Carnivorous Plant Newsletter V46 N4, December 2017
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Toward a Resolution of Campanulid Phylogeny, with Special Reference to the Placement of Dipsacales
TAXON 57 (1) • February 2008: 53–65 Winkworth & al. • Campanulid phylogeny MOLECULAR PHYLOGENETICS Toward a resolution of Campanulid phylogeny, with special reference to the placement of Dipsacales Richard C. Winkworth1,2, Johannes Lundberg3 & Michael J. Donoghue4 1 Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Caixa Postal 11461–CEP 05422-970, São Paulo, SP, Brazil. [email protected] (author for correspondence) 2 Current address: School of Biology, Chemistry, and Environmental Sciences, University of the South Pacific, Private Bag, Laucala Campus, Suva, Fiji 3 Department of Phanerogamic Botany, The Swedish Museum of Natural History, Box 50007, 104 05 Stockholm, Sweden 4 Department of Ecology & Evolutionary Biology and Peabody Museum of Natural History, Yale University, P.O. Box 208106, New Haven, Connecticut 06520-8106, U.S.A. Broad-scale phylogenetic analyses of the angiosperms and of the Asteridae have failed to confidently resolve relationships among the major lineages of the campanulid Asteridae (i.e., the euasterid II of APG II, 2003). To address this problem we assembled presently available sequences for a core set of 50 taxa, representing the diver- sity of the four largest lineages (Apiales, Aquifoliales, Asterales, Dipsacales) as well as the smaller “unplaced” groups (e.g., Bruniaceae, Paracryphiaceae, Columelliaceae). We constructed four data matrices for phylogenetic analysis: a chloroplast coding matrix (atpB, matK, ndhF, rbcL), a chloroplast non-coding matrix (rps16 intron, trnT-F region, trnV-atpE IGS), a combined chloroplast dataset (all seven chloroplast regions), and a combined genome matrix (seven chloroplast regions plus 18S and 26S rDNA). Bayesian analyses of these datasets using mixed substitution models produced often well-resolved and supported trees. -
Edition 2 from Forest to Fjaeldmark the Vegetation Communities Highland Treeless Vegetation
Edition 2 From Forest to Fjaeldmark The Vegetation Communities Highland treeless vegetation Richea scoparia Edition 2 From Forest to Fjaeldmark 1 Highland treeless vegetation Community (Code) Page Alpine coniferous heathland (HCH) 4 Cushion moorland (HCM) 6 Eastern alpine heathland (HHE) 8 Eastern alpine sedgeland (HSE) 10 Eastern alpine vegetation (undifferentiated) (HUE) 12 Western alpine heathland (HHW) 13 Western alpine sedgeland/herbland (HSW) 15 General description Rainforest and related scrub, Dry eucalypt forest and woodland, Scrub, heathland and coastal complexes. Highland treeless vegetation communities occur Likewise, some non-forest communities with wide within the alpine zone where the growth of trees is environmental amplitudes, such as wetlands, may be impeded by climatic factors. The altitude above found in alpine areas. which trees cannot survive varies between approximately 700 m in the south-west to over The boundaries between alpine vegetation communities are usually well defined, but 1 400 m in the north-east highlands; its exact location depends on a number of factors. In many communities may occur in a tight mosaic. In these parts of Tasmania the boundary is not well defined. situations, mapping community boundaries at Sometimes tree lines are inverted due to exposure 1:25 000 may not be feasible. This is particularly the or frost hollows. problem in the eastern highlands; the class Eastern alpine vegetation (undifferentiated) (HUE) is used in There are seven specific highland heathland, those areas where remote sensing does not provide sedgeland and moorland mapping communities, sufficient resolution. including one undifferentiated class. Other highland treeless vegetation such as grasslands, herbfields, A minor revision in 2017 added information on the grassy sedgelands and wetlands are described in occurrence of peatland pool complexes, and other sections. -
Plant Life of Western Australia
INTRODUCTION The characteristic features of the vegetation of Australia I. General Physiography At present the animals and plants of Australia are isolated from the rest of the world, except by way of the Torres Straits to New Guinea and southeast Asia. Even here adverse climatic conditions restrict or make it impossible for migration. Over a long period this isolation has meant that even what was common to the floras of the southern Asiatic Archipelago and Australia has become restricted to small areas. This resulted in an ever increasing divergence. As a consequence, Australia is a true island continent, with its own peculiar flora and fauna. As in southern Africa, Australia is largely an extensive plateau, although at a lower elevation. As in Africa too, the plateau increases gradually in height towards the east, culminating in a high ridge from which the land then drops steeply to a narrow coastal plain crossed by short rivers. On the west coast the plateau is only 00-00 m in height but there is usually an abrupt descent to the narrow coastal region. The plateau drops towards the center, and the major rivers flow into this depression. Fed from the high eastern margin of the plateau, these rivers run through low rainfall areas to the sea. While the tropical northern region is characterized by a wet summer and dry win- ter, the actual amount of rain is determined by additional factors. On the mountainous east coast the rainfall is high, while it diminishes with surprising rapidity towards the interior. Thus in New South Wales, the yearly rainfall at the edge of the plateau and the adjacent coast often reaches over 100 cm. -
Paleoecology of Late Quaternary Deposits in Chiloe Continental, Chile
Revista Chilena de Historia Natural 65:235-245,1992 Paleoecology of Late Quaternary Deposits in Chiloe Continental, Chile Paleoecología de los dep6sitos del Cuaternario tardio en Chiloe Continental, Chile 1 2 3 CALVIN J. HEUSSER , LINDA E. HEUSSER and ARTURO HAUSER 1 Clinton Woods, Tuxedo, New York 10987, USA. 2 Lamont-Doherty Geological Observatory of Columbia University, Palisades, New York 10964, USA. 3 Servicio Nacional de Geologia y Mineria, Casilla 10465, Santiago, Chile. ABSTRACT Two stratigraphic records of the late Quaternary vegetation and paleoenvironmental setting of Chiloe Continental, heretofore unstudied, are from (1) a 7.2 m deposit of mire peat at Cuesta Moraga (43025's), dated at 12,310 yr B.P. and interrupted by multiple tephra layers, resting on glacial drift, and (2) a 3-m road cut near Chaiten (42°54'S), 75 km north of Cuesta Moraga, containing a peat bed with wood, dated 11,850 yr B.P., underlying a thick tephra layer and overlying drift. Records are of fossil pollen, spores, and matrix macroremains, loss on ignition, lithology, and ra- diocarbon chronology. There is throughout in the data no indication of fire in predominantly Nothofagus forest com- munities, which during the late-glacial at Chaiten contained, among other tree species, Drimys, Pseudopanax, and Po- docarpus. At Cuesta Moraga, where the forest was relatively open and continued to be open during the Holocene, late- glacial ground cover of Empetrum, Gunnera, and polypodiaceous ferns was supplanted on the mire largely by mi- nerotrophic Cyperaceae until about 8,000 yr B.P.; later, especially after 5,000 yr B.P., ombrotrophic cushion plants, notably Astelia, Donatia, and Tetroncium, with Dacrydium, proliferated on the surface of the mire. -
University of Groningen Fen Mires with Cushion Plants in Bale
University of Groningen Fen Mires with cushion plants in Bale Mountains, Ethiopia Dullo, B.W.; Grootjans, A. P.; Roelofs, J.G.M; Senbeta, A.F.; Fritz, C. Published in: Mires and Peat IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below. Document Version Publisher's PDF, also known as Version of record Publication date: 2015 Link to publication in University of Groningen/UMCG research database Citation for published version (APA): Dullo, B. W., Grootjans, A. P., Roelofs, J. G. M., Senbeta, A. F., & Fritz, C. (2015). Fen Mires with cushion plants in Bale Mountains, Ethiopia. Mires and Peat, 15, 1-10. [UNSP 07]. http://mires-and- peat.net/pages/volumes/map15/map1507.php Copyright Other than for strictly personal use, it is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), unless the work is under an open content license (like Creative Commons). The publication may also be distributed here under the terms of Article 25fa of the Dutch Copyright Act, indicated by the “Taverne” license. More information can be found on the University of Groningen website: https://www.rug.nl/library/open-access/self-archiving-pure/taverne- amendment. Take-down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Downloaded from the University of Groningen/UMCG research database (Pure): http://www.rug.nl/research/portal. -
Biogeography of the Monocotyledon Astelioid Clade (Asparagales): a History of Long-Distance Dispersal and Diversification with Emerging Habitats
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2021 Biogeography of the monocotyledon astelioid clade (Asparagales): A history of long-distance dispersal and diversification with emerging habitats Birch, Joanne L ; Kocyan, Alexander Abstract: The astelioid families (Asteliaceae, Blandfordiaceae, Boryaceae, Hypoxidaceae, and Lanari- aceae) have centers of diversity in Australasia and temperate Africa, with secondary centers of diversity in Afromontane Africa, Asia, and Pacific Islands. The global distribution of these families makes this an excellent lineage to test if current distribution patterns are the result of vicariance or long-distance dispersal and to evaluate the roles of tertiary climatic and geological drivers in lineage diversification. Sequence data were generated from five chloroplast regions (petL-psbE, rbcL, rps16-trnK, trnL-trnLF, trnS-trnSG) for 104 ingroup species sampled across global diversity. The astelioid phylogeny was inferred using maximum parsimony, maximum likelihood, and Bayesian inference methods. Divergence dates were estimated with a relaxed clock applied in BEAST. Ancestral ranges were reconstructed in ’BioGeoBEARS’ applying the corrected Akaike information criterion to test for the best-fit biogeographic model. Diver- sification rates were estimated in Bayesian Analysis of Macroevolutionary Mixtures [BAMM]. Astelioid relationships were inferred as Boryaceae(Blandfordiaceae(Asteliaceae(Hypoxidaceae plus Lanariaceae))). The crown astelioid node was dated to the Late Cretaceous (75.2 million years; 95% highest posterior densities interval 61.0-90.0 million years) with an inferred Eastern Gondwanan origin. However, aste- lioid speciation events have not been shaped by Gondwanan vicariance. Rather long-distance dispersal since the Eocene is inferred to account for current distributions. -
Literaturverzeichnis
Literaturverzeichnis Abaimov, A.P., 2010: Geographical Distribution and Ackerly, D.D., 2009: Evolution, origin and age of Genetics of Siberian Larch Species. In Osawa, A., line ages in the Californian and Mediterranean flo- Zyryanova, O.A., Matsuura, Y., Kajimoto, T. & ras. Journal of Biogeography 36, 1221–1233. Wein, R.W. (eds.), Permafrost Ecosystems. Sibe- Acocks, J.P.H., 1988: Veld Types of South Africa. 3rd rian Larch Forests. Ecological Studies 209, 41–58. Edition. Botanical Research Institute, Pretoria, Abbadie, L., Gignoux, J., Le Roux, X. & Lepage, M. 146 pp. (eds.), 2006: Lamto. Structure, Functioning, and Adam, P., 1990: Saltmarsh Ecology. Cambridge Uni- Dynamics of a Savanna Ecosystem. Ecological Stu- versity Press. Cambridge, 461 pp. dies 179, 415 pp. Adam, P., 1994: Australian Rainforests. Oxford Bio- Abbott, R.J. & Brochmann, C., 2003: History and geography Series No. 6 (Oxford University Press), evolution of the arctic flora: in the footsteps of Eric 308 pp. Hultén. Molecular Ecology 12, 299–313. Adam, P., 1994: Saltmarsh and mangrove. In Groves, Abbott, R.J. & Comes, H.P., 2004: Evolution in the R.H. (ed.), Australian Vegetation. 2nd Edition. Arctic: a phylogeographic analysis of the circu- Cambridge University Press, Melbourne, pp. marctic plant Saxifraga oppositifolia (Purple Saxi- 395–435. frage). New Phytologist 161, 211–224. Adame, M.F., Neil, D., Wright, S.F. & Lovelock, C.E., Abbott, R.J., Chapman, H.M., Crawford, R.M.M. & 2010: Sedimentation within and among mangrove Forbes, D.G., 1995: Molecular diversity and deri- forests along a gradient of geomorphological set- vations of populations of Silene acaulis and Saxi- tings. -
Phylogeny and Phylogenetic Nomenclature of the Campanulidae Based on an Expanded Sample of Genes and Taxa
Systematic Botany (2010), 35(2): pp. 425–441 © Copyright 2010 by the American Society of Plant Taxonomists Phylogeny and Phylogenetic Nomenclature of the Campanulidae based on an Expanded Sample of Genes and Taxa David C. Tank 1,2,3 and Michael J. Donoghue 1 1 Peabody Museum of Natural History & Department of Ecology & Evolutionary Biology, Yale University, P. O. Box 208106, New Haven, Connecticut 06520 U. S. A. 2 Department of Forest Resources & Stillinger Herbarium, College of Natural Resources, University of Idaho, P. O. Box 441133, Moscow, Idaho 83844-1133 U. S. A. 3 Author for correspondence ( [email protected] ) Communicating Editor: Javier Francisco-Ortega Abstract— Previous attempts to resolve relationships among the primary lineages of Campanulidae (e.g. Apiales, Asterales, Dipsacales) have mostly been unconvincing, and the placement of a number of smaller groups (e.g. Bruniaceae, Columelliaceae, Escalloniaceae) remains uncertain. Here we build on a recent analysis of an incomplete data set that was assembled from the literature for a set of 50 campanulid taxa. To this data set we first added newly generated DNA sequence data for the same set of genes and taxa. Second, we sequenced three additional cpDNA coding regions (ca. 8,000 bp) for the same set of 50 campanulid taxa. Finally, we assembled the most comprehensive sample of cam- panulid diversity to date, including ca. 17,000 bp of cpDNA for 122 campanulid taxa and five outgroups. Simply filling in missing data in the 50-taxon data set (rendering it 94% complete) resulted in a topology that was similar to earlier studies, but with little additional resolution or confidence. -
Review of the Sporoderm Ultrastructure of Members of the Asterales S
ISSN 0031-0301, Paleontological Journal, 2006, Vol. 40, Suppl. 5, pp. S656–S663. © Pleiades Publishing, Inc., 2006. Review of the Sporoderm Ultrastructure of Members of the Asterales S. V. Polevova Biological Faculty, Moscow State University, Leninskie gory 1, Moscow, 119992 Russia e-mail: [email protected] Received March 23, 2006 Abstract—Palynomorphological characteristics of the order Asterales are discussed. Particular attention is paid to the pollen morphology of basal families of this group and to that of problematic taxa that are considered as sister groups to the group under study. Ultrastructurally similar sporoderms of several families, including (1) Asteraceae, Calyceraceae, and Goodeniaceae; (2) Campanulaceae, Phellinaceae, and Menyanthaceae; (3) Rousseaceae, Abrophyllaceae, and Columelliaceae, are described. Pollen grains of Alseuosmiaceae and Stylidiaceae show unique ultrastructural features of the exine. DOI: 10.1134/S0031030106110128 Key words: Asterales, pollen grains, ultrastructure, phylogenetic systematics. INTRODUCTION MATERIAL AND METHODS At different times, concepts of the group of Aster- Pollen grains of 18 members of 12 families were aceae and its relatives has been considered to include studied. The material was received from the herbarium different families. These variants concerned a distinct of Komarov Botanical Institution of the Russian Acad- circle of taxa. Thus, the system of Takhatajan (1997) emy of Sciences, St. Petersburg. included the subclass Asteridae with 14 families; the (1) Family Goodeniaceae: Brunonia australis system of Thorne (2000) included the suborder Astera- R. Brown and Dampiera eriocephala Vriese. nae with nine families. (2) Family Columelliaceae: Columellia sericea Recently, relationships of Asteraceae have been sig- F.A. Humbolt, A.J.A. Bonpland et C.S. -
Phylogenetics of Asterids Based on 3 Coding and 3 Non-Coding Chloroplast DNA Markers and the Utility of Non-Coding DNA at Higher Taxonomic Levels
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 24 (2002) 274–301 www.academicpress.com Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast DNA markers and the utility of non-coding DNA at higher taxonomic levels Birgitta Bremer,a,e,* Kaare Bremer,a Nahid Heidari,a Per Erixon,a Richard G. Olmstead,b Arne A. Anderberg,c Mari Kaallersj€ oo,€ d and Edit Barkhordariana a Department of Systematic Botany, Evolutionary Biology Centre, Norbyva€gen 18D, SE-752 36 Uppsala, Sweden b Department of Botany, University of Washington, P.O. Box 355325, Seattle, WA, USA c Department of Phanerogamic Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden d Laboratory for Molecular Systematics, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden e The Bergius Foundation at the Royal Swedish Academy of Sciences, P.O. Box 50017, SE-104 05 Stockholm, Sweden Received 25 September 2001; received in revised form 4 February 2002 Abstract Asterids comprise 1/4–1/3 of all flowering plants and are classified in 10 orders and >100 families. The phylogeny of asterids is here explored with jackknife parsimony analysis of chloroplast DNA from 132 genera representing 103 families and all higher groups of asterids. Six different markers were used, three of the markers represent protein coding genes, rbcL, ndhF, and matK, and three other represent non-coding DNA; a region including trnL exons and the intron and intergenic spacers between trnT (UGU) to trnF (GAA); another region including trnV exons and intron, trnM and intergenic spacers between trnV (UAC) and atpE, and the rps16 intron. -
FILOGENIA E BIOGEOGRAFIA DE DROSERACEAE INFERIDAS a PARTIR DE CARACTERES MORFOLÓGICOS E MOLECULARES (18S, Atpb, Matk, Rbcl E ITS)
FILOGENIA E BIOGEOGRAFIA DE DROSERACEAE INFERIDAS A PARTIR DE CARACTERES MORFOLÓGICOS E MOLECULARES (18S, atpB, matK, rbcL e ITS) VITOR FERNANDES OLIVEIRA DE MIRANDA Tese apresentada ao Instituto de Biociências da Universidade Estadual Paulista “Julio de Mesquita Filho”, Campus de Rio Claro, para a obtenção do título de Doutor em Ciências Biológicas (Área de Concentração: Biologia Vegetal) Rio Claro Estado de São Paulo – Brasil Abril de 2.006 FILOGENIA E BIOGEOGRAFIA DE DROSERACEAE INFERIDAS A PARTIR DE CARACTERES MORFOLÓGICOS E MOLECULARES (18S, atpB, matK, rbcL e ITS) VITOR FERNANDES OLIVEIRA DE MIRANDA Orientador: Prof. Dr. ANTONIO FURLAN Co-orientador: Prof. Dr. MAURÍCIO BACCI JÚNIOR Tese apresentada ao Instituto de Biociências da Universidade Estadual Paulista “Julio de Mesquita Filho”, Campus de Rio Claro, para a obtenção do título de Doutor em Ciências Biológicas (Área de Concentração: Biologia Vegetal) Rio Claro Estado de São Paulo – Brasil Abril de 2.006 582 Miranda, Vitor Fernandes Oliveira de M672f Filogenia e biogeografia de Droseraceae inferidas a partir de caracteres morfológicos e moleculares (18S, atpB, matK, rbcL e ITS) / Vitor Fernandes Oliveira de Miranda. – Rio Claro : [s.n.], 2006 132 f. : il., figs., tabs., fots. Tese (doutorado) – Universidade Estadual Paulista, Institu- to de Biociências de Rio Claro Orientador: Antonio Furlan Co-orientador: Mauricio Bacci Junior 1. Botânica – Classificação. 2. Botânica sistemática molecu- lar. 3. Aldrovanda. 4. Dionaea. 5. Drosera. 6. DNA. I. Título. Ficha Catalográfica elaborada pela STATI – Biblioteca da UNESP Campus de Rio Claro/SP iv Agradecimentos Ao Prof. Furlan por sua sabedoria, por toda a sua paciência, por toda a sua compreensão, que sempre soube me ouvir e sempre me viu, acima de tudo, como pessoa. -
Phylogenetic Studies in the Euasterids II
Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 676 _____________________________ _____________________________ Phylogenetic Studies in the Euasterids II with Particular Reference to Asterales and Escalloniaceae BY JOHANNES LUNDBERG ACTA UNIVERSITATIS UPSALIENSIS UPPSALA 2001 Dissertation for the Degree of Doctor of Philosophy in Systematic Botany presented at Uppsala University in 2002 Abstract Lundberg, J. 2001. Phylogenetic studies in the Euasterids II with particular reference to Asterales and Escalloniaceae. Acta Univ. Ups. Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 676. 38 pp. Uppsala. ISBN 91-554-5191-8. The present study is concerned with the evolutionary relationships among the Euasterids II, a group of angiosperms that includes the orders Apiales, Aquifoliales, Asterales, and Dipsacales together with several small, poorly known families yet unplaced as to order. Parsimony analysis of nucleotide sequence data from the chloroplast genes atpB, ndhF and rbcL together with morphological data are used to construct a phylogeny of the order Asterales, which in the present sense includes 11 families and more than 26 000 species. It is argued that Rousseaceae should be expanded to include also Carpodetaceae (and thus contain four genera), and that Donatia should be re-merged with Stylidiaceae. The present study also strongly supports that the sister taxon to the largest plant family, Asteraceae (Compositae), is the small South American Calyceraceae. A new addition to Asterales is Platyspermation (formerly in Escalloniaceae). Using the recently developed Bayesian approach to phylogenetic reconstruction, in combination with a dataset consisting of the atpB, ndhF and rbcL nucleotide sequences, a resolved and fairly well supported phylogeny of the Euasterids II was reconstructed.