Selegiline Binding to Monoamine Oxidase Enzyme
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Novel Neuroprotective Compunds for Use in Parkinson's Disease
Novel neuroprotective compounds for use in Parkinson’s disease A thesis submitted to Kent State University in partial Fulfillment of the requirements for the Degree of Master of Science By Ahmed Shubbar December, 2013 Thesis written by Ahmed Shubbar B.S., University of Kufa, 2009 M.S., Kent State University, 2013 Approved by ______________________Werner Geldenhuys ____, Chair, Master’s Thesis Committee __________________________,Altaf Darvesh Member, Master’s Thesis Committee __________________________,Richard Carroll Member, Master’s Thesis Committee ___Eric_______________________ Mintz , Director, School of Biomedical Sciences ___Janis_______________________ Crowther , Dean, College of Arts and Sciences ii Table of Contents List of figures…………………………………………………………………………………..v List of tables……………………………………………………………………………………vi Acknowledgments.…………………………………………………………………………….vii Chapter 1: Introduction ..................................................................................... 1 1.1 Parkinson’s disease .............................................................................................. 1 1.2 Monoamine Oxidases ........................................................................................... 3 1.3 Monoamine Oxidase-B structure ........................................................................... 8 1.4 Structural differences between MAO-B and MAO-A .............................................13 1.5 Mechanism of oxidative deamination catalyzed by Monoamine Oxidases ............15 1 .6 Neuroprotective effects -
Monoamine Oxidase Inhibitors: Promising Therapeutic Agents for Alzheimer's Disease (Review)
MOLECULAR MEDICINE REPORTS 9: 1533-1541, 2014 Monoamine oxidase inhibitors: Promising therapeutic agents for Alzheimer's disease (Review) ZHIYOU CAI Department of Neurology, The Lu'an Affiliated Hospital of Anhui Medical University, Lu'an People's Hospital, Lu'an, Anhui 237005, P.R. China Received July 2, 2013; Accepted February 10, 2014 DOI: 10.3892/mmr.2014.2040 Abstract. Activated monoamine oxidase (MAO) has a critical 6. MAO activation contributes to cognitive impairment in role in the pathogenesis of Alzheimer's disease (AD), including patients with AD the formation of amyloid plaques from amyloid β peptide (Aβ) 7. Activated MAO contributes to the formation of amyloid production and accumulation, formation of neurofibrillary plaques tangles, and cognitive impairment via the destruction of cholin- 8. Is activated MAO associated with the formation of ergic neurons and disorder of the cholinergic system. Several neurofibrillary tangles? studies have indicated that MAO inhibitors improve cognitive 9. Evidence for the neuroprotective effect of MAO inhibitors deficits and reverse Aβ pathology by modulating proteolytic in AD cleavage of amyloid precursor protein and decreasing Aβ 10. Conclusions and outlook protein fragments. Thus, MAO inhibitors may be considered as promising therapeutic agents for AD. 1. Introduction Monoamine oxidase (MAO) catalyzes the oxidative deamina- Contents tion of biogenic and xenobiotic amines and has an important role in the metabolism of neuroactive and vasoactive amines in 1. Introduction the central nervous system (CNS) and peripheral tissues. The 2. Monoamine oxidase (MAO) enzyme preferentially degrades benzylamine and phenylethyl- 3. Involvement of MAO in neurodegeneration amine and targets a wide variety of specific neurotransmitters 4. -
Pharmaceutical Appendix to the Tariff Schedule 2
Harmonized Tariff Schedule of the United States (2007) (Rev. 2) Annotated for Statistical Reporting Purposes PHARMACEUTICAL APPENDIX TO THE HARMONIZED TARIFF SCHEDULE Harmonized Tariff Schedule of the United States (2007) (Rev. 2) Annotated for Statistical Reporting Purposes PHARMACEUTICAL APPENDIX TO THE TARIFF SCHEDULE 2 Table 1. This table enumerates products described by International Non-proprietary Names (INN) which shall be entered free of duty under general note 13 to the tariff schedule. The Chemical Abstracts Service (CAS) registry numbers also set forth in this table are included to assist in the identification of the products concerned. For purposes of the tariff schedule, any references to a product enumerated in this table includes such product by whatever name known. ABACAVIR 136470-78-5 ACIDUM LIDADRONICUM 63132-38-7 ABAFUNGIN 129639-79-8 ACIDUM SALCAPROZICUM 183990-46-7 ABAMECTIN 65195-55-3 ACIDUM SALCLOBUZICUM 387825-03-8 ABANOQUIL 90402-40-7 ACIFRAN 72420-38-3 ABAPERIDONUM 183849-43-6 ACIPIMOX 51037-30-0 ABARELIX 183552-38-7 ACITAZANOLAST 114607-46-4 ABATACEPTUM 332348-12-6 ACITEMATE 101197-99-3 ABCIXIMAB 143653-53-6 ACITRETIN 55079-83-9 ABECARNIL 111841-85-1 ACIVICIN 42228-92-2 ABETIMUSUM 167362-48-3 ACLANTATE 39633-62-0 ABIRATERONE 154229-19-3 ACLARUBICIN 57576-44-0 ABITESARTAN 137882-98-5 ACLATONIUM NAPADISILATE 55077-30-0 ABLUKAST 96566-25-5 ACODAZOLE 79152-85-5 ABRINEURINUM 178535-93-8 ACOLBIFENUM 182167-02-8 ABUNIDAZOLE 91017-58-2 ACONIAZIDE 13410-86-1 ACADESINE 2627-69-2 ACOTIAMIDUM 185106-16-5 ACAMPROSATE 77337-76-9 -
Amino Acid Catabolism: Urea Cycle the Urea Bi-Cycle Two Issues
BI/CH 422/622 OUTLINE: OUTLINE: Protein Degradation (Catabolism) Digestion Amino-Acid Degradation Inside of cells Urea Cycle – dealing with the nitrogen Protein turnover Ubiquitin Feeding the Urea Cycle Activation-E1 Glucose-Alanine Cycle Conjugation-E2 Free Ammonia Ligation-E3 Proteosome Glutamine Amino-Acid Degradation Glutamate dehydrogenase Ammonia Overall energetics free Dealing with the carbon transamination-mechanism to know Seven Families Urea Cycle – dealing with the nitrogen 1. ADENQ 5 Steps 2. RPH Carbamoyl-phosphate synthetase oxidase Ornithine transcarbamylase one-carbon metabolism Arginino-succinate synthetase THF Arginino-succinase SAM Arginase 3. GSC Energetics PLP uses Urea Bi-cycle 4. MT – one carbon metabolism 5. FY – oxidases Amino Acid Catabolism: Urea Cycle The Urea Bi-Cycle Two issues: 1) What to do with the fumarate? 2) What are the sources of the free ammonia? a-ketoglutarate a-amino acid Aspartate transaminase transaminase a-keto acid Glutamate 1 Amino Acid Catabolism: Urea Cycle The Glucose-Alanine Cycle • Vigorously working muscles operate nearly anaerobically and rely on glycolysis for energy. a-Keto acids • Glycolysis yields pyruvate. – If not eliminated (converted to acetyl- CoA), lactic acid will build up. • If amino acids have become a fuel source, this lactate is converted back to pyruvate, then converted to alanine for transport into the liver. Excess Glutamate is Metabolized in the Mitochondria of Hepatocytes Amino Acid Catabolism: Urea Cycle Excess glutamine is processed in the intestines, kidneys, and liver. (deaminating) (N,Q,H,S,T,G,M,W) OAA à Asp Glutamine Synthetase This costs another ATP, bringing it closer to 5 (N,Q,H,S,T,G,M,W) 29 N 2 Amino Acid Catabolism: Urea Cycle Excess glutamine is processed in the intestines, kidneys, and liver. -
Amino&Acid&Metabolism& (Chapter&21)&
BIOCH 765: Biochemistry II Spring 2014 Amino&Acid&Metabolism& (Chapter&21)& Jianhan&Chen& Office&Hour:&MF&1:30A2:30PM,&Chalmers&034& Email:&[email protected]& Office:&785A2518& Overview& • IntroducPon&to&amino&acids&and&proteins&(1)& • Protein°radaPon&(1)& • Amino&acid&deaminaPon&(1)& • The&urea&cycle&(1)& • Breakdown&of&amino&acids&(2)& • Amino&acid&synthesis&(1)& • Nitrogen&fiXaPon&(1)& • Key&reference:&Chapter&21&& &&&&&of&Voet,&Voet&&&Pra\&(and& &&&&&this&lecture¬e/google)& (c)&Jianhan&Chen& 2& Overview&of&Metabolism& • Metabolism is the sum/total of all the biochemical reactions that take place in a living organism. • Catabolism is all metabolic reactions in which large biochemical molecules are broken down to smaller ones, thus generating energy. • Anabolism is all metabolic reactions in which small biochemical molecules are joined to form larger ones through consumption of energy. catabolism + energy anabolism 3 Major&Stages&of&Catabolism& 4 Insert: macromolecule anabolism Plants start with Biosynthetic pathways always differ from catabolic pathways. 5 Summary of Protein/Amino Acid Body Proteins (protein turnover) Metabolism Amino alcohols Hormones Heme Dietary Proteins Amino Acids Purines (digestion) Pyrimidines degradation Neurotransmitters Nucleotides Glucose + Pyruvate Carbon skeletons NH4 Urea Acetyl Citric Acid cholesterol ATP CoA cycle Fatty acids Ketone bodies 6 Chapter&21&A&1& 1.#PROTEIN#DEGRADATION# Key#Concepts#21.1## •&EXtracellular&and&intracellular&proteins&may&be&digested&by&lysosomal&proteases.& •&Other&proteins&to&be°raded&are&first&conjugated&to&the&protein&ubiquiPn.& -
Identification of Novel Monoamine Oxidase B Inhibitors from Ligand Based Virtual Screening
Identification of novel monoamine oxidase B inhibitors from ligand based virtual screening A thesis submitted to Kent State University in partial Fulfillment of the requirements for the Degree of Master of Science By Mohammed Alaasam August, 2014 Thesis written by Mohammed Alaasam B.S., University of Baghdad, 2007 M.S., Kent State University, 2014 Approved by Werner Geldenhuys , Chair, Master’s Thesis Committee Richard Carroll , Member, Master’s Thesis Committee Prabodh Sadana , Member, Master’s Thesis Committee Eric Mintz , Director, School of Biomedical Sciences James Blank , Dean, College of Arts and Sciences ii Table of Contents List of figure ...................................................................................................................... vi List of tables ..................................................................................................................... xiii Acknowledgments............................................................................................................ xiv Chapter one: Introduction ............................................................................................... 1 1.1.Parkinson's disease ....................................................................................................... 1 1.2.Monoamine oxidase enzymes ....................................................................................... 7 1.3.Structures of MAO enzymes ....................................................................................... 12 1.4.Three dimentiona -
Monoamine Oxidase and Semicarbazide-Sensitive Amine Oxidase Kinetic Analysis in Mesenteric Arteries of Patients with Type 2 Diabetes
Physiol. Res. 60: 309-315, 2011 https://doi.org/10.33549/physiolres.931982 Monoamine Oxidase and Semicarbazide-Sensitive Amine Oxidase Kinetic Analysis in Mesenteric Arteries of Patients With Type 2 Diabetes S. F. NUNES1, I. V. FIGUEIREDO1, 3, J. S. PEREIRA2, E. T. DE LEMOS3, F. REIS3, F. TEIXEIRA3, M. M. CARAMONA1 1Laboratory of Pharmacology, Faculty of Pharmacy, Coimbra University, Coimbra, Portugal, 2Portuguese Oncology Institute of Coimbra, Portugal, 3Institute of Pharmacology and Experimental Therapeutics, IBILI, Faculty of Medicine, Coimbra University, Coimbra, Portugal Received February 22, 2010 Accepted August 30, 2010 On-line November 29, 2010 Summary Corresponding author Monoamine oxidase (MAO, type A and B) and semicarbazide- M. M. Caramona, Laboratory of Pharmacology, Faculty of sensitive amine oxidase (SSAO) metabolize biogenic amines, Pharmacy, Coimbra University, 3000-548, Coimbra, Portugal. however, the impact of these enzymes in arteries from patients Fax: +351 239 488 503. E-mail: [email protected] with type 2 diabetes remains poorly understood. We investigated the kinetic parameters of the enzymes to establish putative correlations with noradrenaline (NA) content and patient age in Introduction human mesenteric arteries from type 2 diabetic patients. The kinetic parameters were evaluated by radiochemical assay and Oxidative stress can be defined as a disturbance NA content by high-performance liquid chromatography (HPLC). in the balance between the production of free radicals – The activity of MAO-A and SSAO in type 2 diabetic vascular such as superoxide anion, hydroxyl radicals and hydrogen tissues was significantly lower compared to the activity obtained peroxide – and antioxidant mechanisms (Ramakrishna in non-diabetic tissues. In the correlation between and Jailkhani 2008). -
Lower Monoamine Oxidase-A Total Distribution Volume in Impulsive
Neuropsychopharmacology (2015) 40, 2596–2603 © 2015 American College of Neuropsychopharmacology. All rights reserved 0893-133X/15 www.neuropsychopharmacology.org Lower Monoamine Oxidase-A Total Distribution Volume in Impulsive and Violent Male Offenders with Antisocial Personality Disorder and High Psychopathic Traits: An [11C] Harmine Positron Emission Tomography Study 1,2,3,4 1,2 1,2,3 1,2,3 1,2,3,5 Nathan J Kolla , Brittany Matthews , Alan A Wilson , Sylvain Houle , R Michael Bagby , 4,6 3 1,2 *,1,2,3,4 Paul Links , Alexander I Simpson , Amina Hussain and Jeffrey H Meyer 1Centre for Addiction and Mental Health (CAMH) Research Imaging Centre, Toronto, Ontario, Canada; 2Campbell Family Mental Health Research 3 4 Institute, CAMH, Toronto, Ontario, Canada; Department of Psychiatry, University of Toronto, Toronto, Ontario, Canada; Institute of Medical 5 6 Science, University of Toronto, Toronto, Ontario, Canada; Department of Psychology, University of Toronto, Toronto, Ontario, Canada; Department of Psychiatry, University of Western Ontario, Toronto, Ontario, Canada Antisocial personality disorder (ASPD) often presents with highly impulsive, violent behavior, and pathological changes in the orbitofrontal cortex (OFC) and ventral striatum (VS) are implicated. Several compelling reasons support a relationship between low monoamine oxidase-A (MAO-A), an enzyme that regulates neurotransmitters, and ASPD. These include MAO-A knockout models in rodents evidencing impulsive aggression and positron emission tomography (PET) studies of healthy subjects reporting associations between low brain MAO-A levels and greater impulsivity or aggression. However, a fundamental gap in the literature is that it is unknown whether brain 11 MAO-A levels are low in more severe, clinical disorders of impulsivity, such as ASPD. -
Federal Register / Vol. 60, No. 80 / Wednesday, April 26, 1995 / Notices DIX to the HTSUS—Continued
20558 Federal Register / Vol. 60, No. 80 / Wednesday, April 26, 1995 / Notices DEPARMENT OF THE TREASURY Services, U.S. Customs Service, 1301 TABLE 1.ÐPHARMACEUTICAL APPEN- Constitution Avenue NW, Washington, DIX TO THE HTSUSÐContinued Customs Service D.C. 20229 at (202) 927±1060. CAS No. Pharmaceutical [T.D. 95±33] Dated: April 14, 1995. 52±78±8 ..................... NORETHANDROLONE. A. W. Tennant, 52±86±8 ..................... HALOPERIDOL. Pharmaceutical Tables 1 and 3 of the Director, Office of Laboratories and Scientific 52±88±0 ..................... ATROPINE METHONITRATE. HTSUS 52±90±4 ..................... CYSTEINE. Services. 53±03±2 ..................... PREDNISONE. 53±06±5 ..................... CORTISONE. AGENCY: Customs Service, Department TABLE 1.ÐPHARMACEUTICAL 53±10±1 ..................... HYDROXYDIONE SODIUM SUCCI- of the Treasury. NATE. APPENDIX TO THE HTSUS 53±16±7 ..................... ESTRONE. ACTION: Listing of the products found in 53±18±9 ..................... BIETASERPINE. Table 1 and Table 3 of the CAS No. Pharmaceutical 53±19±0 ..................... MITOTANE. 53±31±6 ..................... MEDIBAZINE. Pharmaceutical Appendix to the N/A ............................. ACTAGARDIN. 53±33±8 ..................... PARAMETHASONE. Harmonized Tariff Schedule of the N/A ............................. ARDACIN. 53±34±9 ..................... FLUPREDNISOLONE. N/A ............................. BICIROMAB. 53±39±4 ..................... OXANDROLONE. United States of America in Chemical N/A ............................. CELUCLORAL. 53±43±0 -
Amino Acid Metabolism. General Pathways of Transformation of Amino Acids
Ministry of Public Health of Ukraine Ukrainian Medical Stomatological Academy Department of biological and bioorganic chemistry Amino acid metabolism. General pathways of transformation of amino acids. Ammonia metabolism: biosynthesis of urea and its disorders. Assoc. Prof. Bilets M.V. Lecture plan • The general pathways of amino acids metabolism: - Decarboxylation of amino acids. - Transamination of amino acids - Direct and indirect deamination of amino acids. • Pathways of ammonia formation. • The molecular mechanisms of ammonia toxicity. • The molecular mechanisms of ammonia detoxification. Amino acid, any of a group of organic molecules that consist of a basic amino group (―NH2), an acidic carboxyl group (―COOH), and an organic R group (or side chain) that is unique to each amino acid. The term amino acid is short for α-amino [alpha-amino] carboxylic acid. Each molecule contains a central carbon (C) atom, called the α- carbon, to which both an amino and a carboxyl group are attached. The remaining two bonds of the α-carbon atom are generally satisfied by a hydrogen (H) atom and the R group. The formula of a general amino acid is: 1.The amino acids are used by various tissues to synthesize proteins and to produce nitrogen-containing compounds (e.g., purines, heme, creatine, epinephrine), or they are oxidized to produce energy. 2.The breakdown of both dietary and tissue proteins yields nitrogen-containing substrates and carbon skeletons. 3.The nitrogen-containing substrates are used in the biosynthesis of purines, pyrimidines, neurotransmitters, hormones, porphyrins, and nonessential amino acids. 4.The carbon skeletons are used as a fuel source in the citric acid cycle, used for gluconeogenesis, or used in fatty acid synthesis. -
Amino Acid Catabolism
Amino Acid Catabolism • Dietary Proteins • Turnover of Protein • Cellular protein • Deamination • Urea cycle • Carbon skeletons of amino acids Amino Acid Metabolism •Metabolism of the 20 common amino acids is considered from the origins and fates of their: (1) Nitrogen atoms (2) Carbon skeletons •For mammals: Essential amino acids must be obtained from diet Nonessential amino acids - can be synthesized Amino Acid Catabolism • Amino acids from degraded proteins or from diet can be used for the biosynthesis of new proteins • During starvation proteins are degraded to amino acids to support glucose formation • First step is often removal of the α-amino group • Carbon chains are altered for entry into central pathways of carbon metabolism Dietary Proteins • Digested in intestine • by peptidases • transport of amino acids • active transport coupled with Na+ Protein Turnover • Proteins are continuously synthesized and degraded (turnover) (half-lives minutes to weeks) • Lysosomal hydrolysis degrades some proteins • Some proteins are targeted for degradation by a covalent attachment (through lysine residues) of ubiquitin (C terminus) • Proteasome hydrolyzes ubiquitinated proteins Turnover of Protein • Cellular protein • Proteasome degrades protein with Ub tags • T 1/2 determined by amino terminus residue • stable: ala, pro, gly, met greater than 20h • unstable: arg, lys, his, phe 2-30 min Ubibiquitin • Ubiquitin protein, 8.5 kD • highly conserved in yeast/humans • carboxy terminal attaches to ε-lysine amino group • Chains of 4 or more Ub molecules -
Flavoprotein Monooxygenases: Versatile Biocatalysts
Biotechnology Advances xxx (xxxx) xxx Contents lists available at ScienceDirect Biotechnology Advances journal homepage: www.elsevier.com/locate/biotechadv Research review paper Flavoprotein monooxygenases: Versatile biocatalysts Caroline E. Paul a, Daniel Eggerichs b, Adrie H. Westphal c, Dirk Tischler b, Willem J. H. van Berkel d,* a Biocatalysis, Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands b Microbial Biotechnology, Faculty of Biology and Biotechnology, Ruhr-Universitat¨ Bochum, Universitatsstrasse¨ 150, 44780 Bochum, Germany c Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE Wageningen, The Netherlands d Laboratory of Food Chemistry, Wageningen University, Bornse Weilanden 9, 6708 WG Wageningen, The Netherlands ARTICLE INFO ABSTRACT Keywords: Flavoprotein monooxygenases (FPMOs) are single- or two-component enzymes that catalyze a diverse set of Baeyer-Villiger oxidation chemo-, regio- and enantioselective oxyfunctionalization reactions. In this review, we describe how FPMOs have biocatalysis evolved from model enzymes in mechanistic flavoprotein research to biotechnologically relevant catalysts that dearomatization can be applied for the sustainable production of valuable chemicals. After a historical account of the develop epoxidation ment of the FPMO field, we explain the FPMO classification system, which is primarily based on protein flavin halogenation structural properties and electron donor specificities.We then summarize the most appealing reactions catalyzed hydroxylation by each group with a focus on the different types of oxygenation chemistries. Wherever relevant, we report oxygenation engineering strategies that have been used to improve the robustness and applicability of FPMOs. (hydro)peroxide microbial degradation 1. Introduction the reduced flavin in most flavoenzymes has a lower pKa than that of free reduced FMN (pKa = 6.7) (Müller, 2014).