Checkpoint Kinase 2 Negatively Regulates Androgen Sensitivity and Prostate Cancer Cell Growth Huy Q

Total Page:16

File Type:pdf, Size:1020Kb

Checkpoint Kinase 2 Negatively Regulates Androgen Sensitivity and Prostate Cancer Cell Growth Huy Q Published OnlineFirst November 16, 2015; DOI: 10.1158/0008-5472.CAN-15-0224 Cancer Molecular and Cellular Pathobiology Research Checkpoint Kinase 2 Negatively Regulates Androgen Sensitivity and Prostate Cancer Cell Growth Huy Q. Ta1, Melissa L. Ivey1, Henry F. Frierson Jr2,3, Mark R. Conaway3,4, Jaroslaw Dziegielewski3,5, James M. Larner3,5, and Daniel Gioeli1,3 Abstract Prostate cancer is the second leading cause of cancer death in that CHK2 affects prostate cancer proliferation, partly, through American men, and curing metastatic disease remains a significant the AR. Remarkably, we further show that CHK2 is a novel AR- challenge. Nearly all patients with disseminated prostate cancer repressed gene, suggestive of a negative feedback loop between initially respond to androgen deprivation therapy (ADT), but CHK2 and AR. In addition, we provide evidence that CHK2 virtually all patients will relapse and develop incurable castration- physically associates with the AR and that cell-cycle inhibition resistant prostate cancer (CRPC). A high-throughput RNAi screen increased this association. Finally, IHC analysis of CHK2 in to identify signaling pathways regulating prostate cancer cell prostate cancer patient samples demonstrated a decrease in growth led to our discovery that checkpoint kinase 2 (CHK2) CHK2 expression in high-grade tumors. In conclusion, we pro- knockdown dramatically increased prostate cancer growth and pose that CHK2 is a negative regulator of androgen sensitivity and hypersensitized cells to low androgen levels. Mechanistic inves- prostate cancer growth, and that CHK2 signaling is lost during tigations revealed that the effects of CHK2 were dependent on the prostate cancer progression to castration resistance. Thus, perturb- downstream signaling proteins CDC25C and CDK1. Moreover, ing CHK2 signaling may offer a new therapeutic approach CHK2 depletion increased androgen receptor (AR) transcriptional for sensitizing CRPC to ADT and radiation. Cancer Res; 75(23); 1– activity on androgen-regulated genes, substantiating the finding 13. Ó2015 AACR. Introduction growth will lead to new therapies or the improvement of current treatments for the management of CRPC. Prostate cancer is the most common noncutaneous malignancy Current research has demonstrated that androgen receptor in American men. With approximately 30,000 deaths yearly, (AR) signaling continues to play a crucial role in CRPC progres- prostate cancer is the second leading cause of cancer mortality, sion. AR overexpression is sufficient to drive androgen-dependent following lung carcinoma. The standard treatment for advanced prostate cancer cells to castration resistance and facilitate prolif- prostate cancer is radiation and androgen deprivation therapy eration in low androgen levels (1). In addition to its cognate (ADT). Despite the high response rate to ADT, the outgrowth of steroid hormone, AR can be regulated by interactions with a castration-resistant cells will invariably occur with progression to constellation of coregulatory and signaling molecules (2). Several a lethal disease and a relative 5-year survival rate of 28% (www. mechanisms, including extensive networks between androgen cancer.org). Even with the recent advances in ADT that have led to and peptide growth factor signaling pathways, multiple genetic improvements in overall survival, castration-resistant prostate mutations, and the genetic plasticity of cancer, contribute to the cancer (CRPC) is still incurable. Therefore, insights into the inherent and acquired resistance to ADT (3). Previous studies have mechanisms by which androgens stimulate prostate cancer shown that signal transduction pathways can stimulate AR acti- vation. These studies illustrate that modulating signaling path- ways in prostate cancer models regulates castration-resistant 1Departments of Microbiology, Immunology, and Cancer Biology, Uni- growth, AR transcription, AR protein stability, AR DNA binding, 2 versity of Virginia, Charlottesville,Virginia. Department of Pathology, and AR phosphorylation (4–6). Together, these reports suggest University of Virginia Health System, Charlottesville, Virginia. 3Cancer Center Member, University of Virginia, Charlottesville, Virginia. that the ability of signaling cascades to influence AR function may 4Department of Public Health Sciences, University of Virginia, Char- have a significant role in CRPC progression, and that CRPC may 5 lottesville,Virginia. Department of Radiation Oncology, University of not be effectively treated by ligand-directed therapy alone. Virginia, Charlottesville, Virginia. Comparative genomic hybridization studies of cancer have Note: Supplementary data for this article are available at Cancer Research shown that loss of genetic material is much more common than Online (http://cancerres.aacrjournals.org/). gains or amplifications, suggesting that tumor suppressor genes Corresponding Author: Daniel Gioeli, University of Virginia, Jordan Hall Room 2- play a crucial role in tumor development (7). Individuals with 16, 1300 Jefferson Park Avenue, PO Box 800734, Charlottesville, VA 22908. defects in DNA damage response (DDR) signaling lose the natural Phone: 434-982-4243; Fax: 434-982-0689; E-mail: [email protected] protection against tumorigenesis and are more susceptible to doi: 10.1158/0008-5472.CAN-15-0224 cell transformation and cancer. Checkpoint kinase 2 (CHK2), a Ó2015 American Association for Cancer Research. serine/threonine kinase and candidate tumor suppressor gene, is www.aacrjournals.org OF1 Downloaded from cancerres.aacrjournals.org on September 24, 2021. © 2015 American Association for Cancer Research. Published OnlineFirst November 16, 2015; DOI: 10.1158/0008-5472.CAN-15-0224 Ta et al. essential in the cell-cycle checkpoint activated in response to RPMI-1640 (Invitrogen) with 10% heat-inactivated serum. LHS radiation-induced DNA double-strand breaks (DSB; refs. 8, 9). cells (a gift from Dr. William Hahn, Department of Medical Activated CHK2 phosphorylates multiple downstream effectors Oncology, Dana-Farber Cancer Institute and Harvard Medical involved in regulating cell-cycle arrest, apoptosis, DNA repair, School, Boston, MA) were grown in ProstaLife Epithelial Cell mitotic spindle assembly, and chromosomal stability (9, 10). Rare Medium (Lifeline). For growth and RNA experiments, phenol-red CHK2 germline mutations have been identified in several familial free RPMI-1640 media with 5% charcoal-stripped serum (CSS; cancers and rare somatic mutations have been reported in various Gemini) was used. Commercial DNA fingerprinting kits (DDC carcinomas, including those arising in the prostate, breast, and Medical) verified cell lines. The following STR markers were colon (11–13). These mutations affect the stability or kinase activity tested: CSF1PO, TPOX, TH01, Amelogenin, vWA, D16S539, of CHK2, suggesting that they may be involved in the pathogenesis D7S820, D13S317, and D5S818. Allelic score data revealed a of these neoplasms. LOH studies suggest that CHK2 mutations may pattern related to the scores reported by the ATCC, and consistent contribute to tumor development through haploinsufficiency (14). with their presumptive identity. Although loss of the q arm on chromosome 22 where CHK2 is Antibodies: CHK2, CDC25C, CDK1, ERK1/2, and HA (Cell located has been observed in breast, colorectal, and ovarian cancers, Signaling Technology); AR21 (in-house). Western blotting per- mutation of the remaining allele was not associated with this loss formed as previously described (21, 22). (15). However, the function of the remaining normal allele can be CHK2 primers were based on the human CHEK2 sequence disrupted (16). CHK2 splice variants lacking kinase activity or obtained from Genbank (BC004207.2; Supplementary Fig. S1A). mislocalized to the cytoplasm have been detected in breast cancer PCR was performed using iProof High-Fidelity DNA Polymerase (17). Reduced expression or total loss of CHK2 protein that was (Bio-Rad) and MGC Human CHEK2 Sequence-Verified cDNA as associated with mutation or promoter methylation has been found the template (Thermo Scientific). Amino-terminal triple HA-tagged in many cancers including those of the breast, urinary bladder, wild-type (wt) CHK2 was ligated into AgeI and EcoRI sites of the colon, ovary, and lung (15, 18, 19). Reports of other tumors lacking lentiviral expression vector pLJM1 (Addgene plasmid 19319) using CHK2 expression without any detectable mutation or promoter T4 DNA ligase (Promega), transformed into Stbl3 bacteria (Life methylation suggest that additional epigenetic, posttranscriptional, Technologies), and clones were sequenced for verification. or posttranslational mechanisms can decrease CHK2 protein levels TRC lentiviral human shRNAs targeting CHK2, CDC25C, and (20). Thus, these studies provide support that CHK2 behaves as a CDK1, and pLKO vector control (Thermo Scientific). tumor suppressor gene. In this study, we demonstrated that, in addition to dramatically CyQuant growth assays fl increasing prostate cancer proliferation, CHK2 depletion hyper- Assay was performed as previously described (22). Brie y, fi sensitized prostate cancer cells to castrate androgen levels. Con- shRNA or pLKO control virus was added to bronectin-coated m versely, CHK2 overexpression decreased cell growth. The CHK2- (1 g/mL) 96-well plates. Cells were plated in RPMI-1640 plus 5% m mediated effects on growth required the downstream signaling CSS with vehicle, 0 to 0.05 nmol/L R1881, and/or 10 mol/L fi proteins CDC25C and CDK1. We also found
Recommended publications
  • Inhibition of the Nrf2 Transcription Factor by the Alkaloid
    Oncogene (2013) 32, 4825–4835 & 2013 Macmillan Publishers Limited All rights reserved 0950-9232/13 www.nature.com/onc ORIGINAL ARTICLE Inhibition of the Nrf2 transcription factor by the alkaloid trigonelline renders pancreatic cancer cells more susceptible to apoptosis through decreased proteasomal gene expression and proteasome activity A Arlt1,4, S Sebens2,4, S Krebs1, C Geismann1, M Grossmann1, M-L Kruse1, S Schreiber1,3 and H Scha¨fer1 Evidence accumulates that the transcription factor nuclear factor E2-related factor 2 (Nrf2) has an essential role in cancer development and chemoresistance, thus pointing to its potential as an anticancer target and undermining its suitability in chemoprevention. Through the induction of cytoprotective and proteasomal genes, Nrf2 confers apoptosis protection in tumor cells, and inhibiting Nrf2 would therefore be an efficient strategy in anticancer therapy. In the present study, pancreatic carcinoma cell lines (Panc1, Colo357 and MiaPaca2) and H6c7 pancreatic duct cells were analyzed for the Nrf2-inhibitory effect of the coffee alkaloid trigonelline (trig), as well as for its impact on Nrf2-dependent proteasome activity and resistance to tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) and anticancer drug-induced apoptosis. Chemoresistant Panc1 and Colo357 cells exhibit high constitutive Nrf2 activity, whereas chemosensitive MiaPaca2 and H6c7 cells display little basal but strong tert-butylhydroquinone (tBHQ)-inducible Nrf2 activity and drug resistance. Trig efficiently decreased basal and tBHQ-induced Nrf2 activity in all cell lines, an effect relying on a reduced nuclear accumulation of the Nrf2 protein. Along with Nrf2 inhibition, trig blocked the Nrf2-dependent expression of proteasomal genes (for example, s5a/psmd4 and a5/psma5) and reduced proteasome activity in all cell lines tested.
    [Show full text]
  • Open Data for Differential Network Analysis in Glioma
    International Journal of Molecular Sciences Article Open Data for Differential Network Analysis in Glioma , Claire Jean-Quartier * y , Fleur Jeanquartier y and Andreas Holzinger Holzinger Group HCI-KDD, Institute for Medical Informatics, Statistics and Documentation, Medical University Graz, Auenbruggerplatz 2/V, 8036 Graz, Austria; [email protected] (F.J.); [email protected] (A.H.) * Correspondence: [email protected] These authors contributed equally to this work. y Received: 27 October 2019; Accepted: 3 January 2020; Published: 15 January 2020 Abstract: The complexity of cancer diseases demands bioinformatic techniques and translational research based on big data and personalized medicine. Open data enables researchers to accelerate cancer studies, save resources and foster collaboration. Several tools and programming approaches are available for analyzing data, including annotation, clustering, comparison and extrapolation, merging, enrichment, functional association and statistics. We exploit openly available data via cancer gene expression analysis, we apply refinement as well as enrichment analysis via gene ontology and conclude with graph-based visualization of involved protein interaction networks as a basis for signaling. The different databases allowed for the construction of huge networks or specified ones consisting of high-confidence interactions only. Several genes associated to glioma were isolated via a network analysis from top hub nodes as well as from an outlier analysis. The latter approach highlights a mitogen-activated protein kinase next to a member of histondeacetylases and a protein phosphatase as genes uncommonly associated with glioma. Cluster analysis from top hub nodes lists several identified glioma-associated gene products to function within protein complexes, including epidermal growth factors as well as cell cycle proteins or RAS proto-oncogenes.
    [Show full text]
  • PSMB6 Polyclonal Antibody Catalog Number:11684-2-AP 1 Publications
    For Research Use Only PSMB6 Polyclonal antibody Catalog Number:11684-2-AP 1 Publications www.ptglab.com Catalog Number: GenBank Accession Number: Purification Method: Basic Information 11684-2-AP BC000835 Antigen affinity purification Size: GeneID (NCBI): Recommended Dilutions: 150UL , Concentration: 450 μg/ml by 5694 WB 1:500-1:2000 Nanodrop and 227 μg/ml by Bradford Full Name: IHC 1:50-1:500 method using BSA as the standard; proteasome (prosome, macropain) IF 1:50-1:500 Source: subunit, beta type, 6 Rabbit Calculated MW: Isotype: 239 aa, 25 kDa IgG Observed MW: Immunogen Catalog Number: 25 kDa AG2296 Applications Tested Applications: Positive Controls: IF, IHC, WB,ELISA WB : HeLa cells, Caco-2 cells, fetal human brain tissue, Cited Applications: human liver tissue, mouse brain tissue, rat brain tissue WB IHC : human colon cancer tissue, human gliomas tissue Species Specificity: IF : HeLa cells, human, mouse, rat Cited Species: rat Note-IHC: suggested antigen retrieval with TE buffer pH 9.0; (*) Alternatively, antigen retrieval may be performed with citrate buffer pH 6.0 PSMB6(Proteasome subunit beta type-6) is also named as LMPY, Y and belongs to the peptidase T1B family.The Background Information proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.It may also catalyzes basal processing of intracellular antigens.It can be up-regulated in anaplastic thyroid cancer cell lines and down- regulated by IFNG/IFN-gamma (at protein level)(PMID:8066462;15613457).
    [Show full text]
  • Selection and Evaluation of Potential Reference Genes for Quantitative Real-Time PCR in Agaricus Blazei Based on Transcriptome Sequencing Data
    Hindawi BioMed Research International Volume 2021, Article ID 6661842, 13 pages https://doi.org/10.1155/2021/6661842 Research Article Selection and Evaluation of Potential Reference Genes for Quantitative Real-Time PCR in Agaricus blazei Based on Transcriptome Sequencing Data Yuan-Ping Lu, Jian-Hua Liao , Zhong-Jie Guo, Hui-Qing Zheng, Ling-Fang Lu, Zhi-Xin Cai, Zhi-Heng Zeng, Zheng-He Ying, and Mei-Yuan Chen Institute of Edible Fungi, Fujian Academy of Agricultural Sciences, Fuzhou, 350014 Fujian Province, China Correspondence should be addressed to Jian-Hua Liao; [email protected] and Mei-Yuan Chen; [email protected] Received 9 November 2020; Accepted 3 February 2021; Published 9 April 2021 Academic Editor: Giuliana Banche Copyright © 2021 Yuan-Ping Lu et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Quantitative real-time PCR (qRT-PCR) is widely used to detect gene expression due to its high sensitivity, high throughput, and convenience. The accurate choice of reference genes is required for normalization of gene expression in qRT-PCR analysis. In order to identify the optimal candidates for gene expression analysis using qRT-PCR in Agaricus blazei, we studied the potential reference genes in this economically important edible fungus. In this study, transcriptome datasets were used as source for identification of candidate reference genes. And 27 potential reference genes including 21 newly stable genes, three classical housekeeping genes, and homologous genes of three ideal reference genes in Volvariella volvacea, were screened based on transcriptome datasets of A.
    [Show full text]
  • Exosome-Transmitted PSMA3 and PSMA3-AS1 Promote Proteasome Inhibitor Resistance in Multiple Myeloma
    Published OnlineFirst January 4, 2019; DOI: 10.1158/1078-0432.CCR-18-2363 Translational Cancer Mechanisms and Therapy Clinical Cancer Research Exosome-Transmitted PSMA3 and PSMA3-AS1 Promote Proteasome Inhibitor Resistance in Multiple Myeloma Hongxia Xu1,2, Huiying Han1, Sha Song1, Nengjun Yi3, Chen'ao Qian4, Yingchun Qiu1, Wenqi Zhou1, Yating Hong5, Wenyue Zhuang6, Zhengyi Li7, Bingzong Li5, and Wenzhuo Zhuang1 Abstract Purpose: How exosomal RNAs released within the bone Results: We identified that PSMA3 and PSMA3-AS1 in MSCs marrow microenvironment affect proteasome inhibitors' (PI) could be packaged into exosomes and transferred to myeloma sensitivity of multiple myeloma is currently unknown. This cells, thus promoting PI resistance. PSMA3-AS1 could form an study aims to evaluate which exosomal RNAs are involved and RNA duplex with pre-PSMA3, which transcriptionally promot- by which molecular mechanisms they exert this function. ed PSMA3 expression by increasing its stability. In xenograft Experimental Design: Exosomes were characterized by models, intravenously administered siPSMA3-AS1 was found dynamic light scattering, transmission electron microscopy, and to be effective in increasing carfilzomib sensitivity. Moreover, Western blot analysis. Coculture experiments were performed to plasma circulating exosomal PSMA3 and PSMA3-AS1 derived assess exosomal RNAs transferring from mesenchymal stem from patients with multiple myeloma were significantly asso- cells (MSC) to multiple myeloma cells. The role of PSMA3-AS1 ciated with PFS and OS. in PI sensitivity was further evaluated in vivo. To determine the Conclusions: This study suggested a unique role of exoso- prognostic significance of circulating exosomal PSMA3 and mal PSMA3 and PSMA3-AS1 in transmitting PI resistance from PSMA3-AS1, a cohort of patients with newly diagnosed multiple MSCs to multiple myeloma cells, through a novel exosomal myeloma was enrolled to study.
    [Show full text]
  • TNFR2 Signaling Regulates the Immunomodulatory Function of Oligodendrocyte Precursor Cells
    cells Article TNFR2 Signaling Regulates the Immunomodulatory Function of Oligodendrocyte Precursor Cells Haritha L. Desu 1, Placido Illiano 1, James S. Choi 1, Maureen C. Ascona 1, Han Gao 1,2, Jae K. Lee 1 and Roberta Brambilla 1,3,4,* 1 The Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL 33136, USA; [email protected] (H.L.D.); [email protected] (P.I.); [email protected] (J.S.C.); [email protected] (M.C.A.); [email protected] (H.G.); [email protected] (J.K.L.) 2 Department of Spine Surgery, The Third Affiliated Hospital of Sun Yat-Sen University, Guangzhou 510630, China 3 Department of Neurobiology Research, Institute of Molecular Medicine, and BRIDGE—Brain Research Inter Disciplinary Guided Excellence, 5000 Odense, Denmark 4 Department of Clinical Research, University of Southern Denmark, 5000 Odense, Denmark * Correspondence: [email protected]; Tel.: +305-243-3567 Abstract: Multiple sclerosis (MS) is a neuroimmune disorder characterized by inflammation, CNS demyelination, and progressive neurodegeneration. Chronic MS patients exhibit impaired remyeli- nation capacity, partly due to the changes that oligodendrocyte precursor cells (OPCs) undergo in response to the MS lesion environment. The cytokine tumor necrosis factor (TNF) is present in the MS-affected CNS and has been implicated in disease pathophysiology. Of the two active forms of TNF, transmembrane (tmTNF) and soluble (solTNF), tmTNF signals via TNFR2 mediating protective and reparative effects, including remyelination, whereas solTNF signals predominantly via TNFR1 Citation: Desu, H.L.; Illiano, P.; Choi, promoting neurotoxicity.
    [Show full text]
  • Anti-Proteasome 20S LMP2 Antibody (ARG41082)
    Product datasheet [email protected] ARG41082 Package: 100 μl anti-Proteasome 20S LMP2 antibody Store at: -20°C Summary Product Description Rabbit Polyclonal antibody recognizes Proteasome 20S LMP2 Tested Reactivity Hu Predict Reactivity Ms, Rat Tested Application FACS, ICC/IF, WB Host Rabbit Clonality Polyclonal Isotype IgG Target Name Proteasome 20S LMP2 Antigen Species Human Immunogen Synthetic peptide derived from Human Proteasome 20S LMP2. Conjugation Un-conjugated Alternate Names beta1i; Proteasome subunit beta type-9; Really interesting new gene 12 protein; Proteasome chain 7; Multicatalytic endopeptidase complex chain 7; Proteasome subunit beta-1i; Macropain chain 7; RING12; EC 3.4.25.1; LMP2; PSMB6i; Low molecular mass protein 2 Application Instructions Application table Application Dilution FACS 1:50 ICC/IF 1:50 - 1:200 WB 1:1000 - 1:5000 Application Note * The dilutions indicate recommended starting dilutions and the optimal dilutions or concentrations should be determined by the scientist. Calculated Mw 23 kDa Observed Size 23 kDa Properties Form Liquid Purification Affinity purified. Buffer PBS (pH 7.4), 150 mM NaCl, 0.02% Sodium azide and 50% Glycerol. Preservative 0.02% Sodium azide Stabilizer 50% Glycerol www.arigobio.com 1/2 Storage instruction For continuous use, store undiluted antibody at 2-8°C for up to a week. For long-term storage, aliquot and store at -20°C. Storage in frost free freezers is not recommended. Avoid repeated freeze/thaw cycles. Suggest spin the vial prior to opening. The antibody solution should be gently mixed before use. Note For laboratory research only, not for drug, diagnostic or other use. Bioinformation Gene Symbol PSMB9 Gene Full Name proteasome subunit beta 9 Background The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure.
    [Show full text]
  • 13207 PSMB7 (E1L5H) Rabbit Mab
    Revision 1 C 0 2 - t PSMB7 (E1L5H) Rabbit mAb a e r o t S Orders: 877-616-CELL (2355) [email protected] 7 Support: 877-678-TECH (8324) 0 2 Web: [email protected] 3 www.cellsignal.com 1 # 3 Trask Lane Danvers Massachusetts 01923 USA For Research Use Only. Not For Use In Diagnostic Procedures. Applications: Reactivity: Sensitivity: MW (kDa): Source/Isotype: UniProt ID: Entrez-Gene Id: WB H M Mk Endogenous 28, 30 Rabbit IgG Q99436 5695 g p y ( ) Product Usage Information antigen presentation, the constitutively expressed PSMB6, PSMB7, and PSMB5 subunits are replaced by three highly homologous, induced β-subunits to form the Application Dilution immunoproteasome (4,5). PSMB7 is downregulated at the protein level by IFN-γ and replaced by PSMB10 to remodel the proteolytic specificity of the proteasome for more Western Blotting 1:1000 appropriate immunological processing of endogenous antigens (6). Research studies show that PSMB7 expression is upregulated in human colon adenocarcinomas and suggest that Storage high PSMB7 expression may serve as a potential prognostic marker in breast cancer (7,8). Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA, 50% 1. Finley, D. (2009) Annu Rev Biochem 78, 477-513. glycerol and less than 0.02% sodium azide. Store at –20°C. Do not aliquot the antibody. 2. Lee, M.J. et al. (2011) Mol Cell Proteomics 10, R110.003871. 3. Stringer, J.R. et al. (1977) J Virol 21, 889-901. Specificity / Sensitivity 4. Boes, B. et al. (1994) J Exp Med 179, 901-9.
    [Show full text]
  • Transcriptome Analysis Reveals Possible Immunomodulatory Activity Mechanism of Chlorella Sp
    marine drugs Article Transcriptome Analysis Reveals Possible Immunomodulatory Activity Mechanism of Chlorella sp. Exopolysaccharides on RAW264.7 Macrophages Siwei Wu, Hongquan Liu * , Siyu Li, Han Sun, Xiumiao He, Ying Huang and Han Long Guangxi Key Laboratory for Polysaccharide Materials and Modifications, School of Marine and Biotechnology, GuangXi University for Nationalities, Nanning 530006, China; [email protected] (S.W.); [email protected] (S.L.); [email protected] (H.S.); [email protected] (X.H.); [email protected] (Y.H.); [email protected] (H.L.) * Correspondence: [email protected] Abstract: In this study, the exopolysaccharides of Chlorella sp. (CEP) were isolated to obtain the purified fraction CEP4. Characterization results showed that CEP4 was a sulfated heteropolysaccha- ride. The main monosaccharide components of CEP4 are glucosamine hydrochloride (40.8%) and glucuronic acid (21.0%). The impact of CEP4 on the immune activity of RAW264.7 macrophage cy- tokines was detected, and the results showed that CEP4 induced the production of nitric oxide (NO), TNF-α, and IL-6 in a dose-dependent pattern within a range of 6 µg/mL. A total of 4824 differentially expressed genes (DEGs) were obtained from the results of RNA-seq. Gene enrichment analysis showed that immune-related genes such as NFKB1, IL-6, and IL-1b were significantly upregulated, while the genes RIPK1 and TLR4 were significantly downregulated. KEGG pathway enrichment analysis showed that DEGs were significantly enriched in immune-related biological processes, Citation: Wu, S.; Liu, H.; Li, S.; including toll-like receptor (TLR) signaling pathway, cytosolic DNA-sensing pathway, and C-type Sun, H.; He, X.; Huang, Y.; Long, H.
    [Show full text]
  • The Kinesin Spindle Protein Inhibitor Filanesib Enhances the Activity of Pomalidomide and Dexamethasone in Multiple Myeloma
    Plasma Cell Disorders SUPPLEMENTARY APPENDIX The kinesin spindle protein inhibitor filanesib enhances the activity of pomalidomide and dexamethasone in multiple myeloma Susana Hernández-García, 1 Laura San-Segundo, 1 Lorena González-Méndez, 1 Luis A. Corchete, 1 Irena Misiewicz- Krzeminska, 1,2 Montserrat Martín-Sánchez, 1 Ana-Alicia López-Iglesias, 1 Esperanza Macarena Algarín, 1 Pedro Mogollón, 1 Andrea Díaz-Tejedor, 1 Teresa Paíno, 1 Brian Tunquist, 3 María-Victoria Mateos, 1 Norma C Gutiérrez, 1 Elena Díaz- Rodriguez, 1 Mercedes Garayoa 1* and Enrique M Ocio 1* 1Centro Investigación del Cáncer-IBMCC (CSIC-USAL) and Hospital Universitario-IBSAL, Salamanca, Spain; 2National Medicines Insti - tute, Warsaw, Poland and 3Array BioPharma, Boulder, Colorado, USA *MG and EMO contributed equally to this work ©2017 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol. 2017.168666 Received: March 13, 2017. Accepted: August 29, 2017. Pre-published: August 31, 2017. Correspondence: [email protected] MATERIAL AND METHODS Reagents and drugs. Filanesib (F) was provided by Array BioPharma Inc. (Boulder, CO, USA). Thalidomide (T), lenalidomide (L) and pomalidomide (P) were purchased from Selleckchem (Houston, TX, USA), dexamethasone (D) from Sigma-Aldrich (St Louis, MO, USA) and bortezomib from LC Laboratories (Woburn, MA, USA). Generic chemicals were acquired from Sigma Chemical Co., Roche Biochemicals (Mannheim, Germany), Merck & Co., Inc. (Darmstadt, Germany). MM cell lines, patient samples and cultures. Origin, authentication and in vitro growth conditions of human MM cell lines have already been characterized (17, 18). The study of drug activity in the presence of IL-6, IGF-1 or in co-culture with primary bone marrow mesenchymal stromal cells (BMSCs) or the human mesenchymal stromal cell line (hMSC–TERT) was performed as described previously (19, 20).
    [Show full text]
  • Expression of Immunoproteasome Genes Is Regulated by Cell-Intrinsic
    www.nature.com/scientificreports OPEN Expression of immunoproteasome genes is regulated by cell-intrinsic and –extrinsic factors in human Received: 06 April 2016 Accepted: 06 September 2016 cancers Published: 23 September 2016 Alexandre Rouette1,2,*, Assya Trofimov1,2,3,*, David Haberl1, Geneviève Boucher1, Vincent-Philippe Lavallée1,2,4,5, Giovanni D’Angelo4,5, Josée Hébert1,2,4,5, Guy Sauvageau1,2,4,5, Sébastien Lemieux1,3 & Claude Perreault1,2,4 Based on transcriptomic analyses of thousands of samples from The Cancer Genome Atlas, we report that expression of constitutive proteasome (CP) genes (PSMB5, PSMB6, PSMB7) and immunoproteasome (IP) genes (PSMB8, PSMB9, PSMB10) is increased in most cancer types. In breast cancer, expression of IP genes was determined by the abundance of tumor infiltrating lymphocytes and high expression of IP genes was associated with longer survival. In contrast, IP upregulation in acute myeloid leukemia (AML) was a cell-intrinsic feature that was not associated with longer survival. Expression of IP genes in AML was IFN-independent, correlated with the methylation status of IP genes, and was particularly high in AML with an M5 phenotype and/or MLL rearrangement. Notably, PSMB8 inhibition led to accumulation of polyubiquitinated proteins and cell death in IPhigh but not IPlow AML cells. Co-clustering analysis revealed that genes correlated with IP subunits in non-M5 AMLs were primarily implicated in immune processes. However, in M5 AML, IP genes were primarily co-regulated with genes involved in cell metabolism and proliferation, mitochondrial activity and stress responses. We conclude that M5 AML cells can upregulate IP genes in a cell-intrinsic manner in order to resist cell stress.
    [Show full text]
  • Shinydepmap, a Tool to Identify Targetable Cancer Genes and Their Functional Connections from Cancer Dependency Map Data
    TOOLS AND RESOURCES shinyDepMap, a tool to identify targetable cancer genes and their functional connections from Cancer Dependency Map data Kenichi Shimada*, John A Bachman, Jeremy L Muhlich, Timothy J Mitchison Laboratory of Systems Pharmacology and Department of Systems Biology, Harvard Medical School, Boston, United States Abstract Individual cancers rely on distinct essential genes for their survival. The Cancer Dependency Map (DepMap) is an ongoing project to uncover these gene dependencies in hundreds of cancer cell lines. To make this drug discovery resource more accessible to the scientific community, we built an easy-to-use browser, shinyDepMap (https://labsyspharm.shinyapps.io/ depmap). shinyDepMap combines CRISPR and shRNA data to determine, for each gene, the growth reduction caused by knockout/knockdown and the selectivity of this effect across cell lines. The tool also clusters genes with similar dependencies, revealing functional relationships. shinyDepMap can be used to (1) predict the efficacy and selectivity of drugs targeting particular genes; (2) identify maximally sensitive cell lines for testing a drug; (3) target hop, that is, navigate from an undruggable protein with the desired selectivity profile, such as an activated oncogene, to more druggable targets with a similar profile; and (4) identify novel pathways driving cancer cell growth and survival. *For correspondence: [email protected]. Introduction edu Cancer is a disease of the genome. Hundreds, if not thousands, of driver mutations cause cancer in different patients (MC3 Working Group et al., 2018), and extensive collaborative efforts such as Competing interest: See the Cancer Genome Atlas Program (TCGA) have helped discover them (The Cancer Genome Atlas page 17 Research Network, 2019).
    [Show full text]