Adaptive Coarse Space Selection in BDDC and FETI-DP Iterative Substructuring Methods: Towards Fast and Robust Solvers Jan Mandel
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Newton-Krylov-BDDC Solvers for Nonlinear Cardiac Mechanics
Newton-Krylov-BDDC solvers for nonlinear cardiac mechanics Item Type Article Authors Pavarino, L.F.; Scacchi, S.; Zampini, Stefano Citation Newton-Krylov-BDDC solvers for nonlinear cardiac mechanics 2015 Computer Methods in Applied Mechanics and Engineering Eprint version Post-print DOI 10.1016/j.cma.2015.07.009 Publisher Elsevier BV Journal Computer Methods in Applied Mechanics and Engineering Rights NOTICE: this is the author’s version of a work that was accepted for publication in Computer Methods in Applied Mechanics and Engineering. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Computer Methods in Applied Mechanics and Engineering, 18 July 2015. DOI:10.1016/ j.cma.2015.07.009 Download date 07/10/2021 05:34:35 Link to Item http://hdl.handle.net/10754/561071 Accepted Manuscript Newton-Krylov-BDDC solvers for nonlinear cardiac mechanics L.F. Pavarino, S. Scacchi, S. Zampini PII: S0045-7825(15)00221-2 DOI: http://dx.doi.org/10.1016/j.cma.2015.07.009 Reference: CMA 10661 To appear in: Comput. Methods Appl. Mech. Engrg. Received date: 13 December 2014 Revised date: 3 June 2015 Accepted date: 8 July 2015 Please cite this article as: L.F. Pavarino, S. Scacchi, S. Zampini, Newton-Krylov-BDDC solvers for nonlinear cardiac mechanics, Comput. Methods Appl. Mech. Engrg. (2015), http://dx.doi.org/10.1016/j.cma.2015.07.009 This is a PDF file of an unedited manuscript that has been accepted for publication. -
Phd Thesis, Universit´Elibre De Bruxelles, Chauss´Eede Waterloo, 72, 1640 Rhode- St-Gen`Ese,Belgium, 2004
Universit´eLibre de Bruxelles von Karman Institute for Fluid Dynamics Aeronautics and Aerospace Department PhD. Thesis Algorithmic Developments for a Multiphysics Framework Thomas Wuilbaut Promoter: Prof. Herman Deconinck Contact information: Thomas Wuilbaut von Karman Institute for Fluid Dynamics 72 Chauss´eede Waterloo 1640 Rhode-St-Gen`ese BELGIUM email: [email protected] webpage: http://www.vki.ac.be/~wuilbaut To Olivia and her wonderful mother... Summary v Summary In this doctoral work, we adress various problems arising when dealing with multi-physical simulations using a segregated (non-monolithic) approach. We concentrate on a few specific problems and focus on the solution of aeroelastic flutter for linear elastic structures in compressible flows, conju- gate heat transfer for re-entry vehicles including thermo-chemical reactions and finally, industrial electro-chemical plating processes which often include stiff source terms. These problems are often solved using specifically devel- oped solvers, but these cannot easily be reused for different purposes. We have therefore considered the development of a flexible and reusable software platform for the simulation of multi-physics problems. We have based this development on the COOLFluiD framework developed at the von Karman Institute in collaboration with a group of partner institutions. For the solution of fluid flow problems involving compressible flows, we have used the Finite Volume method and we have focused on the applica- tion of the method to moving and deforming computational domains using the Arbitrary Lagrangian Eulerian formulation. Validation on a series of testcases (including turbulence) is shown. In parallel, novel time integration methods have been derived from two popular time discretization methods. -
Multigrid and Saddle-Point Preconditioners for Unfitted Finite
Multigrid and saddle-point preconditioners for unfitted finite element modelling of inclusions Hardik Kothari∗and Rolf Krause† Institute of Computational Science, Universit`adella Svizzera italiana, Lugano, Switzerland February 17, 2021 Abstract In this work, we consider the modeling of inclusions in the material using an unfitted finite element method. In the unfitted methods, structured background meshes are used and only the underlying finite element space is modified to incorporate the discontinuities, such as inclusions. Hence, the unfitted methods provide a more flexible framework for modeling the materials with multiple inclusions. We employ the method of Lagrange multipliers for enforcing the interface conditions between the inclusions and matrix, this gives rise to the linear system of equations of saddle point type. We utilize the Uzawa method for solving the saddle point system and propose preconditioning strategies for primal and dual systems. For the dual systems, we review and compare the preconditioning strategies that are developed for FETI and SIMPLE methods. While for the primal system, we employ a tailored multigrid method specifically developed for the unfitted meshes. Lastly, the comparison between the proposed preconditioners is made through several numerical experiments. Keywords: Unfitted finite element method, multigrid method, saddle-point problem 1 Introduction In the modeling of many real-world engineering problems, we encounter material discontinuities, such as inclusions. The inclusions are found naturally in the materials, or can be artificially introduced to produce desired mechanical behavior. The finite element (FE) modeling of such inclusions requires to generate meshes that can resolve the interface between the matrix and inclusions, which can be a computationally cumbersome and expensive task. -
Méthode De Décomposition De Domaine Avec Adaptation De
UNIVERSIT E´ PARIS 13 No attribu´epar la biblioth`eque TH ESE` pour obtenir le grade de DOCTEUR DE L’UNIVERSIT E´ PARIS 13 Discipline: Math´ematiques Appliqu´ees Laboratoire d’accueil: ONERA - Le centre fran¸cais de recherche a´erospatiale Pr´esent´ee et soutenue publiquement le 19 d´ecembre 2014 par Oana Alexandra CIOBANU Titre M´ethode de d´ecomposition de domaine avec adaptation de maillage en espace-temps pour les ´equations d’Euler et de Navier–Stokes devant le jury compos´ede: Fran¸cois Dubois Rapporteur Laurence Halpern Directrice de th`ese Rapha`ele Herbin Rapporteure Xavier Juvigny Examinateur Olivier Lafitte Examinateur Juliette Ryan Encadrante UNIVERSITY PARIS 13 THESIS Presented for the degree of DOCTEUR DE L’UNIVERSIT E´ PARIS 13 In Applied Mathematics Hosting laboratory: ONERA - The French Aerospace Lab presented for public discussion on 19 decembre 2014 by Oana Alexandra CIOBANU Subject Adaptive Space-Time Domain Decomposition Methods for Euler and Navier–Stokes Equations Jury: Fran¸cois Dubois Reviewer Laurence Halpern Supervisor Rapha`ele Herbin Reviewer Xavier Juvigny Examiner Olivier Lafitte Examiner Juliette Ryan Supervisor newpage Remerciements Tout d’abord, je remercie grandement Juliette Ryan pour avoir accept´e d’ˆetre mon encad- rante de stage puis mon encadrante de th`ese. Pendant plus de trois ans, elle m’a fait d´ecouvrir mon m´etier de jeune chercheuse avec beaucoup de patience et de professionnalisme. Elle m’a soutenue, elle a ´et´ed’une disponibilit´eet d’une ´ecoute extraordinaires, tout en sachant ˆetre rigoureuse et exigeante avec moi comme avec elle-mˆeme. Humainement, j’ai beaucoup appr´eci´e la relation d’amiti´eque nous avons entretenue, le climat de confiance que nous avons maintenu et les discussions extra-math´ematiques que nous avons pu avoir et qui ont renforc´ele lien que nous avions. -
A FETI-DP Method for the Parallel Iterative Solution of Indefinite And
INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN ENGINEERING Int. J. Numer. Meth. Engng (in press) Published online in Wiley InterScience (www.interscience.wiley.com). DOI: 10.1002/nme.1282 A FETI-DP method for the parallel iterative solution of indefinite and complex-valued solid and shell vibration problems Charbel Farhat1,∗,†, Jing Li2 and Philip Avery1 1Department of Mechanical Engineering and Institute for Computational and Mathematical Engineering, Stanford University, Building 500, Stanford, CA 94305-3035, U.S.A. 2Department of Mathematical Sciences, Kent State University, Kent, OH 44242, U.S.A. SUMMARY The dual-primal finite element tearing and interconnecting (FETI-DP) domain decomposition method (DDM) is extended to address the iterative solution of a class of indefinite problems of the form K − 2M u = f, and a class of complex problems of the form K − 2M + iD u = f, where K, M, and D are three real symmetric matrices arising from the finite element discretization of solid and shell dynamic problems, i is the imaginary complex number, and is a real positive number. A key component of this extension is a new coarse problem based on the free-space solutions of Navier’s equations of motion. These solutions are waves, and therefore the resulting DDM is reminiscent of the FETI-H method. For this reason, it is named here the FETI-DPH method. For a practically large range, FETI-DPH is shown numerically to be scalable with respect to all of the problem size, substructure size, and number of substructures. The CPU performance of this iterative solver is illustrated on a 40-processor computing system with the parallel solution, for various ranges, of several large-scale, indefinite, or complex-valued systems of equations associated with shifted eigenvalue and forced frequency response structural dynamics problems. -
An Extension of the FETI Domain Decomposition Method for Incompressible and Nearly Incompressible Problems Benoit Vereecke, Henri Bavestrello, David Dureisseix
An extension of the FETI domain decomposition method for incompressible and nearly incompressible problems Benoit Vereecke, Henri Bavestrello, David Dureisseix To cite this version: Benoit Vereecke, Henri Bavestrello, David Dureisseix. An extension of the FETI domain decomposi- tion method for incompressible and nearly incompressible problems. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2003, 192 (31-32), pp.3409-3429. 10.1016/S0045-7825(03)00313- X. hal-00141163 HAL Id: hal-00141163 https://hal.archives-ouvertes.fr/hal-00141163 Submitted on 12 Apr 2007 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. An extension of the FETI domain decomposition method for incompressible and nearly incompressible problems B. Vereecke,∗ H. Bavestrello,† D. Dureisseix‡ Abstract Incompressible and nearly incompressible problems are treated herein with a mixed finite element formulation in order to avoid ill-conditioning that prevents accuracy in pressure estimation and lack of convergence for iterative solution algorithms. A multilevel dual domain decomposition method is then chosen as an iterative algorithm: the original FETI and FETI-DP methods are extended to deal with such problems, when the dis- cretization of the pressure field is discontinuous throughout the elements. -
Preconditioning the Coarse Problem of BDDC Methods—Three-Level, Algebraic Multigrid, and Vertex-Based Preconditioners
Electronic Transactions on Numerical Analysis. Volume 51, pp. 432–450, 2019. ETNA Kent State University and Copyright c 2019, Kent State University. Johann Radon Institute (RICAM) ISSN 1068–9613. DOI: 10.1553/etna_vol51s432 PRECONDITIONING THE COARSE PROBLEM OF BDDC METHODS— THREE-LEVEL, ALGEBRAIC MULTIGRID, AND VERTEX-BASED PRECONDITIONERS∗ AXEL KLAWONNyz, MARTIN LANSERyz, OLIVER RHEINBACHx, AND JANINE WEBERy Abstract. A comparison of three Balancing Domain Decomposition by Constraints (BDDC) methods with an approximate coarse space solver using the same software building blocks is attempted for the first time. The comparison is made for a BDDC method with an algebraic multigrid preconditioner for the coarse problem, a three-level BDDC method, and a BDDC method with a vertex-based coarse preconditioner. It is new that all methods are presented and discussed in a common framework. Condition number bounds are provided for all approaches. All methods are implemented in a common highly parallel scalable BDDC software package based on PETSc to allow for a simple and meaningful comparison. Numerical results showing the parallel scalability are presented for the equations of linear elasticity. For the first time, this includes parallel scalability tests for a vertex-based approximate BDDC method. Key words. approximate BDDC, three-level BDDC, multilevel BDDC, vertex-based BDDC AMS subject classifications. 68W10, 65N22, 65N55, 65F08, 65F10, 65Y05 1. Introduction. During the last decade, approximate variants of the BDDC (Balanc- ing Domain Decomposition by Constraints) and FETI-DP (Finite Element Tearing and Interconnecting-Dual-Primal) methods have become popular for the solution of various linear and nonlinear partial differential equations [1,8,9, 12, 14, 15, 17, 19, 21, 24, 25]. -
FETI-DP Domain Decomposition Method
ECOLE´ POLYTECHNIQUE FED´ ERALE´ DE LAUSANNE Master Project FETI-DP Domain Decomposition Method Supervisors: Author: Davide Forti Christoph Jaggli¨ Dr. Simone Deparis Prof. Alfio Quarteroni A thesis submitted in fulfilment of the requirements for the degree of Master in Mathematical Engineering in the Chair of Modelling and Scientific Computing Mathematics Section June 2014 Declaration of Authorship I, Christoph Jaggli¨ , declare that this thesis titled, 'FETI-DP Domain Decomposition Method' and the work presented in it are my own. I confirm that: This work was done wholly or mainly while in candidature for a research degree at this University. Where any part of this thesis has previously been submitted for a degree or any other qualification at this University or any other institution, this has been clearly stated. Where I have consulted the published work of others, this is always clearly at- tributed. Where I have quoted from the work of others, the source is always given. With the exception of such quotations, this thesis is entirely my own work. I have acknowledged all main sources of help. Where the thesis is based on work done by myself jointly with others, I have made clear exactly what was done by others and what I have contributed myself. Signed: Date: ii ECOLE´ POLYTECHNIQUE FED´ ERALE´ DE LAUSANNE Abstract School of Basic Science Mathematics Section Master in Mathematical Engineering FETI-DP Domain Decomposition Method by Christoph Jaggli¨ FETI-DP is a dual iterative, nonoverlapping domain decomposition method. By a Schur complement procedure, the solution of a boundary value problem is reduced to solving a symmetric and positive definite dual problem in which the variables are directly related to the continuity of the solution across the interface between the subdomains. -
Feti-Dp Method for Dg Discretization of Elliptic Problems with Discontinuous Coefficients
FETI-DP METHOD FOR DG DISCRETIZATION OF ELLIPTIC PROBLEMS WITH DISCONTINUOUS COEFFICIENTS MAKSYMILIAN DRYJA∗ AND MARCUS SARKIS∗† Abstract. In this paper a discontinuous Galerkin (DG) discretization of an elliptic two- dimensional problem with discontinuous coefficients is considered. The problem is posed on a polyg- onal region Ω which is a union of disjoint polygonals Ωi of diameter O(Hi) and forms a geometrically conforming partition of Ω. The discontinuities of the coefficients are assumed to occur only across ∂Ωi. Inside of each substructure Ωi, a conforming finite element space on a quasiuniform triangula- tion with triangular elements and mesh size O(hi) is introduced. To handle the nonmatching meshes across ∂Ωi, a discontinuous Galerkin discretization is considered. For solving the resulting discrete problem, a FETI-DP method is designed and analyzed. It is established that the condition number 2 of the method is estimated by C(1 + maxi log Hi/hi) with a constant C independent of hi, Hi and the jumps of the coefficients. The method is well suited for parallel computations and it can be straightforwardly extended to three-dimensional problems. Key words. Interior penalty discretization, discontinuous Galerkin, elliptic problems with discontinuous coefficients. finite element method, FETI-DP algorithms, preconditioners AMS subject classifications. 65F10, 65N20, 65N30 1. Introduction. In this paper a discontinuous Galerkin (DG) approximation of an elliptic problem with discontinuous coefficients is considered. The problem is posed on a polygonal region Ω which is a union of disjoint polygonal subregions Ωi of diameter O(Hi) and forms a geometrically partition of Ω, i.e., for i 6= j, ∂Ωi ∩ ∂Ωj is empty or is a common corner or edge of ∂Ωi and ∂Ωj, where an edge means a curve of continuous intervals. -
Domain Decomposition Methods for Problems in H(Curl)
Domain Decomposition Methods for Problems in H (curl) by Juan Gabriel Calvo A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Mathematics New York University September 2015 Professor Olof B. Widlund ©Juan Gabriel Calvo All rights reserved, 2015 Dedication To my family. iv Acknowledgements First, my deepest gratitude goes to my advisor Olof Widlund. I thank him profoundly for his direction, guidance, support and advice during four years. I would also like to thank the rest of my committee: Professors Berger, Good- man, O'Neil and Stadler. In addition, I also thank Dr. Clark Dohrmann of the SANDIA-Albuquerque laboratories for his help and comments throughout my re- search. Finally I thank my Alma Mater, Universidad de Costa Rica, for the support during my academic education at NYU. v Abstract Two domain decomposition methods for solving vector field problems posed in H(curl) and discretized with N´ed´elecfinite elements are considered. These finite elements are conforming in H(curl). A two-level overlapping Schwarz algorithm in two dimensions is analyzed, where the subdomains are only assumed to be uniform in the sense of Peter Jones. The coarse space is based on energy minimization and its dimension equals the number of interior subdomain edges. Local direct solvers are based on the overlapping subdomains. The bound for the condition number depends only on a few geometric parameters of the decomposition. This bound is independent of jumps in the coefficients across the interface between the subdomains for most of the different cases considered. -
Multigrid Solvers for Immersed Finite Element Methods and Immersed Isogeometric Analysis
Computational Mechanics https://doi.org/10.1007/s00466-019-01796-y ORIGINAL PAPER Multigrid solvers for immersed finite element methods and immersed isogeometric analysis F. de Prenter1,3 · C. V. Verhoosel1 · E. H. van Brummelen1 · J. A. Evans2 · C. Messe2,4 · J. Benzaken2,5 · K. Maute2 Received: 26 March 2019 / Accepted: 10 November 2019 © The Author(s) 2019 Abstract Ill-conditioning of the system matrix is a well-known complication in immersed finite element methods and trimmed isogeo- metric analysis. Elements with small intersections with the physical domain yield problematic eigenvalues in the system matrix, which generally degrades efficiency and robustness of iterative solvers. In this contribution we investigate the spectral prop- erties of immersed finite element systems treated by Schwarz-type methods, to establish the suitability of these as smoothers in a multigrid method. Based on this investigation we develop a geometric multigrid preconditioner for immersed finite element methods, which provides mesh-independent and cut-element-independent convergence rates. This preconditioning technique is applicable to higher-order discretizations, and enables solving large-scale immersed systems at a computational cost that scales linearly with the number of degrees of freedom. The performance of the preconditioner is demonstrated for conventional Lagrange basis functions and for isogeometric discretizations with both uniform B-splines and locally refined approximations based on truncated hierarchical B-splines. Keywords Immersed finite element method · Fictitious domain method · Iterative solver · Preconditioner · Multigrid 1 Introduction [14–21], scan based analysis [22–27] and topology optimiza- tion, e.g., [28–34]. Immersed methods are useful tools to avoid laborious and An essential aspect of finite element methods and iso- computationally expensive procedures for the generation of geometric analysis is the computation of the solution to a body-fitted finite element discretizations or analysis-suitable system of equations. -
Using Algebraic Multigrid in Inexact BDDC Domain Decomposition Methods
Using Algebraic Multigrid in Inexact BDDC Domain Decomposition Methods Axel Klawonn, Martin Lanser, and Oliver Rheinbach 1 Introduction Traditionally, domain decomposition methods use sparse direct solvers as building blocks, i.e., to solve local subdomain problems and/or the coarse problem. Often, the sparse direct solvers can be replaced by spectrally equivalent preconditioners without loss of convergence speed. In FETI-DP and BDDC domain decomposition methods, such approaches have first been introduced in [9, 8, 4], and have since then successfully been used in large parallel codes [6, 1]. 2 An Inexact BDDC Method 2.1 A BDDC Preconditioner for the Assembled System Let us briefly describe the BDDC preconditioner which can directly be applied to a linear system Au = b (1) arising from a finite element discretization of a partial differential equation on a d computational domain W ⊂ R ; d = 2;3. The variant discussed here was first intro- duced in [9]. Let Wi; i = 1;:::;N; be a nonoverlapping domain decomposition of SN W such that W = i=1 W i. Each subdomain Wi is discretized using finite elements, Axel Klawonn, Martin Lanser Mathematisches Institut, Universitat¨ zu Koln,¨ Weyertal 86-90, 50931 Koln,¨ Germany, e-mail: faxel.klawonn,[email protected] Oliver Rheinbach Institut fur¨ Numerische Mathematik und Optimierung, Fakultat¨ fur¨ Mathematik und Infor- matik, Technische Universitat¨ Bergakademie Freiberg, Akademiestr. 6, 09596 Freiberg, e-mail: [email protected] 1 2 Axel Klawonn, Martin Lanser, and Oliver Rheinbach the corresponding local finite element spaces are denoted by Wi; i = 1;:::;N, and the product space is defined by W = W1 ×:::×WN.