L-Erythrulose Production by Oxidative Fermentation Is Catalyzed by PQQ-Containing Membrane-Bound Dehydrogenase
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Xylose Fermentation to Ethanol by Schizosaccharomyces Pombe Clones with Xylose Isomerase Gene." Biotechnology Letters (8:4); Pp
NREL!TP-421-4944 • UC Category: 246 • DE93000067 l I Xylose Fermenta to Ethanol: A R ew '.) i I, -- , ) )I' J. D. McMillan I ' J.( .!i �/ .6' ....� .T u�.•ls:l ., �-- • National Renewable Energy Laboratory II 'J 1617 Cole Boulevard Golden, Colorado 80401-3393 A Division of Midwest Research Institute Operated for the U.S. Department of Energy under Contract No. DE-AC02-83CH10093 Prepared under task no. BF223732 January 1993 NOTICE This report was prepared as an account of work sponsored by an agency of the United States government. Neither the United States government nor any agency thereof, nor any of their employees, makes any warranty, express or implied, or assumes any legal liability or responsibility for the accuracy, com pleteness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights. Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily con stitute or imply its endorsement, recommendation, or favoring by the United States government or any agency thereof. The views and opinions of authors expressed herein do not necessarily state or reflect those of the United States government or any agency thereof. Printed in the United States of America Available from: National Technical Information Service U.S. Department of Commerce 5285 Port Royal Road Springfield, VA22161 Price: Microfiche A01 Printed Copy A03 Codes are used for pricing all publications. The code is determined by the number of pages in the publication. Information pertaining to the pricing codes can be found in the current issue of the following publications which are generally available in most libraries: Energy Research Abstracts (ERA); Govern ment Reports Announcements and Index ( GRA and I); Scientific and Technical Abstract Reports(STAR); and publication NTIS-PR-360 available from NTIS at the above address. -
Lecture 7 - the Calvin Cycle and the Pentose Phosphate Pathway
Lecture 7 - The Calvin Cycle and the Pentose Phosphate Pathway Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire 1 Introduction The Calvin cycle Text The dark reactions of photosynthesis in green plants Reduces carbon from CO2 to hexose (C6H12O6) Requires ATP for free energy and NADPH as a reducing agent. 2 2 Introduction NADH versus Text NADPH 3 3 Introduction The Pentose Phosphate Pathway Used in all organisms Glucose is oxidized and decarboxylated to produce reduced NADPH Used for the synthesis and degradation of pentoses Shares reactions with the Calvin cycle 4 4 1. The Calvin Cycle Source of carbon is CO2 Text Takes place in the stroma of the chloroplasts Comprises three stages Fixation of CO2 by ribulose 1,5-bisphosphate to form two 3-phosphoglycerate molecules Reduction of 3-phosphoglycerate to produce hexose sugars Regeneration of ribulose 1,5-bisphosphate 5 5 1. Calvin Cycle Three stages 6 6 1.1 Stage I: Fixation Incorporation of CO2 into 3-phosphoglycerate 7 7 1.1 Stage I: Fixation Rubisco: Ribulose 1,5- bisphosphate carboxylase/ oxygenase 8 8 1.1 Stage I: Fixation Active site contains a divalent metal ion 9 9 1.2 Rubisco Oxygenase Activity Rubisco also catalyzes a wasteful oxygenase reaction: 10 10 1.3 State II: Formation of Hexoses Reactions similar to those of gluconeogenesis But they take place in the chloroplasts And use NADPH instead of NADH 11 11 1.3 State III: Regeneration of Ribulose 1,5-Bisphosphosphate Involves a sequence of transketolase and aldolase reactions. 12 12 1.3 State III: -
48 3-1-4. Reactions Using Mutant FSA A129S Another Mutant Enzyme
Results _ 3-1-4. Reactions using mutant FSA A129S Another mutant enzyme, A129S, which has serine at 129th residue instead of alanine (Fig.3-11a), has high potential to catalyze the reactions using DHA as a donor substrate. Virtually, the kcat/Km value for DHA is more than 12 fold of that of WT (Schürmann, 2001). This implies that larger amounts of products can be acquired with A129S than with WT, or unfavorable reactions with WT may be accomplished with the mutant enzyme. Firstly, FSA A129S was produced in DH5α with pUC18 plasmid vector and purified with same method as WT was done (Fig.3-11b, Table 3-8). This mutant enzyme was overexpressed well and a strong band corresponding to FSA was seen on SDS-PAGE gel (as 10~15% of total protein in crude extract). In addition, this mutant enzyme held the stability against high temperature. Thus, a heat treatment step was part of the purification protocol. However, protein solution obtained from hydroxyapatite column of the final purification step showed still a few extra protein bands on SDS-PAGE gel (Fig.3-11b). Although it contained those extra proteins, the purity appeared to be more than 90% on the gel and the specific activity was quite high enough to assay the catalytic ability of the enzyme for several substrates. Indeed, even crude extract showed higher specific activity than purified WT had (Table 3-8). Three reactions (scheme 3-1) were probed to assay catalytic ability of both FSA WT and A129S. Dihydroxyacetone (DHA) or hydroxyacetone (HA) were used as donor substrates, and formaldehyde or glycolaldehyde as acceptor. -
Conversion of D-Ribulose 5-Phosphate to D-Xylulose 5-Phosphate: New Insights from Structural and Biochemical Studies on Human RPE
The FASEB Journal • Research Communication Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE Wenguang Liang,*,†,1 Songying Ouyang,*,1 Neil Shaw,* Andrzej Joachimiak,‡ Rongguang Zhang,* and Zhi-Jie Liu*,2 *National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; †Graduate University of Chinese Academy of Sciences, Beijing, China; and ‡Structural Biology Center, Argonne National Laboratory, Argonne, Illinois, USA ABSTRACT The pentose phosphate pathway (PPP) such as erythrose 4-phosphate, glyceraldehyde 3-phos- confers protection against oxidative stress by supplying phate, and fructose 6-phosphate that are necessary for NADPH necessary for the regeneration of glutathione, the synthesis of aromatic amino acids and production which detoxifies H2O2 into H2O and O2. RPE functions of energy (Fig. 1) (3, 4). In addition, a majority of the in the PPP, catalyzing the reversible conversion of NADPH used by the human body for biosynthetic D-ribulose 5-phosphate to D-xylulose 5-phosphate and is purposes is supplied by the PPP (5). Interestingly, RPE an important enzyme for cellular response against has been shown to protect cells from oxidative stress via oxidative stress. Here, using structural, biochemical, its participation in PPP for the production of NADPH and functional studies, we show that human D-ribulose (6–8). The protection against reactive oxygen species is ؉ 5-phosphate 3-epimerase (hRPE) uses Fe2 for cataly- exerted by NADPH’s ability to reduce glutathione, sis. Structures of the binary complexes of hRPE with which detoxifies H2O2 into H2O (Fig. 1). -
Carbohydrates: Structure and Function
CARBOHYDRATES: STRUCTURE AND FUNCTION Color index: . Very important . Extra Information. “ STOP SAYING I WISH, START SAYING I WILL” 435 Biochemistry Team *هذا العمل ﻻ يغني عن المصدر المذاكرة الرئيسي • The structure of carbohydrates of physiological significance. • The main role of carbohydrates in providing and storing of energy. • The structure and function of glycosaminoglycans. OBJECTIVES: 435 Biochemistry Team extra information that might help you 1-synovial fluid: - It is a viscous, non-Newtonian fluid found in the cavities of synovial joints. - the principal role of synovial fluid is to reduce friction between the articular cartilage of synovial joints during movement O 2- aldehyde = terminal carbonyl group (RCHO) R H 3- ketone = carbonyl group within (inside) the compound (RCOR’) 435 Biochemistry Team the most abundant organic molecules in nature (CH2O)n Carbohydrates Formula *hydrate of carbon* Function 1-provides important part of energy Diseases caused by disorders of in diet . 2-Acts as the storage form of energy carbohydrate metabolism in the body 3-structural component of cell membrane. 1-Diabetesmellitus. 2-Galactosemia. 3-Glycogen storage disease. 4-Lactoseintolerance. 435 Biochemistry Team Classification of carbohydrates monosaccharides disaccharides oligosaccharides polysaccharides simple sugar Two monosaccharides 3-10 sugar units units more than 10 sugar units Joining of 2 monosaccharides No. of carbon atoms Type of carbonyl by O-glycosidic bond: they contain group they contain - Maltose (α-1, 4)= glucose + glucose -Sucrose (α-1,2)= glucose + fructose - Lactose (β-1,4)= glucose+ galactose Homopolysaccharides Heteropolysaccharides Ketone or aldehyde Homo= same type of sugars Hetero= different types Ketose aldose of sugars branched unBranched -Example: - Contains: - Contains: Examples: aldehyde group glycosaminoglycans ketone group. -
United States Patent Office
- 2,926,180 United States Patent Office Patented Feb. 23, 1960 2 cycloalkyl, etc. These substituents R and R' may also be substituted with various groupings such as carboxyl 2,926,180 groups, sulfo groups, halogen atoms, etc. Examples of CONDENSATION OF AROMATIC KETONES WITH compounds which are included within the scope of this CARBOHYDRATES AND RELATED MATER ALS 5 general formula are acetophenone, propiophenone, benzo Carl B. Linn, Riverside, Ill., assignor, by mesne assign phenone, acetomesitylene, phenylglyoxal, benzylaceto ments, to Universal Oil Products Company, Des phenone, dypnone, dibenzoylmethane, benzopinacolone, Plaines, Ill., a corporation of Delaware dimethylaminobenzophenone, acetonaphthalene, benzoyl No Drawing. Application June 18, 1957 naphthalene, acetonaphthacene, benzoylnaphthacene, ben 10 zil, benzilacetophenone, ortho-hydroxyacetophenone, para Serial No. 666,489 hydroxyacetophenone, ortho - hydroxy-para - methoxy 5 Claims. (C. 260-345.9) acetophenone, para-hydroxy-meta-methoxyacetophenone, zingerone, etc. This application is a continuation-in-part of my co Carbohydrates which are condensed with aromatic pending application Serial No. 401,068, filed December 5 ketones to form a compound selected from the group 29, 1953, now Patent No. 2,798,079. consisting of an acylaryl-desoxy-alditol and an acylaryl This invention relates to a process for interacting aro desoxy-ketitol include simple sugars, their desoxy- and matic ketones with carbohydrates and materials closely omega-carboxy derivatives, compound sugars or oligo related to carbohydrates. The process relates more par saccharides, and polysaccharides. ticularly to the condensation of simple sugars, their 20 Simple sugars include dioses, trioses, tetroses, pentoses, desoxy- and their omega-carboxy derivatives, compound hexoses, heptoses, octoses, nonoses, and decoses. Com sugars or oligosaccharides, and polysaccharides with aro pound sugars include disaccharides, trisaccharides, and matic ketones in the presence of a hydrogen fluoride tetrasaccharides. -
Assessment of DHA in Self-Tanning Creams Applied in Spray Booths
Assessment of DHA in self-tanning creams applied in spray booths Lena Höglund MSc. DTC (Danish Toxicology Centre): Betty Bügel Mogensen Rossana Bossi Marianne Glasius National Environmental Research Institute of Denmark Survey of Chemical Substances in Consumer Products, No. 72 2006 The Danish Environmental Protection Agency will, when opportunity offers, publish reports and contributions relating to environmental research and development projects financed via the Danish EPA. Please note that publication does not signify that the contents of the reports necessarily reflect the views of the Danish EPA. The reports are, however, published because the Danish EPA finds that the studies represent a valuable contribution to the debate on environmental policy in Denmark. Contents SUMMARY AND CONCLUSIONS 5 1 INTRODUCTION 7 2 OBJECTIVES 10 3 TECHNIQUES 12 3.1 DESCRIPTION OF TECHNIQUES 12 3.1.1 Manual turbine spray 12 3.1.2 Third-generation booths (closed booths) 13 3.1.3 Fourth-generation booths (open booths) 15 3.2 SAFETY INSTRUCTIONS 16 3.2.1 General remarks on enterprises' safety instructions 16 3.2.2 Safety instructions from the authorities 16 3.2.3 Advice for customers from personnel 16 4 SUBSTANCES CONTAINED IN PRODUCTS 20 5 HEALTH ASSESSMENT 22 5.1 TOXOCOLOGICAL PROFILE OF DIHYDROXYACETONE (DHA) (CAS NO. 96-26-4) 22 5.2 BRIEF HEALTH ASSESSMENT OF ETHOXYDIGLYCOL (CAS NO. 111-90-0) 26 5.3 BRIEF HEALTH ASSESSMENT OF PHENOXYETHANOL (CAS NO.122-99-6) 27 5.4 BRIEF HEALTH ASSESSMENT OF GLYCERINE (CAS NO. 56-81-5) 27 5.5 BRIEF HEALTH ASSESSMENT OF POLYSORBATES AND SORBITAN ESTERS 27 5.6 BRIEF HEALTH ASSESSMENT OF ERYTHRULOSE (CAS NO. -
Unit 1: Carbohydrates Structure and Biological Importance: Monosaccharides, Disaccharides, Polysaccharides and Glycoconjugates
CBCS 3rd Semester Core Course VII Paper: Fundamentals of Biochemistry Unit 1: Carbohydrates Structure and Biological importance: Monosaccharides, Disaccharides, Polysaccharides and Glycoconjugates By- Dr. Luna Phukan Definition The carbohydrates are a group of naturally occurring carbonyl compounds (aldehydes or ketones) that also contain several hydroxyl groups. It may also include their derivatives which produce such compounds on hydrolysis. They are the most abundant organic molecules in nature and also referred to as “saccharides”. The carbohydrates which are soluble in water and sweet in taste are called as “sugars”. Structure of Carbohydrates Carbohydrates consist of carbon, hydrogen, and oxygen. The general empirical structure for carbohydrates is (CH2O)n. They are organic compounds organized in the form of aldehydes or ketones with multiple hydroxyl groups coming off the carbon chain. The building blocks of all carbohydrates are simple sugars called monosaccharides. A monosaccharide can be a polyhydroxy aldehyde (aldose) or a polyhydroxy ketone (ketose) The carbohydrates can be structurally represented in any of the three forms: 1. Open chain structure. 2. Hemi-acetal structure. 3. Haworth structure. Open chain structure – It is the long straight-chain form of carbohydrates. Hemi-acetal structure – Here the 1st carbon of the glucose condenses with the -OH group of the 5th carbon to form a ring structure. Haworth structure – It is the presence of the pyranose ring structure Classification of Carbohydrates Monosaccharides The simple carbohydrates include single sugars (monosaccharides) and polymers, oligosaccharides, and polysaccharides. Simplest group of carbohydrates and often called simple sugars since they cannot be further hydrolyzed. Colorless, crystalline solid which are soluble in water and insoluble in a non-polar solvent. -
PENTOSE PHOSPHATE PATHWAY — Restricted for Students Enrolled in MCB102, UC Berkeley, Spring 2008 ONLY
Metabolism Lecture 5 — PENTOSE PHOSPHATE PATHWAY — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY Bryan Krantz: University of California, Berkeley MCB 102, Spring 2008, Metabolism Lecture 5 Reading: Ch. 14 of Principles of Biochemistry, “Glycolysis, Gluconeogenesis, & Pentose Phosphate Pathway.” PENTOSE PHOSPHATE PATHWAY This pathway produces ribose from glucose, and it also generates 2 NADPH. Two Phases: [1] Oxidative Phase & [2] Non-oxidative Phase + + Glucose 6-Phosphate + 2 NADP + H2O Ribose 5-Phosphate + 2 NADPH + CO2 + 2H ● What are pentoses? Why do we need them? ◦ DNA & RNA ◦ Cofactors in enzymes ● Where do we get them? Diet and from glucose (and other sugars) via the Pentose Phosphate Pathway. ● Is the Pentose Phosphate Pathway just about making ribose sugars from glucose? (1) Important for biosynthetic pathways using NADPH, and (2) a high cytosolic reducing potential from NADPH is sometimes required to advert oxidative damage by radicals, e.g., ● - ● O2 and H—O Metabolism Lecture 5 — PENTOSE PHOSPHATE PATHWAY — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY Two Phases of the Pentose Pathway Metabolism Lecture 5 — PENTOSE PHOSPHATE PATHWAY — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY NADPH vs. NADH Metabolism Lecture 5 — PENTOSE PHOSPHATE PATHWAY — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY Oxidative Phase: Glucose-6-P Ribose-5-P Glucose 6-phosphate dehydrogenase. First enzymatic step in oxidative phase, converting NADP+ to NADPH. Glucose 6-phosphate + NADP+ 6-Phosphoglucono-δ-lactone + NADPH + H+ Mechanism. Oxidation reaction of C1 position. Hydride transfer to the NADP+, forming a lactone, which is an intra-molecular ester. -
Continuous Production of Erythrulose Using Transketolase in a Membrane Reactor Jÿrgen Bongs, Doris Hahn, Ulrich Schšrken, Georg A
Biotechnology Letters, Vol 19, No 3, March 1997, pp. 213–215 1 Continuous production of erythrulose using transketolase in a membrane reactor JŸrgen Bongs, Doris Hahn, Ulrich Schšrken, Georg A. Sprenger, 1 Udo Kragl* and Christian Wandrey Institut fŸr Biotechnologie, Forschungszentrum JŸlich GmbH, D-52425 JŸlich, Germany Transketolase can be used for synthesis of chiral intermediates and carbohydrates. However the enzyme is strongly deactivated by the educts. This deactivation depends on the reactor employed. An enzyme membrane reactor allows the continuous production of L-erythrulose with high conversion and stable operational points. A productivity (space- time yield) of 45 g LÐ1 dÐ1 was reached. 24 pts min base to base from Key words to line 1 of text 1 Introduction (10 mM), thiaminpyrophosphate (0.5 mM) and DTT (1 Transketolase (E.C. 2.2.1.1.) is used for the asymmetric mM). The substrate concentration of glycolaldehyde was synthesis of natural substances or their precursors 50 mM, the product concentration of L-erythrulose was such as carbohydrates (Drueckhammer et al., 1991), (+)- 50 mM, each compound dissolved in the liquid buffer exo-brevicomin (Myles et al., 1991), or fagomine system. Other reaction conditions were: pH = 7.0; (Effenberger and Null, 1992). In vivo transketolase cata- T = 25°C. lyses the reversible transfer of a two-carbon ketol moiety from a ketose to an aldose. When b-hydroxypyruvate Repetitive batch (HPA) is used as the donor substrate the reaction The reaction was performed in a commercially available becomes irreversible (Bolte et al., 1987) (Figure 1) even stirred ultrafiltration cell (Amicon) equipped with an 1 though there is a wide range of possible acceptor UF-membrane (Amicon) with a cut-off of 10 kDa. -
Production of Natural and Rare Pentoses Using Microorganisms and Their Enzymes
EJB Electronic Journal of Biotechnology ISSN: 0717-3458 Vol.4 No.2, Issue of August 15, 2001 © 2001 by Universidad Católica de Valparaíso -- Chile Received April 24, 2001 / Accepted July 17, 2001 REVIEW ARTICLE Production of natural and rare pentoses using microorganisms and their enzymes Zakaria Ahmed Food Science and Biochemistry Division Faculty of Agriculture, Kagawa University Kagawa 761-0795, Kagawa-Ken, Japan E-mail: [email protected] Financial support: Ministry of Education, Science, Sports and Culture of Japan under scholarship program for foreign students. Keywords: enzyme, microorganism, monosaccharides, pentose, rare sugar. Present address: Scientific Officer, Microbiology and Biochemistry Division, Bangladesh Jute Research Institute, Shere-Bangla Nagar, Dhaka- 1207, Bangladesh. Tel: 880-2-8124920. Biochemical methods, usually microbial or enzymatic, murine tumors and making them useful for cancer treatment are suitable for the production of unnatural or rare (Morita et al. 1996; Takagi et al. 1996). Recently, monosaccharides. D-Arabitol was produced from D- researchers have found many important applications of L- glucose by fermentation with Candida famata R28. D- arabinose in medicine as well as in biological sciences. In a xylulose can also be produced from D-arabitol using recent investigation, Seri et al. (1996) reported that L- Acetobacter aceti IFO 3281 and D-lyxose was produced arabinose selectively inhibits intestinal sucrase activity in enzymatically from D-xylulose using L-ribose isomerase an uncompetitive manner and suppresses the glycemic (L-RI). Ribitol was oxidized to L-ribulose by microbial response after sucrose ingestion by such inhibition. bioconversion with Acetobacter aceti IFO 3281; L- Furthermore, Sanai et al. (1997) reported that L-arabinose ribulose was epimerized to L-xylulose by the enzyme D- is useful in preventing postprandial hyperglycemia in tagatose 3-epimerase and L-lyxose was produced by diabetic patients. -
Erythritol As Sweetener—Wherefrom and Whereto?
Applied Microbiology and Biotechnology (2018) 102:587–595 https://doi.org/10.1007/s00253-017-8654-1 MINI-REVIEW Erythritol as sweetener—wherefrom and whereto? K. Regnat1 & R. L. Mach1 & A. R. Mach-Aigner1 Received: 1 September 2017 /Revised: 12 November 2017 /Accepted: 13 November 2017 /Published online: 1 December 2017 # The Author(s) 2017. This article is an open access publication Abstract Erythritol is a naturally abundant sweetener gaining more and more importance especially within the food industry. It is widely used as sweetener in calorie-reduced food, candies, or bakery products. In research focusing on sugar alternatives, erythritol is a key issue due to its, compared to other polyols, challenging production. It cannot be chemically synthesized in a commercially worthwhile way resulting in a switch to biotechnological production. In this area, research efforts have been made to improve concentration, productivity, and yield. This mini review will give an overview on the attempts to improve erythritol production as well as their development over time. Keywords Erythritol . Sugar alcohols . Polyols . Sweetener . Sugar . Sugar alternatives Introduction the range of optimization parameters. The other research di- rection focused on metabolic pathway engineering or genetic Because of today’s lifestyle, the number of people suffering engineering to improve yield and productivity as well as to from diabetes mellitus and obesity is increasing. The desire of allow the use of inexpensive and abundant substrates. This the customers to regain their health created a whole market of review will present the history of erythritol production- non-sugar and non-caloric or non-nutrient foods. An impor- related research from a more commercial viewpoint moving tant part of this market is the production of sugar alcohols, the towards sustainability and fundamental research.