesized by using the Nobel laureate Dr. Noyori‟s asymmetric hydrogenation process, and catalytic converters that clean up car exhaust. On the ecotechnological front, it is expected that further sophistication of metallic catalysts would substantially reduce the cost of fuel cell production. Dr. Somorjai‟s finding that the molecules produced in reactions are controlled by the size and shape of catalyst nanoparticles led to the evolution of green chemistry that produces only the desired product molecule without the chemical waste byproducts. -
Robert Burns Woodward
The Life and Achievements of Robert Burns Woodward Long Literature Seminar July 13, 2009 Erika A. Crane “The structure known, but not yet accessible by synthesis, is to the chemist what the unclimbed mountain, the uncharted sea, the untilled field, the unreached planet, are to other men. The achievement of the objective in itself cannot but thrill all chemists, who even before they know the details of the journey can apprehend from their own experience the joys and elations, the disappointments and false hopes, the obstacles overcome, the frustrations subdued, which they experienced who traversed a road to the goal. The unique challenge which chemical synthesis provides for the creative imagination and the skilled hand ensures that it will endure as long as men write books, paint pictures, and fashion things which are beautiful, or practical, or both.” “Art and Science in the Synthesis of Organic Compounds: Retrospect and Prospect,” in Pointers and Pathways in Research (Bombay:CIBA of India, 1963). Robert Burns Woodward • Graduated from MIT with his Ph.D. in chemistry at the age of 20 Woodward taught by example and captivated • A tenured professor at Harvard by the age of 29 the young... “Woodward largely taught principles and values. He showed us by • Published 196 papers before his death at age example and precept that if anything is worth 62 doing, it should be done intelligently, intensely • Received 24 honorary degrees and passionately.” • Received 26 medals & awards including the -Daniel Kemp National Medal of Science in 1964, the Nobel Prize in 1965, and he was one of the first recipients of the Arthur C. -
Acta 20, 2009
07_Eschenmoser(OK) Gabri_dis:Layout 1 25/09/09 11:07 Pagina 181 Scientific Insights into the Evolution of the Universe and of Life Pontifical Academy of Sciences, Acta 20, 2009 www.pas.va/content/dam/accademia/pdf/acta20/acta20-eschenmoser.pdf THE SEARCH FOR THE CHEMISTRY OF LIFE’S ORIGIN ALBERT ESCHENMOSER A central postulate of contemporary natural science states that life emerged on Earth (or elsewhere) through a transition of chemical matter from non-living to living. The transition is seen as a contingent consequence of the second law of thermodynamics and the chemical properties of matter by one group of scientists, and as an imperative of that law and those prop- erties according to the belief of others. Chemical matter is postulated to have been capable of organizing itself out of disorder by channeling exergonic geochemical reactions into reaction networks that had a dynamic structure with kinetic (as opposed to thermodynamic) stability and were driven by autocatalytic molecular replication cycles. The postulate implicates that such chemical systems eventually became self-sustaining (capable of exploit- ing environmental sources for reconstituting itself), adaptive (capable of reacting to physical or chemical changes in the environment such that sur- vival as a system is maintained) and – by operating in compartments – capa- ble of evolving. From this perspective, life’s origin is seen as a seamless tran- sition from self-ordering chemical reactions to self-sustaining chemical sys- tems that are capable of Darwinian evolution [1]. Figure 1 delineates – in terms of a ‘conceptual cartoon’ – such a programmatic view in more detail. Evidence from paleontology, biology, geology and planetary science posits the appearance of life on Earth into a period of 3 to 4 billion years ago. -
1 CURRICULUM VITAE RUDOLPH A. MARCUS Personal Information
CURRICULUM VITAE RUDOLPH A. MARCUS Personal Information Date of Birth: July 21, 1923 Place of Birth: Montreal, Canada Married: Laura Hearne (dec. 2003), 1949 (three sons: Alan, Kenneth, and Raymond) Citizenship: U.S.A. (naturalized 1958) Education B.Sc. in Chemistry, McGill University, Montreal, Canada, 1943 Ph.D. in Chemistry, McGill University, 1946 Professional Experience Postdoctoral Research, National Research Council of Canada, Ottawa, Canada, 1946-49 Postdoctoral Research, University of North Carolina, 1949-51 Assistant Professor, Polytechnic Institute of Brooklyn, 1951-54; Associate Professor, 1954-58; Professor, 1958-64; (Acting Head, Division of Physical Chemistry, 1961-62) Member, Courant Institute of Mathematical Sciences, New York University, 1960-61 Professor, University of Illinois, 1964-78 (Head, Division of Physical Chemistry, 1967-68) Visiting Professor of Theoretical Chemistry, IBM, University of Oxford, England, 1975-76 Professorial Fellow, University College, University of Oxford, 1975-76 Arthur Amos Noyes Professor of Chemistry, California Institute of Technology, 1978-2012 Professor (hon.), Fudan University, Shanghai, China, 1994- Professor (hon.), Institute of Chemistry, Chinese Academy of Sciences, Beijing, China, 1995- Fellow (hon.), University College, University of Oxford, 1995- Linnett Visiting Professor of Chemistry, University of Cambridge, 1996 Honorable Visitor, National Science Council, Republic of China, 1999 Professor (hon.), China Ocean University, Qingdao, China, 2002 - Professor (hon.), Tianjin University, Tianjin, China, 2002- Professor (hon.) Dalian Institute of Chemical Physics, Dalian, China, 2005- Professor (hon.) Wenzhou Medical College, Wenzhou, China, 2005- Distinguished Affiliated Professor, Technical University of Munich, 2008- Visiting Nanyang Professor, Nanyang Institute of Technology, Singapore 2009- Chair Professor (hon.) University System of Taiwan, 2011 Distinguished Professor (hon.), Tumkur University, India, 2012 Arthur Amos Noyes Professor of Chemistry, California Institute of Technology, 1978-2013 John G. -
Richard N. Zare: Curriculum Vitae (Abridged Version)
Richard N. Zare: Curriculum Vitae (abridged version) BIOGRAPHICAL INFORMATION Born: Cleveland, Ohio, November 19, 1939 Married: Susan Shively Zare Children: Bethany Jean; Bonnie Sue; Rachel Amdur EDUCATION AND PROFESSIONAL EXPERIENCE 1961 B.A. (Chemistry and Physics), Harvard University 1961--1963 Postgraduate work, University of California at Berkeley 1964 Ph.D. (Chemical Physics), Harvard University, (NSF Predoctoral Fellow) 1964--1965 Postdoctoral Research Associate, Joint Institute for Laboratory Astrophysics (JILA), University of Colorado 1965--1966 Assistant Professor, Department of Chemistry, Massachusetts Institute of Technology 1966--1968 Assistant Professor, Department of Physics and Astrophysics, University of Colorado 1968--1969 Associate Professor, Department of Physics and Astrophysics and Department of Chemistry, University of Colorado 1969--1977 Professor, Department of Chemistry, Columbia University 1975--1977 Higgins Professor of Natural Science, Columbia University 1977-- Professor, Department of Chemistry, Stanford University 1980--1985 Shell Distinguished Professor of Chemistry, Stanford University 1982 Christensen Fellow, St. Catherine's College, Oxford University 1984--1986 Stanford University Fellow 1985-- Fellow Adjoint, Joint Institute for Laboratory Astrophysics, University of Colorado 1987-- Marguerite Blake Wilbur Professor in Natural Science, Stanford University 1992-- Professor of Physics, Stanford University 2006-- Howard Hughes Medical Institute Professor, Stanford University HONORS AND AWARDS Honorary Membership into the Japan Society for Analytical Chemistry (JSAC), 2011 Einstein Professorship of the Chinese Academy of Sciences, 2011 King Faisal International Prize in Science (shared with George M. Whitesides), 2011 R. B. Bernstein Award in Stereodynamics (shared with R.D. Levine), 2010 Honorary Fellow of the Chinese Chemical Society, elected 2010 BBVA Foundation Frontiers of Knowledge Award in the Basic Sciences category (shared with Michael E. -
REVIEW RNA: Prebiotic Product, Or Biotic Invention?
CHEMISTRY & BIODIVERSITY – Vol. 4 (2007) 721 REVIEW RNA: Prebiotic Product, or Biotic Invention? by Carole Anastasi, Fabien F. Buchet, Michael A. Crowe, Alastair L. Parkes, MatthewW. Powner , James M. Smith, and John D. Sutherland* School of Chemistry, University of Manchester, Oxford Road, Manchester M139PL, UK (phone: ( þ44)1612754614; fax: (þ44)1612754939; e-mail: [email protected]) Spectacular advances in structural and molecular biology have added support to the RNA world hypothesis, and provide a mandate for chemistry to explain how RNA might have been generated prebiotically on the early earth. Difficulties in achieving a prebiotically plausible synthesis of RNA, however, have led many to ponder the question posed in the title of this paper. Herein, we review recent experimental work on the assembly of potential RNA precursors, focusing on methods for stereoselective CÀC bond construction by aldolisation and related processes. This chemistry is presented in the context of a broader picture of the potential constitutional self-assembly of RNA. Finally, the relative accessibility of RNA and alternative nucleic acids is considered. Introduction. – A robust, prebiotically plausible synthesis of RNA, if achieved, will dramatically strengthen the case for the RNA world hypothesis [1][2]. Despite nearly half a century of effort, however, the prospects for such a synthesis have appeared somewhat remote. Difficulties in the generation and oligomerisation of activated nucleotides have led to suggestions that RNA might have been preceded by a simpler informational macromolecule [1–3]. It has been suggested that a biology based on this simpler nucleic acid might have then invented RNA. According to this scheme, functional superiority of RNA would have subsequently driven the transition to a biology based on RNA, and the RNA world would have been born (Fig.