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Single Nucleotide Variants in Metastasis-Related Genes Are
View metadata, citation and similar papers at core.ac.uk brought to you by CORE HHS Public Access provided by CDC Stacks Author manuscript Author ManuscriptAuthor Manuscript Author Mol Carcinog Manuscript Author . Author manuscript; Manuscript Author available in PMC 2018 March 01. Published in final edited form as: Mol Carcinog. 2017 March ; 56(3): 1000–1009. doi:10.1002/mc.22565. Single nucleotide variants in metastasis-related genes are associated with breast cancer risk, by lymph node involvement and estrogen receptor status, in women with European and African ancestry Michelle R. Roberts1,2,3, Lara E. Sucheston-Campbell4, Gary R. Zirpoli5, Michael Higgins6, Jo L. Freudenheim3, Elisa V. Bandera7, Christine B. Ambrosone2, and Song Yao2 1Channing Division of Network Medicine, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 2Department of Cancer Prevention and Control, Roswell Park Cancer Institute, Buffalo, NY 3Department of Epidemiology and Environmental Health, University at Buffalo, Buffalo, NY 4Division of Pharmacy Practice and Science, The Ohio State University, Columbus, OH 5Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA 6Department of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY 7Rutgers Cancer Institute of New Jersey, New Brunswick, NJ Abstract Background—Single nucleotide polymorphisms (SNPs) in pathways influencing lymph node (LN) metastasis and estrogen receptor (ER) status in breast cancer may partially explain inter- patient variability in prognosis. We examined 154 SNPs in 12 metastasis-related genes for associations with breast cancer risk, stratified by LN and ER status, in European-American (EA) and African-American (AA) women. Methods—2,671 women enrolled in the Women’s Circle of Health Study were genotyped. -
Review Article Multiple Endocrine Neoplasia Type 2 And
J Med Genet 2000;37:817–827 817 J Med Genet: first published as 10.1136/jmg.37.11.817 on 1 November 2000. Downloaded from Review article Multiple endocrine neoplasia type 2 and RET: from neoplasia to neurogenesis Jordan R Hansford, Lois M Mulligan Abstract diseases for families. Elucidation of genetic Multiple endocrine neoplasia type 2 (MEN mechanisms and their functional consequences 2) is an inherited cancer syndrome char- has also given us clues as to the broader acterised by medullary thyroid carcinoma systems disrupted in these syndromes which, in (MTC), with or without phaeochromocy- turn, have further implications for normal toma and hyperparathyroidism. MEN 2 is developmental or survival processes. The unusual among cancer syndromes as it is inherited cancer syndrome multiple endocrine caused by activation of a cellular onco- neoplasia type 2 (MEN 2) and its causative gene, RET. Germline mutations in the gene, RET, are a useful paradigm for both the gene encoding the RET receptor tyrosine impact of genetic characterisation on disease kinase are found in the vast majority of management and also for the much broader MEN 2 patients and somatic RET muta- developmental implications of these genetic tions are found in a subset of sporadic events. MTC. Further, there are strong associa- tions of RET mutation genotype and disease phenotype in MEN 2 which have The RET receptor tyrosine kinase led to predictions of tissue specific re- MEN 2 arises as a result of activating mutations of the RET (REarranged during quirements and sensitivities to RET activ- 1–5 ity. Our ability to identify genetically, with Transfection) proto-oncogene. -
SIPA1 Is a Modulator of HGF/MET Induced Tumour Metastasis Via the Regulation of Tight Junction-Based Cell to Cell Barrier Function
cancers Article SIPA1 Is a Modulator of HGF/MET Induced Tumour Metastasis via the Regulation of Tight Junction-Based Cell to Cell Barrier Function Chang Liu 1, Wenguo Jiang 1 , Lijian Zhang 2, Rachel Hargest 1,* and Tracey A. Martin 1,* 1 Division of Cancer and Genetics, School of Medicine, Cardiff University, Heath Park, Cardiff CF14 4XN, UK; [email protected] (C.L.); [email protected] (W.J.) 2 Peking University School of Oncology and Peking University Cancer Hospital, Fucheng Road, Beijing 100142, China; [email protected] * Correspondence: [email protected] (R.H.); [email protected] (T.A.M.); Tel.: +44-29-2068-7130 (R.H.) Simple Summary: The role of Signal Induced Proliferation Associated 1 (SIPA1) in lung cancer remains largely unknown. This study aimed to evaluate the importance of SIPA1 in the development and progression of lung cancer, to demonstrate the cellular functions of SIPA1 and the molecular mechanisms involved. Abstract: Background: Lung cancer is the leading cause of cancer death. SIPA1 is a mitogen induced GTPase activating protein (GAP) and may hamper cell cycle progression. SIPA1 has been shown to be involved in MET signaling and may contribute to tight junction (TJ) function and cancer metastasis. Methods: Human lung tumour cohorts were analyzed. In vitro cell function assays were performed after knock down of SIPA1 in lung cancer cells with/without treatment. Quantitative Citation: Liu, C.; Jiang, W.G.; Zhang, polymerase chain reaction (qPCR) and western blotting were performed to analyze expression of L.; Hargest, R.; Martin, T.A. SIPA1 Is a HGF (hepatocyte growth factor), MET, and their downstream markers. -
A Genome-Wide Library of MADM Mice for Single-Cell Genetic Mosaic Analysis
bioRxiv preprint doi: https://doi.org/10.1101/2020.06.05.136192; this version posted June 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Contreras et al., A Genome-wide Library of MADM Mice for Single-Cell Genetic Mosaic Analysis Ximena Contreras1, Amarbayasgalan Davaatseren1, Nicole Amberg1, Andi H. Hansen1, Johanna Sonntag1, Lill Andersen2, Tina Bernthaler2, Anna Heger1, Randy Johnson3, Lindsay A. Schwarz4,5, Liqun Luo4, Thomas Rülicke2 & Simon Hippenmeyer1,6,# 1 Institute of Science and Technology Austria, Am Campus 1, 3400 Klosterneuburg, Austria 2 Institute of Laboratory Animal Science, University of Veterinary Medicine Vienna, Vienna, Austria 3 Department of Biochemistry and Molecular Biology, University of Texas, Houston, TX 77030, USA 4 HHMI and Department of Biology, Stanford University, Stanford, CA 94305, USA 5 Present address: St. Jude Children’s Research Hospital, Memphis, TN 38105, USA 6 Lead contact #Correspondence and requests for materials should be addressed to S.H. ([email protected]) 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.06.05.136192; this version posted June 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Contreras et al., SUMMARY Mosaic Analysis with Double Markers (MADM) offers a unique approach to visualize and concomitantly manipulate genetically-defined cells in mice with single-cell resolution. -
The Erbb Receptor Tyrosine Family As Signal Integrators
Endocrine-Related Cancer (2001) 8 151–159 The ErbB receptor tyrosine family as signal integrators N E Hynes, K Horsch, M A Olayioye and A Badache Friedrich Miescher Institute, PO Box 2543, CH-4002 Basel, Switzerland (Requests for offprints should be addressed to N E Hynes, Friedrich Miescher Institute, R-1066.206, Maulbeerstrasse 66, CH-4058 Basel, Switzerland. Email: [email protected]) (M A Olayioye is now at The Walter and Eliza Hall Institute of Medical Research, PO Royal Melbourne Hospital, Victoria 3050, Australia) Abstract ErbB receptor tyrosine kinases (RTKs) and their ligands have important roles in normal development and in human cancer. Among the ErbB receptors only ErbB2 has no direct ligand; however, ErbB2 acts as a co-receptor for the other family members, promoting high affinity ligand binding and enhancement of ligand-induced biological responses. These characteristics demonstrate the central role of ErbB2 in the receptor family, which likely explains why it is involved in the development of many human malignancies, including breast cancer. ErbB RTKs also function as signal integrators, cross-regulating different classes of membrane receptors including receptors of the cytokine family. Cross-regulation of ErbB RTKs and cytokines receptors represents another mechanism for controlling and enhancing tumor cell proliferation. Endocrine-Related Cancer (2001) 8 151–159 Introduction The EGF-related peptide growth factors The epidermal growth factor (EGF) or ErbB family of type ErbB receptors are activated by ligands, known as the I receptor tyrosine kinases (RTKs) has four members:EGF EGF-related peptide growth factors (reviewed in Peles & receptor, also termed ErbB1/HER1, ErbB2/Neu/HER2, Yarden 1993, Riese & Stern 1998). -
Unveiling the Molecular Mechanisms Regulating the Activation of the Erbb Family Receptors at Atomic Resolution Through Molecular Modeling and Simulations
University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations Spring 2011 Unveiling the Molecular Mechanisms Regulating the Activation of the ErbB Family Receptors at Atomic Resolution through Molecular Modeling and Simulations Andrew Shih University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/edissertations Part of the Biophysics Commons, Other Biomedical Engineering and Bioengineering Commons, and the Structural Biology Commons Recommended Citation Shih, Andrew, "Unveiling the Molecular Mechanisms Regulating the Activation of the ErbB Family Receptors at Atomic Resolution through Molecular Modeling and Simulations" (2011). Publicly Accessible Penn Dissertations. 302. https://repository.upenn.edu/edissertations/302 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/edissertations/302 For more information, please contact [email protected]. Unveiling the Molecular Mechanisms Regulating the Activation of the ErbB Family Receptors at Atomic Resolution through Molecular Modeling and Simulations Abstract The EGFR/ErbB/HER family of kinases contains four homologous receptor tyrosine kinases that are important regulatory elements in key signaling pathways. To elucidate the atomistic mechanisms of dimerization-dependent activation in the ErbB family, we have performed molecular dynamics simulations of the intracellular kinase domains of the four members of the ErbB family (those with known kinase activity), namely EGFR, ErbB2 (HER2) -
Targeting the Function of the HER2 Oncogene in Human Cancer Therapeutics
Oncogene (2007) 26, 6577–6592 & 2007 Nature Publishing Group All rights reserved 0950-9232/07 $30.00 www.nature.com/onc REVIEW Targeting the function of the HER2 oncogene in human cancer therapeutics MM Moasser Department of Medicine, Comprehensive Cancer Center, University of California, San Francisco, CA, USA The year 2007 marks exactly two decades since human HER3 (erbB3) and HER4 (erbB4). The importance of epidermal growth factor receptor-2 (HER2) was func- HER2 in cancer was realized in the early 1980s when a tionally implicated in the pathogenesis of human breast mutationally activated form of its rodent homolog neu cancer (Slamon et al., 1987). This finding established the was identified in a search for oncogenes in a carcinogen- HER2 oncogene hypothesis for the development of some induced rat tumorigenesis model(Shih et al., 1981). Its human cancers. An abundance of experimental evidence human homologue, HER2 was simultaneously cloned compiled over the past two decades now solidly supports and found to be amplified in a breast cancer cell line the HER2 oncogene hypothesis. A direct consequence (King et al., 1985). The relevance of HER2 to human of this hypothesis was the promise that inhibitors of cancer was established when it was discovered that oncogenic HER2 would be highly effective treatments for approximately 25–30% of breast cancers have amplifi- HER2-driven cancers. This treatment hypothesis has led cation and overexpression of HER2 and these cancers to the development and widespread use of anti-HER2 have worse biologic behavior and prognosis (Slamon antibodies (trastuzumab) in clinical management resulting et al., 1989). -
Crosstalk Between EGFR and Trkb Enhances Ovarian Cancer Cell Migration and Proliferation
1003-1011 9/9/06 14:04 Page 1003 INTERNATIONAL JOURNAL OF ONCOLOGY 29: 1003-1011, 2006 Crosstalk between EGFR and TrkB enhances ovarian cancer cell migration and proliferation LIHUA QIU1,2, CHANGLIN ZHOU1, YUN SUN1,2, WEN DI1, ERICA SCHEFFLER2, SARAH HEALEY2, NICOLA KOUTTAB3, WENMING CHU4 and YINSHENG WAN2 1Department of OB/GYN, Renji Hospital, Shanghai Jiaotong University, Shanghai 200001, P.R. China; 2Department of Biology, Providence College, Providence, RI 02918; 3Department of Pathology, Roger Williams Medical Center, Boston University, Providence, RI 02908; 4Department of Molecular Microbiology and Immunology, Brown University, Providence, RI 02903, USA Received March 16, 2006; Accepted May 17, 2006 Abstract. Ovarian cancer remains the leading cause of fatality combination of inhibitors of both receptors with cell survival among all gynecologic cancers, although promising therapies pathway inhibitors would provide a better outcome in the are in the making. It has been speculated that metastasis is clinical treatment of ovarian cancer. critical for ovarian cancer, and yet the molecular mechanisms of metastasis in ovarian cancer are poorly understood. Growth Introduction factors have been proven to play important roles in cell migration associated with metastasis, and inhibition of growth Ovarian cancer is the most frequent cause of cancer death factor receptors and their distinct cell signaling pathways has among all gynecologic cancers, and therapies over the last 30 been intensively studied, and yet the uncovered interaction or -
Somatic Ephrin Receptor Mutations Are Associated with Metastasis in Primary Colorectal Cancer Running Title
Author Manuscript Published OnlineFirst on January 20, 2017; DOI: 10.1158/0008-5472.CAN-16-1921 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. Uvyr)Thvp ru v rpr hv h r hpvhrq vu rhhv v vh py rphy phpr Svt vyr) 6u ) " #$ % & '$ $( $)*# $ ,$$ - ./ 0 1 " , $'2 / ' - , $$03$, 4, 5$ $ 6 7$ % & 8 8$ 9 6ssvyvhv) . 8 : .2 $ 5 1 $ ; $ ;# < %. 8 : ., , $ ;# $ < -: . $, 8 $ . . 8 ; $ ;# /. 8 : . $; $ ;# < 0= $ 1 2 . , >2,, $ ?&, $ 2 . & $ , $@ ABA%B, $ < 4: . $ $ $ ; $ ;# < 6: .2 $ 5 1 $ .@ $ $ $ = $ ; $ ;# < Downloaded from cancerres.aacrjournals.org on September 26, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on January 20, 2017; DOI: 10.1158/0008-5472.CAN-16-1921 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. & 8 * $$ < 9& $8 C 8 < 8$ D< < 8syvp s vr rC & . $@ $, $ ', $E $ . $ 8$:7'@ < % Downloaded from cancerres.aacrjournals.org on September 26, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on January 20, 2017; DOI: 10.1158/0008-5472.CAN-16-1921 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. 6i hpC& 8 . . $ $ >? $ <& . # $# . $ $ .464A6 22)2 . $. E<& # $ >?. $ . ). $ . ) . $$ 222 2 < $ $ . @ . <& 8$. $ ., ::)$$@,. ) $ ),@$$<F .8 222 . , $) ,::)$$ ), $E <& 8# # $8 , < - Downloaded from cancerres.aacrjournals.org on September 26, 2021. © 2017 American Association for Cancer Research. Author Manuscript Published OnlineFirst on January 20, 2017; DOI: 10.1158/0008-5472.CAN-16-1921 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited. D qpv #$ .$$) $ .. 8 >&5?>?<& . 8@ #$ $#$ # $ 8$ .8 . -
Activation of Transmembrane Cell-Surface Receptors Via a Common Mechanism? the ‘‘Rotation Model’’
Insights & Perspectives Hypotheses Activation of transmembrane cell-surface receptors via a common mechanism? The ‘‘rotation model’’ Ichiro N. Maruyama It has long been thought that transmembrane cell-surface receptors, such as typically consist of an extracellular receptor tyrosine kinases and cytokine receptors, among others, are activated by domain (ECD) and an intracellular ligand binding through ligand-induced dimerization of the receptors. However, domain (ICD) separated by a single transmembrane domain (TMD), with there is growing evidence that prior to ligand binding, various transmembrane the exception of bacterial receptors receptors have a preformed, yet inactive, dimeric structure on the cell surface. such as the aspartate receptor (Tar) Various studies also demonstrate that during transmembrane signaling, ligand and the serine receptor (Tsr), which binding to the extracellular domain of receptor dimers induces a rotation of have another TMD at their amino transmembrane domains, followed by rearrangement and/or activation of termini. Ligand binding to their ECDs often regulates kinases that are either intracellular domains. The paper here describes transmembrane cell-surface integrated into the receptor ICD, or receptors that are known or proposed to exist in dimeric form prior toligand binding, physically associated with the ICD. and discusses how these preformed dimers are activated by ligand binding. Apart from receptors that initiate signaling pathways inside cells via Keywords: tyrosine phosphorylation, there are .cytokine; dimerization; ligand binding; preformed dimer; transmembrane receptors in bacteria, fungi, and plants signaling; tyrosine kinase that phosphorylate histidine residues upon ligand binding. Furthermore, natriuretic peptide receptors, which are receptor-type guanylyl cyclases, Introduction cell membranes to the cytoplasm, and produce cGMP upon peptide binding. -
Polymorphic Genetic Control of Tumor Invasion in a Mouse Model of Pancreatic Neuroendocrine Carcinogenesis
Polymorphic genetic control of tumor invasion in a mouse model of pancreatic neuroendocrine carcinogenesis Matthew G. H. Chuna,b,c,d, Jian-Hua Maoc,1, Christopher W. Chiub,c, Allan Balmainc, and Douglas Hanahana,b,c,2,3 aDepartment of Biochemistry and Biophysics, bDiabetes Center, and cHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA 94143; and dProgram in Biological Sciences, University of California, San Francisco, CA 94158 Contributed by Douglas Hanahan, August 31, 2010 (sent for review August 2, 2010) Cancer is a disease subject to both genetic and environmental hallmark capability for invasive growth in the RT2 mouse model influences. In this study, we used the RIP1-Tag2 (RT2) mouse of cancer. model of islet cell carcinogenesis to identify a genetic locus that influences tumor progression to an invasive growth state. RT2 Results mice inbred into the C57BL/6 (B6) background develop both non- PNET Progression to Invasive Carcinoma Is Modulated by Genetic invasive pancreatic neuroendocrine tumors (PNET) and invasive Background. Following anecdotal observations that PNETs de- carcinomas with varying degrees of aggressiveness. In contrast, veloping in RT2 mice inbred into the C3H background were RT2 mice inbred into the C3HeB/Fe (C3H) background are compar- predominantly noninvasive, we carefully examined the distribu- atively resistant to the development of invasive tumors, as are RT2 tion of the distinctive invasive phenotypes in de novo PNETs C3HB6(F1) hybrid mice. Using linkage analysis, we identified a 13- arising in RT2 mice inbred into either the B6 or C3H genetic Mb locus on mouse chromosome 17 with significant linkage to the backgrounds, as well as in C3HB6(F1) hybrids (F1), to determine development of highly invasive PNETs. -
Extracellular Juxtamembrane Motif Critical for Trkb Preformed Dimer and Activation
cells Article Extracellular Juxtamembrane Motif Critical for TrkB Preformed Dimer and Activation Jianying Shen 1,2, Dang Sun 1, Jingyu Shao 1, Yanbo Chen 1, Keliang Pang 1, Wei Guo 1,3 and Bai Lu 1,3,* 1 School of Pharmaceutical Sciences, IDG/McGovern Institute for Brain Research, Tsinghua University, Beijing 100084, China 2 Artemisinin Research Center, Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100084, China 3 R & D Center for the Diagnosis and Treatment of Major Brain Diseases, Research Institute of Tsinghua University in Shenzhen, Shenzhen 518057, China * Correspondence: [email protected]; Tel.: +86-10-6278-5101 Received: 29 May 2019; Accepted: 15 August 2019; Published: 19 August 2019 Abstract: Receptor tyrosine kinases are believed to be activated through ligand-induced dimerization. We now demonstrate that in cultured neurons, a substantial amount of endogenous TrkB, the receptor for brain-derived neurotrophic factor (BDNF), exists as an inactive preformed dimer, and the application of BDNF activates the pre-existing dimer. Deletion of the extracellular juxtamembrane motif (EJM) of TrkB increased the amount of preformed dimer, suggesting an inhibitory role of EJM on dimer formation. Further, binding of an agonistic antibody (MM12) specific to human TrkB-EJM activated the full-length TrkB and unexpectedly also truncated TrkB lacking ECD (TrkBdelECD365), suggesting that TrkB is activated by attenuating the inhibitory effect of EJM through MM12 binding-induced conformational changes. Finally, in cells co-expressing rat and human TrkB, MM12 could only activate TrkB human-human dimer but not TrkB human-rat TrkB dimer, indicating that MM12 binding to two TrkB monomers is required for activation.