Easychair Preprint Ant Microbial Endosymbionts and the Emergent
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(Pentatomidae) DISSERTATION Presented
Genome Evolution During Development of Symbiosis in Extracellular Mutualists of Stink Bugs (Pentatomidae) DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Alejandro Otero-Bravo Graduate Program in Evolution, Ecology and Organismal Biology The Ohio State University 2020 Dissertation Committee: Zakee L. Sabree, Advisor Rachelle Adams Norman Johnson Laura Kubatko Copyrighted by Alejandro Otero-Bravo 2020 Abstract Nutritional symbioses between bacteria and insects are prevalent, diverse, and have allowed insects to expand their feeding strategies and niches. It has been well characterized that long-term insect-bacterial mutualisms cause genome reduction resulting in extremely small genomes, some even approaching sizes more similar to organelles than bacteria. While several symbioses have been described, each provides a limited view of a single or few stages of the process of reduction and the minority of these are of extracellular symbionts. This dissertation aims to address the knowledge gap in the genome evolution of extracellular insect symbionts using the stink bug – Pantoea system. Specifically, how do these symbionts genomes evolve and differ from their free- living or intracellular counterparts? In the introduction, we review the literature on extracellular symbionts of stink bugs and explore the characteristics of this system that make it valuable for the study of symbiosis. We find that stink bug symbiont genomes are very valuable for the study of genome evolution due not only to their biphasic lifestyle, but also to the degree of coevolution with their hosts. i In Chapter 1 we investigate one of the traits associated with genome reduction, high mutation rates, for Candidatus ‘Pantoea carbekii’ the symbiont of the economically important pest insect Halyomorpha halys, the brown marmorated stink bug, and evaluate its potential for elucidating host distribution, an analysis which has been successfully used with other intracellular symbionts. -
Effects on Brood Development in the Carpenter Ant Camponotus Vicinus Mayr After Exposure to the Yeast Associate Schwanniomyces Polymorphus Kloecker
insects Article Effects on Brood Development in the Carpenter Ant Camponotus vicinus Mayr after Exposure to the Yeast Associate Schwanniomyces polymorphus Kloecker Mark E. Mankowski 1,*, Jeffrey J. Morrell 2 and Patricia K. Lebow 3 1 Forest Products Laboratory Starkville, USDA Forest Service, Starkville, MS 39759, USA 2 Centre Timber Durability and Design Life, University of the Sunshine Coast, Sippy Downs, QLD 4102, Australia; [email protected] 3 Forest Products Laboratory Madison, USDA Forest Service, Madison, WI 53726, USA; [email protected] * Correspondence: [email protected] Simple Summary: Carpenter ants are important to ecosystem services as they assist in the breakdown of course woody debris when excavating wood for nests. Feeding on a variety of carbohydrate and protein sources, they have an infrabuccal filter that limits passage of large food particles to their gut. A variety of yeasts have been found associated with the infrabuccal pocket and the nests of these ants. The yeast Schwanniomyces polymorphus is associated with the carpenter ant Camponotus vicinus. To examine a possible nutritional association between this yeast and ant, we reared small sub-colonies of defaunated and non-defaunated C. vincus brood on several artificial diets where various nutritional components were removed. Part of the testing involved exposure of brood to these diets and cells of S. polymorphus. Dietary treatments that were augmented with yeast generally had deleterious Citation: Mankowski, M.E.; Morrell, J.J.; effects on brood development compared to diets without yeast. However, increased brood weight Lebow, P.K. Effects on Brood and increased number of adult ants from initial brood was observed in non-defaunated ants fed a Development in the Carpenter Ant diet where B vitamins and sterols were absent, but augmented with live yeast. -
Digging Deeper Into the Ecology of Subterranean Ants: Diversity and Niche Partitioning Across Two Continents
diversity Article Digging Deeper into the Ecology of Subterranean Ants: Diversity and Niche Partitioning across Two Continents Mickal Houadria * and Florian Menzel Institute of Organismic and Molecular Evolution, Johannes-Gutenberg-University Mainz, Hanns-Dieter-Hüsch-Weg 15, 55128 Mainz, Germany; [email protected] * Correspondence: [email protected] Abstract: Soil fauna is generally understudied compared to above-ground arthropods, and ants are no exception. Here, we compared a primary and a secondary forest each on two continents using four different sampling methods. Winkler sampling, pitfalls, and four types of above- and below-ground baits (dead, crushed insects; melezitose; living termites; living mealworms/grasshoppers) were applied on four plots (4 × 4 grid points) on each site. Although less diverse than Winkler samples and pitfalls, subterranean baits provided a remarkable ant community. Our baiting system provided a large dataset to systematically quantify strata and dietary specialisation in tropical rainforest ants. Compared to above-ground baits, 10–28% of the species at subterranean baits were overall more common (or unique to) below ground, indicating a fauna that was truly specialised to this stratum. Species turnover was particularly high in the primary forests, both concerning above-ground and subterranean baits and between grid points within a site. This suggests that secondary forests are more impoverished, especially concerning their subterranean fauna. Although subterranean ants rarely displayed specific preferences for a bait type, they were in general more specialised than above-ground ants; this was true for entire communities, but also for the same species if they foraged in both strata. Citation: Houadria, M.; Menzel, F. -
Table S4. Phylogenetic Distribution of Bacterial and Archaea Genomes in Groups A, B, C, D, and X
Table S4. Phylogenetic distribution of bacterial and archaea genomes in groups A, B, C, D, and X. Group A a: Total number of genomes in the taxon b: Number of group A genomes in the taxon c: Percentage of group A genomes in the taxon a b c cellular organisms 5007 2974 59.4 |__ Bacteria 4769 2935 61.5 | |__ Proteobacteria 1854 1570 84.7 | | |__ Gammaproteobacteria 711 631 88.7 | | | |__ Enterobacterales 112 97 86.6 | | | | |__ Enterobacteriaceae 41 32 78.0 | | | | | |__ unclassified Enterobacteriaceae 13 7 53.8 | | | | |__ Erwiniaceae 30 28 93.3 | | | | | |__ Erwinia 10 10 100.0 | | | | | |__ Buchnera 8 8 100.0 | | | | | | |__ Buchnera aphidicola 8 8 100.0 | | | | | |__ Pantoea 8 8 100.0 | | | | |__ Yersiniaceae 14 14 100.0 | | | | | |__ Serratia 8 8 100.0 | | | | |__ Morganellaceae 13 10 76.9 | | | | |__ Pectobacteriaceae 8 8 100.0 | | | |__ Alteromonadales 94 94 100.0 | | | | |__ Alteromonadaceae 34 34 100.0 | | | | | |__ Marinobacter 12 12 100.0 | | | | |__ Shewanellaceae 17 17 100.0 | | | | | |__ Shewanella 17 17 100.0 | | | | |__ Pseudoalteromonadaceae 16 16 100.0 | | | | | |__ Pseudoalteromonas 15 15 100.0 | | | | |__ Idiomarinaceae 9 9 100.0 | | | | | |__ Idiomarina 9 9 100.0 | | | | |__ Colwelliaceae 6 6 100.0 | | | |__ Pseudomonadales 81 81 100.0 | | | | |__ Moraxellaceae 41 41 100.0 | | | | | |__ Acinetobacter 25 25 100.0 | | | | | |__ Psychrobacter 8 8 100.0 | | | | | |__ Moraxella 6 6 100.0 | | | | |__ Pseudomonadaceae 40 40 100.0 | | | | | |__ Pseudomonas 38 38 100.0 | | | |__ Oceanospirillales 73 72 98.6 | | | | |__ Oceanospirillaceae -
Borowiec Et Al-2020 Ants – Phylogeny and Classification
A Ants: Phylogeny and 1758 when the Swedish botanist Carl von Linné Classification published the tenth edition of his catalog of all plant and animal species known at the time. Marek L. Borowiec1, Corrie S. Moreau2 and Among the approximately 4,200 animals that he Christian Rabeling3 included were 17 species of ants. The succeeding 1University of Idaho, Moscow, ID, USA two and a half centuries have seen tremendous 2Departments of Entomology and Ecology & progress in the theory and practice of biological Evolutionary Biology, Cornell University, Ithaca, classification. Here we provide a summary of the NY, USA current state of phylogenetic and systematic 3Social Insect Research Group, Arizona State research on the ants. University, Tempe, AZ, USA Ants Within the Hymenoptera Tree of Ants are the most ubiquitous and ecologically Life dominant insects on the face of our Earth. This is believed to be due in large part to the cooperation Ants belong to the order Hymenoptera, which also allowed by their sociality. At the time of writing, includes wasps and bees. ▶ Eusociality, or true about 13,500 ant species are described and sociality, evolved multiple times within the named, classified into 334 genera that make up order, with ants as by far the most widespread, 17 subfamilies (Fig. 1). This diversity makes the abundant, and species-rich lineage of eusocial ants the world’s by far the most speciose group of animals. Within the Hymenoptera, ants are part eusocial insects, but ants are not only diverse in of the ▶ Aculeata, the clade in which the ovipos- terms of numbers of species. -
Hemiptera: Adelgidae)
The ISME Journal (2012) 6, 384–396 & 2012 International Society for Microbial Ecology All rights reserved 1751-7362/12 www.nature.com/ismej ORIGINAL ARTICLE Bacteriocyte-associated gammaproteobacterial symbionts of the Adelges nordmannianae/piceae complex (Hemiptera: Adelgidae) Elena R Toenshoff1, Thomas Penz1, Thomas Narzt2, Astrid Collingro1, Stephan Schmitz-Esser1,3, Stefan Pfeiffer1, Waltraud Klepal2, Michael Wagner1, Thomas Weinmaier4, Thomas Rattei4 and Matthias Horn1 1Department of Microbial Ecology, University of Vienna, Vienna, Austria; 2Core Facility, Cell Imaging and Ultrastructure Research, University of Vienna, Vienna, Austria; 3Department of Veterinary Public Health and Food Science, Institute for Milk Hygiene, Milk Technology and Food Science, University of Veterinary Medicine Vienna, Vienna, Austria and 4Department of Computational Systems Biology, University of Vienna, Vienna, Austria Adelgids (Insecta: Hemiptera: Adelgidae) are known as severe pests of various conifers in North America, Canada, Europe and Asia. Here, we present the first molecular identification of bacteriocyte-associated symbionts in these plant sap-sucking insects. Three geographically distant populations of members of the Adelges nordmannianae/piceae complex, identified based on coI and ef1alpha gene sequences, were investigated. Electron and light microscopy revealed two morphologically different endosymbionts, coccoid or polymorphic, which are located in distinct bacteriocytes. Phylogenetic analyses of their 16S and 23S rRNA gene sequences assigned both symbionts to novel lineages within the Gammaproteobacteria sharing o92% 16S rRNA sequence similarity with each other and showing no close relationship with known symbionts of insects. Their identity and intracellular location were confirmed by fluorescence in situ hybridization, and the names ‘Candidatus Steffania adelgidicola’ and ‘Candidatus Ecksteinia adelgidicola’ are proposed for tentative classification. -
Space, Habitat and Isolation Are the Key Determinants of Tree Colonization by the Carpenter Ant in Plantation Forests
Article Space, Habitat and Isolation are the Key Determinants of Tree Colonization by the Carpenter Ant in Plantation Forests Adam Véle 1,2 and Jakub Horák 1,3,* 1 Department of Forest Protection and Entomology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Kamýcká 1176, CZ-165 21 Prague, Czech Republic 2 Forestry & Game Management Research Institute, Strnady 136, CZ-252 02 Jílovištˇe,Czech Republic 3 Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského 62, CZ-500 03 Hradec Králové, Czech Republic * Correspondence: [email protected] Received: 27 June 2019; Accepted: 25 July 2019; Published: 27 July 2019 Abstract: Forest plantations are still often considered the antithesis of real nature. However, plantations can host many organisms. The problem is that some of the hosted species are regarded ad hoc as pests. The main aim of our paper was to study the carpenter ant (Camponotus ligniperdus) in windstorm habitats. We studied forests in East Bohemia, Czech Republic, and focused on the spatial distribution of snapped trees and the influence of selected forest characteristics on the incidence of ant nests. We found that the nests in the study area mainly occurred in Norway spruce, which is the most commercially important tree in the majority of Central Europe. More than one quarter of the snapped trees were inhabited by the ants. We found that nests exhibited a spatially autocorrelated pattern that differed on spatial scales. The most important characteristic of the host tree for determining carpenter ant nests was the presence of brown rot, and the majority of tree nests were isolated from forest openings. -
Effects on Brood Development in the Carpenter Ant Camponotus Vicinus Mayr After Exposure to the Yeast Associate Schwanniomyces Polymorphus Kloecker
insects Article Effects on Brood Development in the Carpenter Ant Camponotus vicinus Mayr after Exposure to the Yeast Associate Schwanniomyces polymorphus Kloecker Mark E. Mankowski 1,*, Jeffrey J. Morrell 2 and Patricia K. Lebow 3 1 Forest Products Laboratory Starkville, USDA Forest Service, Starkville, MS 39759, USA 2 Centre Timber Durability and Design Life, University of the Sunshine Coast, Sippy Downs, QLD 4102, Australia; [email protected] 3 Forest Products Laboratory Madison, USDA Forest Service, Madison, WI 53726, USA; [email protected] * Correspondence: [email protected] Simple Summary: Carpenter ants are important to ecosystem services as they assist in the breakdown of course woody debris when excavating wood for nests. Feeding on a variety of carbohydrate and protein sources, they have an infrabuccal flter that limits passage of large food particles to their gut. A variety of yeasts have been found associated with the infrabuccal pocket and the nests of these ants. The yeast Schwanniomyces polymorphus is associated with the carpenter ant Camponotus vicinus. To examine a possible nutritional association between this yeast and ant, we reared small sub-colonies of defaunated and non-defaunated C. vincus brood on several artifcial diets where various nutritional components were removed. Part of the testing involved exposure of brood to these diets and cells of S. polymorphus. Dietary treatments that were augmented with yeast generally had deleterious Citation: Mankowski, M.E.; Morrell, J.J.; effects on brood development compared to diets without yeast. However, increased brood weight Lebow, P.K. Effects on Brood and increased number of adult ants from initial brood was observed in non-defaunated ants fed a Development in the Carpenter Ant diet where B vitamins and sterols were absent, but augmented with live yeast. -
An Inventory of Nepal's Insects
An Inventory of Nepal's Insects Volume III (Hemiptera, Hymenoptera, Coleoptera & Diptera) V. K. Thapa An Inventory of Nepal's Insects Volume III (Hemiptera, Hymenoptera, Coleoptera& Diptera) V.K. Thapa IUCN-The World Conservation Union 2000 Published by: IUCN Nepal Copyright: 2000. IUCN Nepal The role of the Swiss Agency for Development and Cooperation (SDC) in supporting the IUCN Nepal is gratefully acknowledged. The material in this publication may be reproduced in whole or in part and in any form for education or non-profit uses, without special permission from the copyright holder, provided acknowledgement of the source is made. IUCN Nepal would appreciate receiving a copy of any publication, which uses this publication as a source. No use of this publication may be made for resale or other commercial purposes without prior written permission of IUCN Nepal. Citation: Thapa, V.K., 2000. An Inventory of Nepal's Insects, Vol. III. IUCN Nepal, Kathmandu, xi + 475 pp. Data Processing and Design: Rabin Shrestha and Kanhaiya L. Shrestha Cover Art: From left to right: Shield bug ( Poecilocoris nepalensis), June beetle (Popilla nasuta) and Ichneumon wasp (Ichneumonidae) respectively. Source: Ms. Astrid Bjornsen, Insects of Nepal's Mid Hills poster, IUCN Nepal. ISBN: 92-9144-049 -3 Available from: IUCN Nepal P.O. Box 3923 Kathmandu, Nepal IUCN Nepal Biodiversity Publication Series aims to publish scientific information on biodiversity wealth of Nepal. Publication will appear as and when information are available and ready to publish. List of publications thus far: Series 1: An Inventory of Nepal's Insects, Vol. I. Series 2: The Rattans of Nepal. -
BMC Biology Biomed Central
BMC Biology BioMed Central Research article Open Access Nutritional upgrading for omnivorous carpenter ants by the endosymbiont Blochmannia Heike Feldhaar*1, Josef Straka1, Markus Krischke2, Kristina Berthold1, Sascha Stoll3, Martin J Mueller2 and Roy Gross3 Address: 1Department of Behavioural Physiology and Sociobiology (Zoology II), Biocenter, University of Wuerzburg, Am Hubland, 97074 Wuerzburg, Germany, 2Department of Pharmaceutical Biology, Julius-von-Sachs-Institute for Biosciences, Biocenter, University of Wuerzburg, Julius-von-Sachs-Platz 2, 97082 Wuerzburg, Germany and 3Department of Microbiology, Biocenter, University of Wuerzburg, Am Hubland, 97074 Würzburg, Germany Email: Heike Feldhaar* - [email protected]; Josef Straka - [email protected]; Markus Krischke - [email protected]; Kristina Berthold - [email protected]; Sascha Stoll - [email protected] wuerzburg.de; Martin J Mueller - [email protected]; Roy Gross - [email protected] * Corresponding author Published: 30 October 2007 Received: 3 May 2007 Accepted: 30 October 2007 BMC Biology 2007, 5:48 doi:10.1186/1741-7007-5-48 This article is available from: http://www.biomedcentral.com/1741-7007/5/48 © 2007 Feldhaar et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Carpenter ants (genus Camponotus) are considered to be omnivores. Nonetheless, the genome sequence of Blochmannia floridanus, the obligate intracellular endosymbiont of Camponotus floridanus, suggests a function in nutritional upgrading of host resources by the bacterium. -
Diversity of Bacteria in Ants (Hymenoptera: Formicidae) from Canopy and Understory of Selected Trees at Mount Makiling Forest Reserve, Laguna, Philippines
Philippine Journal of Science 150 (3): 753-763, June 2021 ISSN 0031 - 7683 Date Received: 30 Sep 2020 Diversity of Bacteria in Ants (Hymenoptera: Formicidae) from Canopy and Understory of Selected Trees at Mount Makiling Forest Reserve, Laguna, Philippines Michael P. Gatpatan1, Mia Beatriz C. Amoranto1, Alfredo Jose C. Ballesteros3, Noel G. Sabino1, Jocelyn T. Zarate2, Ma. Anita M. Bautista3, and Lucille C. Villegas1* 1Microbiology Division, Institute of Biological Sciences 2National Institute of Molecular Biology and Biotechnology (BIOTECH) University of the Philippines Los Baños, College, Laguna 4031 Philippines 3National Institute of Molecular Biology and Biotechnology (NIMBB) University of the Philippines Diliman, Quezon City 1101 Philippines The Mount Makiling Forest Reserve (MMFR) is a biodiversity hotspot and listed as one of the 170 conservation priority areas established by the Philippine government. Its flora and fauna diversity has been reported, but knowledge gap has been identified concerning the bacterial communities associated with the flora and fauna. This study focused on ants (Hymenoptera: Formicidae), which are dominant in forest canopy and play essential roles in the ecosystem functionality. A metagenomic sequencing approach based on amplified V3–V4 regions of the 16S rRNA was employed to investigate the bacterial communities associated with five arboreal ant species collected from MMFR. The collected ants were identified as Dolichoderus thoracicus, Myrmicaria sp., Colobopsis leonardi, Polyrhachis mindanaensis, and Polyrhachis semiinermis. The sequence analyses revealed that Proteobacteria, Spirochaetes, Firmicutes, Bacteroides, and Actinobacteria were the most abundant phyla. Individual analysis of the bacterial genera associated with the five ant species showed that unclassified members of Rhizobiaceae, Orbaceae, and Burkholderiaceae were dominant in D. -
Fossil Ants (Hymenoptera: Formicidae): Ancient Diversity and the Rise of Modern Lineages
Myrmecological News 24 1-30 Vienna, March 2017 Fossil ants (Hymenoptera: Formicidae): ancient diversity and the rise of modern lineages Phillip BARDEN Abstract The ant fossil record is summarized with special reference to the earliest ants, first occurrences of modern lineages, and the utility of paleontological data in reconstructing evolutionary history. During the Cretaceous, from approximately 100 to 78 million years ago, only two species are definitively assignable to extant subfamilies – all putative crown group ants from this period are discussed. Among the earliest ants known are unexpectedly diverse and highly social stem- group lineages, however these stem ants do not persist into the Cenozoic. Following the Cretaceous-Paleogene boun- dary, all well preserved ants are assignable to crown Formicidae; the appearance of crown ants in the fossil record is summarized at the subfamilial and generic level. Generally, the taxonomic composition of Cenozoic ant fossil communi- ties mirrors Recent ecosystems with the "big four" subfamilies Dolichoderinae, Formicinae, Myrmicinae, and Ponerinae comprising most faunal abundance. As reviewed by other authors, ants increase in abundance dramatically from the Eocene through the Miocene. Proximate drivers relating to the "rise of the ants" are discussed, as the majority of this increase is due to a handful of highly dominant species. In addition, instances of congruence and conflict with molecular- based divergence estimates are noted, and distinct "ghost" lineages are interpreted. The ant fossil record is a valuable resource comparable to other groups with extensive fossil species: There are approximately as many described fossil ant species as there are fossil dinosaurs. The incorporation of paleontological data into neontological inquiries can only seek to improve the accuracy and scale of generated hypotheses.