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RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY Proceedings of the 5th WSEAS International Conference on CELLULAR and MOLECULAR BIOLOGY, BIOPHYSICS and BIOENGINEERING (BIO '09) Proceedings of the 3rd WSEAS International Conference on COMPUTATIONAL CHEMISTRY (COMPUCHEM '09) Puerto De La Cruz, Tenerife, Canary Islands, Spain December 14-16, 2009 Recent Advances in Biology and Biomedicine A Series of Reference Books and Textbooks Published by WSEAS Press ISSN: 1790-5125 www.wseas.org ISBN: 978-960-474-141-0 RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY Proceedings of the 5th WSEAS International Conference on CELLULAR and MOLECULAR BIOLOGY, BIOPHYSICS and BIOENGINEERING (BIO '09) Proceedings of the 3rd WSEAS International Conference on COMPUTATIONAL CHEMISTRY (COMPUCHEM '09) Puerto De La Cruz, Tenerife, Canary Islands, Spain December 14-16, 2009 Recent Advances in Biology and Biomedicine A Series of Reference Books and Textbooks Published by WSEAS Press www.wseas.org Copyright © 2009, by WSEAS Press All the copyright of the present book belongs to the World Scientific and Engineering Academy and Society Press. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, without the prior written permission of the Editor of World Scientific and Engineering Academy and Society Press. All papers of the present volume were peer reviewed by two independent reviewers. Acceptance was granted when both reviewers' recommendations were positive. See also: http://www.worldses.org/review/index.html ISSN: 1790-5125 ISBN: 978-960-474-141-0 World Scientific and Engineering Academy and Society RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY Proceedings of the 5th WSEAS International Conference on CELLULAR and MOLECULAR BIOLOGY, BIOPHYSICS and BIOENGINEERING (BIO '09) Proceedings of the 3rd WSEAS International Conference on COMPUTATIONAL CHEMISTRY (COMPUCHEM '09) Puerto De La Cruz, Tenerife, Canary Islands, Spain December 14-16, 2009 Editors: Prof. Cornelia A. Bulucea, University of Craiova, Romania Prof. Valeri Mladenov, Technical University of Sofia, Bulgaria Prof. Emil Pop, University of Petrosani, Romania Prof. Monica Leba, University of Petrosani, Romania Prof. Nikos Mastorakis, Technical University of Sofia, Bulgaria International Program Committee Members: Jill Mesirov (MIT) Walter Thiel (Max Planck Institute) Thomas Lengauer (Saarbrucken) Wilfred van Gunsteren (ETH) Alfonso Valencia (CNB, Madrid) Alexander Lyubartsev (Stockholm University) Ceslovas Venclovas (Vilnius) Alexey Mazur (CNRS-UPR9080, IBPC) Martin Vingron (Max Planck Institute, Berlin) Alexey Onufiev (Virginia Tech) Shoshana Wodak (University of Toronto) Amedeo Palma (CNR-ISMN) Ralf Zimmer (Saarbrucken) Andriy Baumketner (UNC Charlotte) Haim Wolfson (Tel Aviv University) Dieter Hofmann (GKSS Research Centre) Alberto Apostolico (Padova University) George Shields (Hamilton College) Serafim Batzoglou (Stanford University) Hassan Safouhi (University of Alberta) Rita Casadio (Bologna University) Jaroslav Koca (Masaryk university, Fac Sci) Soren Brunak (Technical University Denmark) Jiri Vanicek (EPFL) Frank Eisenhaber (IMP, Vienna) Laurence Leherte (University of Namur) Marie- Nir Friedman (Hebrew University of Jerusalem) Pierre Gaigeot (Universite d'Evry val d'Essonne) Mikhail Gelfand (IITP, Moscow) Martin Parker (University of Leeds) Raffaele Giancarlo (Palermo University) Nick Quirke (Imperial College London) David Gilbert (University of Glasgow) Paul Smith (Kansas State University) Concettina Guerra (Padova University) Robert Woods (Carbohydrate Research Center) Roderic Guigo (IMIM, Barcelona) Roberto Lins (Pacific Northwest Laboratory) Sorin Istrail (Brown University) Roman Efremov (Shemyakin-Ovchinnikov) Simon Kasif (Boston University) Scott Brown (Abbott Laboratories) Andrzej Kolinski (Warsaw University) Shina Lynn Kamerlin (Southern California) Gregory Kucherov (LIFL, Lille) Tanja van Mourik (University of St Andrews) Giuseppe Lancia (Udine University) Yaoqi Zhou (Indiana University) Satoru Miyano (Tokyo University) Yingkai Zhang (New York University) Pavel Pevzner (San Diego) Ron Pinter (Technion, Haifa) Tal Pupko (Tel Aviv University) Aviv Regev (Harvard University) Isidore Rigoutsos (TJ Watson Research Center) Burkhardt Rost (Columbia University) Mikhail Roytberg (IMPB, Russia) Marie-France Sagot (Lyon) Eran Segal (Weizmann Institute of Science) Ron Shamir (Tel Aviv University) Roded Sharan (Tel Aviv University) Steve Skiena (SUNY Stony Brook) Jeff Skolnick (Georgia Institute of Technology) Wojciech Szpankowski (Purdue University) Anna Tramontano (University of Rome) Ron Unger (Bar Ilan University) Donald Truhlar (University of Minnesota) Graham Richards (University of Oxford) Minhaeng Cho (Korea University) Modesto Orozco (University of Barcelona) Pavel Hobza (Czech Republic) Rebecca Wade (EML Research) Richard Friesner (Columbia University) Todd Martinez (University of Illinois) Preface This year the 5th WSEAS International Conference on CELLULAR and MOLECULAR BIOLOGY, BIOPHYSICS and BIOENGINEERING (BIO'09) and the 3rd WSEAS International Conference on COMPUTATIONAL CHEMISTRY (COMPUCHEM'09) were held at Puerto De La Cruz, Tenerife, Canary Islands, Spain, December 14-16, 2009. The conferences remain faithful to their original idea of providing a platform to discuss biology of cell, metabolism, molecular biology, neural modeling, biophysics, biochemistry, computer biology, genetics, theoretical chemistry, computational material science, numerical analysis for chemical engineering and chemistry, computational intelligence tools for chemistry and chemical engineering, computational molecular science and nanoscience, mathematical molecular medicine, chemical fluid mechanics, environmental chemical engineering etc. with participants from all over the world, both from academia and from industry. Their success is reflected in the papers received, with participants coming from several countries, allowing a real multinational multicultural exchange of experiences and ideas. The accepted papers of these conferences are published in this Book that will be indexed by ISI. Please, check it: www.worldses.org/indexes as well as in the CD-ROM Proceedings. They will be also available in the E-Library of the WSEAS. The best papers will be also promoted in many Journals for further evaluation. Conferences such as these can only succeed as a team effort, so the Editors want to thank the International Scientific Committee and the Reviewers for their excellent work in reviewing the papers as well as their invaluable input and advice. The Editors RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY Table of Contents Plenary Lecture 1: Nanoparticles for the Transport of Antiretroviral Drugs across the Blood- 11 Brain Barrier: A Potential Therapy for the Acquired Immunodeficiency Syndrome Yung-Chih Kuo Plenary Lecture 2: Creation of Electromagnetic Structure-Creating Spaces to Improve the 12 Growth of Some Types of Cells and Albumins Vladyslav Vlastopulo Plenary Lecture 3: A New Way of Natural Oligopeptide Primary Structure Elucidation 13 Alexander A. Zamyatnin Studies on a Promising Anticancer Molecule of Marine Origin. Results of an Interdisciplinary 15 Study A. Zovko, T. Turk, M. Faimali, F. Garaventa, E. Chelossi, C. Falugi, M. G. Aluigi, C. Angelini, S. Trombino, L. Gallus, S. Ferrando, P. Russo, L. Paleari, K. Sepcic An Intelligent Controller of the Chemical Reactor 24 Jelenka Savkovic-Stevanovic Evolution of Proliferating Cells under Different Decaying Behaviors of the Total Tumor Cells 30 During a Course of Treatment Mitra Shojania Feizabadi A New Way of Natural Oligopeptide Primary Structure Elucidation 33 Alexander A. Zamyatnin Nitrate Removal from the Cetina Surface Water by using Bacteria Attached to Lewatit M600 39 Lucija Foglar, Ana-Marija Babic, Mario Siljeg Information Theory-Based Code Optimization of Matrix Elements for Overall Rotation 45 Angular Momenta Maria Eugenia Castro, Camelia Munoz-Caro, Alfonso Nino Nanoaggregation and Solubility of Crude Oil Asphaltenes from Molecular Dynamics 51 Simulations Francesco Frigerio Computational Study of Nodifloridin-A and Nodiflorifin-B, with Highlight on the Peculiarities 58 of Acylated Phloroglucinol Derivatives Liliana Mammino, Mwadham M. Kabanda Mitochondrial DNA Copy Number and Citrate Synthase Activity in Nonalcoholic Fatty Liver 64 Disease Induced in Rats by a high-fat plus Fructose Diet Fortified or not with Dehydroepiandrosterone (DHEA) Angela Maria Lezza, Pierluigi Cassano, Raffaella Mastrocola, Pesce Vito, Manuela Aragno, Maria Nicola Gadaleta DFT Study of Tautomeric Equilibria of 6-Hydroxy—Flourocytosine 68 Behzad Chahkandi, Sorour Hasani ISSN: 1790-5125 9 ISBN: 978-960-474-141-0 RECENT ADVANCES in BIOLOGY, BIOPHYSICS, BIOENGINEERING and COMPUTATIONAL CHEMISTRY Investigation of Various Conformations of HCO-Gly-L-Val-Gly-NH2 Tripeptide in Elastin: Ab 74 Initio and DFT Calculations Behzad Chahkandi, Badrosadat Seyed Hosseini Nanochannel and its Application in Analytical Chemistry 80 Zenglian Yue, Guoqing Zhao, Bin Peng, Shasheng Huang On the Numerical Solution of Mathematical Models of Cancer Growth and Optimal Cancer 94 Therapy Nikos E. Mastorakis Development of Transgenic Cotton Expressing Modified Bt and CpTI Genes by Pollen Tube 105 Pathway
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