Arxiv:2003.01418V1 [Physics.Chem-Ph] 3 Mar 2020
Blue moon ensemble simulation of aquation free energy profiles applied to mono and bifunctional platinum anticancer drugs Teruo Hirakawa,1, 2 David R. Bowler,3, 4, 5 Tsuyoshi Miyazaki,6, 5 Yoshitada Morikawa,1, 7, 8 and Lionel A. Truflandier2, 1, a) 1)Department of Precision Science and Technology, Graduate School of Engineering, Osaka University, 2-1, Yamada-oka, Suita, Osaka 565-0871, Japan 2)Institut des Sciences Mol´eculaires (ISM), Universit´eBordeaux, CNRS UMR 5255, 351 cours de la Lib´eration, 33405 Talence cedex, France 3)Department of Physics & Astronomy, University College London (UCL), Gower St, London, WC1E 6BT, UK 4)London Centre for Nanotechnology, UCL, 17-19 Gordon St, London WC1H 0AH, UK 5)Centre for Materials Nanoarchitechtonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan 6)Computational Materials Science Unit (CMSU), NIMS, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan 7)Elements Strategy Initiative for Catalysts and Batteries (ESICB), Kyoto University, Katsura, Kyoto 615-8520, Japan 8)Research Center for Ultra-Precision Science and Technology, Graduate School of Engineering, Osaka University, 2-1, Yamada-oka, Suita, Osaka 565-0871, Japan (Dated: 4 March 2020) Aquation free energy profiles of neutral cisplatin and cationic mono- functional derivatives, including triaminochloroplatinum(II) and cis- diammine(pyridine)chloroplatinum(II), were computed using state of the art thermodynamic integration, for which temperature and solvent were accounted for explicitly using density functional theory based canonical molecular dynamics (DFT-MD). For all the systems the "inverse-hydration" where the metal center acts as an acceptor of hydrogen bond has been observed.
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