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Guide for Common Viral Diseases of Animals in Louisiana
Sampling and Testing Guide for Common Viral Diseases of Animals in Louisiana Please click on the species of interest: Cattle Deer and Small Ruminants The Louisiana Animal Swine Disease Diagnostic Horses Laboratory Dogs A service unit of the LSU School of Veterinary Medicine Adapted from Murphy, F.A., et al, Veterinary Virology, 3rd ed. Cats Academic Press, 1999. Compiled by Rob Poston Multi-species: Rabiesvirus DCN LADDL Guide for Common Viral Diseases v. B2 1 Cattle Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 2 Deer and Small Ruminants Please click on the principle system involvement Generalized viral disease Respiratory viral disease Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 3 Swine Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 4 Horses Please click on the principle system involvement Generalized viral diseases Neurological viral diseases Respiratory viral diseases Enteric viral diseases Abortifacient/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 5 Dogs Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. -
Encapsulation of Biomolecules in Bacteriophage MS2 Viral Capsids
Encapsulation of Biomolecules in Bacteriophage MS2 Viral Capsids By Jeff Edward Glasgow A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Chemistry in the Graduate Division of the University of California, Berkeley Committee in Charge: Professor Matthew Francis, Co-Chair Professor Danielle Tullman-Ercek, Co-Chair Professor Michelle Chang Professor John Dueber Spring 2014 Encapsulation of Biomolecules in Bacteriophage MS2 Viral Capsids Copyright ©2014 By: Jeff Edward Glasgow Abstract Encapsulation of Biomolecules in Bacteriophage MS2 Viral Capsids By Jeff Edward Glasgow Doctor of Philosophy in Chemistry University of California, Berkeley Professor Matthew Francis, Co-Chair Professor Danielle Tullman-Ercek, Co-Chair Nanometer-scale molecular assemblies have numerous applications in materials, catalysis, and medicine. Self-assembly has been used to create many structures, but approaches can match the extraordinary combination of stability, homogeneity, and chemical flexibility found in viral capsids. In particular, the bacteriophage MS2 capsid has provided a porous scaffold for several engineered nanomaterials for drug delivery, targeted cellular imaging, and photodynamic thera- py by chemical modification of the inner and outer surfaces of the shell. This work describes the development of new methods for reassembly of the capsid with concomitant encapsulation of large biomolecules. These methods were then used to encapsulate a variety of interesting cargoes, including RNA, DNA, protein-nucleic acid and protein-polymer conjugates, metal nanoparticles, and enzymes. To develop a stable, scalable method for encapsulation of biomolecules, the assembly of the capsid from its constituent subunits was analyzed in detail. It was found that combinations of negatively charged biomolecules and protein stabilizing agents could enhance reassembly, while electrostatic interactions of the biomolecules with the positively charged inner surface led to en- capsulation. -
25 May 7, 2014
Joint Pathology Center Veterinary Pathology Services Wednesday Slide Conference 2013-2014 Conference 25 May 7, 2014 ______________________________________________________________________________ CASE I: 3121206023 (JPC 4035610). Signalment: 5-week-old mixed breed piglet, (Sus domesticus). History: Two piglets from the faculty farm were found dead, and another piglet was weak and ataxic and, therefore, euthanized. Gross Pathology: The submitted piglet was in good body condition. It was icteric and had a diffusely pale liver. Additionally, petechial hemorrhages were found on the kidneys, and some fibrin was present covering the abdominal organs. Laboratory Results: The intestine was PCR positive for porcine circovirus (>9170000). Histopathologic Description: Mesenteric lymph node: Diffusely, there is severe lymphoid depletion with scattered karyorrhectic debris (necrosis). Also scattered throughout the section are large numbers of macrophages and eosinophils. The macrophages often contain botryoid basophilic glassy intracytoplasmic inclusion bodies. In fewer macrophages, intranuclear basophilic inclusions can be found. Liver: There is massive loss of hepatocytes, leaving disrupted liver lobules and dilated sinusoids engorged with erythrocytes. The remaining hepatocytes show severe swelling, with micro- and macrovesiculation of the cytoplasm and karyomegaly. Some swollen hepatocytes have basophilic intranuclear, irregular inclusions (degeneration). Throughout all parts of the liver there are scattered moderate to large numbers of macrophages (without inclusions). Within portal areas there is multifocally mild to moderate fibrosis and bile duct hyperplasia. Some bile duct epithelial cells show degeneration and necrosis, and there is infiltration of neutrophils within the lumen. The limiting plate is often obscured mainly by infiltrating macrophages and eosinophils, and fewer neutrophils, extending into the adjacent parenchyma. Scattered are small areas with extra medullary hematopoiesis. -
Canine Circovirus in Foxes from Northern Italy: Where Did It All Begin?
pathogens Article Canine Circovirus in Foxes from Northern Italy: Where Did It All Begin? Giovanni Franzo 1,* , Maria Luisa Menandro 1 , Claudia Maria Tucciarone 1 , Giacomo Barbierato 1, Lorenzo Crovato 1 , Alessandra Mondin 1, Martina Libanora 2, Federica Obber 2, Riccardo Orusa 3, Serena Robetto 3, Carlo Citterio 2 and Laura Grassi 1 1 Department of Animal Medicine, Production and Health (MAPS), University of Padua, 35020 Legnaro, Italy; [email protected] (M.L.M.); [email protected] (C.M.T.); [email protected] (G.B.); [email protected] (L.C.); [email protected] (A.M.); [email protected] (L.G.) 2 O.U. of Ecopathology, SCT2 Belluno, Istituto Zooprofilattico Sperimentale delle Venezie (IZSVe), 32100 Belluno, Italy; [email protected] (M.L.); [email protected] (F.O.); [email protected] (C.C.) 3 S.C. Valle d.’Aosta—National Reference Centre Wildlife Diseases, Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d’Aosta (IZS PLV)—Ce.R.M.A.S., 11020 Quart, AO, Italy; [email protected] (R.O.); [email protected] (S.R.) * Correspondence: [email protected]; Tel.: +39-049-827-2968 Abstract: Canine circovirus (CanineCV) is a recently identified virus affecting both domestic and wild carnivores, including foxes, sometimes in presence of severe clinical signs. Its circulation in wild animals can thus represent a potential threat for endangered species conservation and an infection Citation: Franzo, G.; Menandro, source for dogs. Nevertheless, no data were available on its circulation in the Alps region of Northern M.L.; Tucciarone, C.M.; Barbierato, G.; Italy. -
Presentation
COMPLETE HEMORRHAGIC FEVER VIRUS INACTIVATION DURING LYSIS IN THE FILMARRAY BIOTHREAT-E ASSAY DEMONSTRATES THE BIOSAFETY OF THIS TEST. Olivier Ferraris (3), Françoise Gay-Andrieu (1), Marie Moroso (2), Fanny Jarjaval (3), Mark Miller (1), Christophe N. Peyrefitte (3) (1) bioMérieux, Marcy l’Etoile, France, (2) Fondation Mérieux, France (3) Unité de Virologie, Institut de recherche biomédicale des armées, Brétigny sur Orge, France Background : Viral hemorrhagic fevers (VHFs) are a group of illnesses caused by mainly five families of viruses namely Arenaviridae, Filoviridae , Bunyaviridae (Orthonairovirus genus ), Flaviviruses and Paramyxovirus (Henipavirus genus). The filovirus species known to cause disease in humans, Ebola virus (Zaire Ebolavirus), Sudan virus (Sudan Ebolavirus), Tai Forest virus (Tai Forest Ebolavirus), Bundibugyo virus (Bundibugyo Ebolavirus), and Marburg virus are restricted to Central Africa for 35 years, and spread to Guinea, Liberia, Sierra Leone in early 2014. Lassa fever is responsible for disease outbreaks across West Africa and in Southern Africa in 2008, with the identification of novel world arenavirus (Lujo virus). Henipavirus spread South Asia to Australia. CCHFv spread asia to south europa. They are transmitted from host reservoir by direct contacts or through vectors such as ticks bits. Working with VHF viruses, need a Biosafety Level 4 (BSL-4) laboratory, however during epidemics such observed with Ebola virus in 2014, the need to diagnose rapidly the patients raised the necessity to develop local laboratories These viruses represents a threat to healthcare workers and researches who manage infected diagnostic samples in laboratories. Aim : 1 Inactivation step An FilmArray Bio Thereat-E assay for detection of Hemorrhagic fever viruse Interfering substance HF virus + FA Lysis Buffer such as Ebola virus was developed to respond to Hemorrhagic fever virus 106 Ebola virus Whole blood + outbreak. -
Viruses in Transplantation - Not Always Enemies
Viruses in transplantation - not always enemies Virome and transplantation ECCMID 2018 - Madrid Prof. Laurent Kaiser Head Division of Infectious Diseases Laboratory of Virology Geneva Center for Emerging Viral Diseases University Hospital of Geneva ESCMID eLibrary © by author Conflict of interest None ESCMID eLibrary © by author The human virome: definition? Repertoire of viruses found on the surface of/inside any body fluid/tissue • Eukaryotic DNA and RNA viruses • Prokaryotic DNA and RNA viruses (phages) 25 • The “main” viral community (up to 10 bacteriophages in humans) Haynes M. 2011, Metagenomic of the human body • Endogenous viral elements integrated into host chromosomes (8% of the human genome) • NGS is shaping the definition Rascovan N et al. Annu Rev Microbiol 2016;70:125-41 Popgeorgiev N et al. Intervirology 2013;56:395-412 Norman JM et al. Cell 2015;160:447-60 ESCMID eLibraryFoxman EF et al. Nat Rev Microbiol 2011;9:254-64 © by author Viruses routinely known to cause diseases (non exhaustive) Upper resp./oropharyngeal HSV 1 Influenza CNS Mumps virus Rhinovirus JC virus RSV Eye Herpes viruses Parainfluenza HSV Measles Coronavirus Adenovirus LCM virus Cytomegalovirus Flaviviruses Rabies HHV6 Poliovirus Heart Lower respiratory HTLV-1 Coxsackie B virus Rhinoviruses Parainfluenza virus HIV Coronaviruses Respiratory syncytial virus Parainfluenza virus Adenovirus Respiratory syncytial virus Coronaviruses Gastro-intestinal Influenza virus type A and B Human Bocavirus 1 Adenovirus Hepatitis virus type A, B, C, D, E Those that cause -
Nipah Virus (Niv)
Nipah Virus (NiV) Nipah virus (NiV) is a member of the family Paramyxoviridae, genus Henipavirus. NiV was initially isolated and identified in 1999 during an outbreak of encephalitis and respiratory illness among pig farmers and people with close contact with pigs in Malaysia and Singapore. Its name originated from Sungai Nipah, a village in the Malaysian Peninsula where pig farmers became ill with encephalitis. Given the relatedness of NiV to Hendra virus, bat species were quickly singled out for investigation and flying foxes of the genus Pteropus were subsequently identified as the reservoir for NiV (Distribution Map). In the 1999 outbreak, Nipah virus caused a relatively mild disease in pigs, but nearly 300 human cases with over 100 deaths were reported. In order to stop the outbreak, more than a million pigs were euthanized, causing tremendous trade loss for Malaysia. Since this outbreak, no subsequent cases (in neither swine nor human) have been reported in either Malaysia or Singapore. In 2001, NiV was again identified as the causative agent in an outbreak of human disease occurring in Bangladesh. Genetic sequencing confirmed this virus as Nipah virus, but a strain different from the one identified in 1999. In the same year, another outbreak was identified retrospectively in Siliguri, India with reports of person-to-person transmission in hospital settings (nosocomial transmission). Unlike the Malaysian NiV outbreak, outbreaks occur almost annually in Bangladesh and have been reported several times in India. Transmission Transmission of Nipah virus to humans may occur after direct contact with infected bats, infected pigs, or from other NiV infected people. -
Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics
viruses Article Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics Ashleigh F. Porter 1, Mang Shi 1, John-Sebastian Eden 1,2 , Yong-Zhen Zhang 3,4 and Edward C. Holmes 1,3,* 1 Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life & Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW 2006, Australia; [email protected] (A.F.P.); [email protected] (M.S.); [email protected] (J.-S.E.) 2 Centre for Virus Research, Westmead Institute for Medical Research, Westmead, NSW 2145, Australia 3 Shanghai Public Health Clinical Center and School of Public Health, Fudan University, Shanghai 201500, China; [email protected] 4 Department of Zoonosis, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing 102206, China * Correspondence: [email protected]; Tel.: +61-2-9351-5591 Received: 17 October 2019; Accepted: 23 November 2019; Published: 25 November 2019 Abstract: DNA viruses comprise a wide array of genome structures and infect diverse host species. To date, most studies of DNA viruses have focused on those with the strongest disease associations. Accordingly, there has been a marked lack of sampling of DNA viruses from invertebrates. Bulk RNA sequencing has resulted in the discovery of a myriad of novel RNA viruses, and herein we used this methodology to identify actively transcribing DNA viruses in meta-transcriptomic libraries of diverse invertebrate species. Our analysis revealed high levels of phylogenetic diversity in DNA viruses, including 13 species from the Parvoviridae, Circoviridae, and Genomoviridae families of single-stranded DNA virus families, and six double-stranded DNA virus species from the Nudiviridae, Polyomaviridae, and Herpesviridae, for which few invertebrate viruses have been identified to date. -
Insights Into Circovirus Host Range from the Genomic Fossil Record
bioRxiv preprint doi: https://doi.org/10.1101/246777; this version posted March 8, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Insights into circovirus host range from the genomic fossil record. Running title: Circovirus host range Authors: Tristan P.W. Dennis1*, Peter J. Flynn2,3*, William Marciel de Souza1,4, Joshua B. Singer1, Corrie S. Moreau2, Sam J. Wilson1, Robert J. Gifford1 Affiliations: 1 MRC-University of Glasgow Centre for Virus Research, Glasgow, UK 2 Field Museum of Natural History, Department of Science and Education, Chicago, IL 60605, USA 3University of Chicago, Committee on Evolutionary Biology, Chicago IL 60637, USA 4 Virology Research Center, School of Medicine of Ribeirão Preto of University of São Paulo, Ribeirão Preto, Brazil * These authors contributed equally Corresponding author: Robert J. Gifford MRC-University of Glasgow Centre for Virus Research 464 Bearsden Road Glasgow, Scotland, UK E-mail: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/246777; this version posted March 8, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract A diverse range of DNA sequences derived from circoviruses (family Circoviridae) have been identified in samples obtained from humans and domestic animals, often in association with pathological conditions. -
Temporal and Spatial Limitations in Global Surveillance for Bat Filoviruses and Henipaviruses: Online Appendix Daniel J. Becker
Temporal and spatial limitations in global surveillance for bat filoviruses and henipaviruses: Online Appendix Daniel J. Becker, Daniel E. Crowley, Alex D. Washburne, Raina K. Plowright S1. Systematic search S2. Full reference list S3. Bat phylogeny S4. Post-hoc sampling design analysis S1. Systematic search Figure S1. The data collection and inclusion process for studies of wild bat filovirus and henipavirus prevalence and seroprevalence (PRISMA diagram). Searches used the following string: (bat* OR Chiroptera*) AND (filovirus OR henipavirus OR "Hendra virus" OR "Nipah virus" OR "Ebola virus" OR "Marburg virus" OR ebolavirus OR marburgvirus). Searches were run during October 2017. Publications were excluded if they did not assess filovirus or henipavirus prevalence or seroprevalence in wild bats or were in languages other than English. Records identified with Web of Science, CAB Abstracts, and PubMed (n = 1275) Identification Records after duplicates removed (n = 995) Screening Records screened Records excluded (n = 995) (n = 679) Full-text articles excluded for Full-text articles irrelevance, bats in assessed for eligibility captivity, other bat (n = 316) virus, not filovirus or henipavirus prevalence or Eligibility seroprevalence, not virus in bats (n = 260) Studies included in qualitative synthesis (n = 56) Studies included in Included quantitative synthesis (n = 56; n = 48 for the phylogenetic meta- analysis) S2. Full reference list 1. Amman, Brian R., et al. "Seasonal pulses of Marburg virus circulation in juvenile Rousettus aegyptiacus bats coincide with periods of increased risk of human infection." PLoS Pathogens 8.10 (2012): e1002877. 2. de Araujo, Jansen, et al. "Antibodies against Henipa-like viruses in Brazilian bats." Vector- Borne and Zoonotic Diseases 17.4 (2017): 271-274. -
Emerging Viral Infections
REVIEW CURRENT OPINION Emerging viral infections Michael R. Wilson Purpose of review This review highlights research and development in the field of emerging viral causes of encephalitis over the past year. Recent findings There is new evidence for the presence of henipaviruses in African bats. There have also been promising advances in vaccine and neutralizing antibody research against Hendra and Nipah viruses. West Nile virus continues to cause large outbreaks in the United States, and long-term sequelae of the virus are increasingly appreciated. There is exciting new research regarding the variable susceptibility of different brain regions to neurotropic virus infection. Another cluster of solid organ transplant recipients developed encephalitis from organ donor-acquired lymphocytic choriomeningitis virus. The global epidemiology of Japanese encephalitis virus has been further clarified. Evidence continues to accumulate for the central nervous system involvement of dengue virus, and the recent deadly outbreak of enterovirus 71 in Cambodian children is discussed. Summary In response to complex ecological and societal dynamics, the worldwide epidemiology of viral encephalitis continues to evolve in surprising ways. The articles highlighted here include new research on virus epidemiology and spread, new outbreaks as well as progress in the development of vaccines and therapeutics. Keywords aseptic meningitis, emerging viral infections, poliomyelitis, viral encephalitis, zoonosis INTRODUCTION mumps virus, lymphocytic choriomeningitis virus In response to complex ecological and societal (LCMV), poliovirus and dengue virus. dynamics, the worldwide epidemiology of viral encephalitis continues to evolve in surprising ways. EMERGING DISEASE VS. EMERGING These forces operate in a context in which we are DIAGNOSIS? increasingly able to identify novel pathogens because of improved diagnostic techniques and Outside the world of infectious disease, neuro- enhanced surveillance regimes [1&&,2]. -
Hendra Virus and Australian Wildlife Fact Sheet
Hendra virus and Australian wildlife Fact sheet Introductory statement Hendra virus (HeV) causes a potentially fatal disease of horses and humans. HeV emerged in 1994 and cases to date have been limited to Queensland (Qld) and New South Wales (NSW), where annual incidents are now reported. Flying-foxes are the natural reservoir of the virus. Horses are infected directly from flying-foxes or via their urine, body fluids or excretions. All human cases have resulted from direct contact with infected horses. Evidence of infection has been seen in two dogs that were in contact with infected horses. HeV has attracted international interest as one of a group of diseases of humans and domestic animals that has emerged from bats since the 1990s. HeV does not cause evident clinical disease in flying-foxes and direct transmission to humans from bats has not been demonstrated. Ongoing work is required to understand the ecology and factors driving emergence of this disease. Aetiology HeV is a RNA virus belonging to the family Paramyxoviridae, genus Henipavirus. Natural hosts There are four species of flying-fox on mainland Australia: Pteropus alecto black flying-fox Pteropus conspicillatus spectacled flying-fox Pteropus scapulatus little red flying-fox Pteropus poliocephalus grey-headed flying-fox While serologic evidence of HeV infection has been found in all four species (Field 2005), more recent research suggests that two species, the black flying-fox and spectacled flying-fox, are the primary reservoir hosts (Field et al. 2011; Smith et al. 2014; Edson et al. 2015; Goldspink et al. 2015). The impact of HeV infection on flying-fox populations is presumed to be minimal.